Pre_GI Gene

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Host: NC_011745 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011745:3443371 Escherichia coli ED1a chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated in the 2000s from the faeces of a healthy man in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34433713443604234fragment of prepilin shufflon protein C-ter partQuickGO ontology
34436013443834234fragment of pilV protein Shufflon protein C-ter partQuickGO ontologyBLASTP
344388934450131125Shufflon-specific DNA recombinaseQuickGO ontologyBLASTP
34453323445484153hypothetical protein
34455743446395822hypothetical proteinBLASTP
344643734476871251putative plasmid transfer proteinQuickGO ontologyBLASTP
34525203452912393hypothetical proteinBLASTP
34532763453668393hypothetical proteinBLASTP
34537283454009282hypothetical protein
345399934557921794hypothetical proteinBLASTP
34559473456684738hypothetical proteinBLASTP
34568103457607798hypothetical proteinBLASTP
34576193458599981hypothetical proteinBLASTP
34586743459135462hypothetical protein
34591853459808624hypothetical protein
34595913460025435hypothetical proteinBLASTP
346006134611431083hypothetical proteinBLASTP
34611373461556420hypothetical proteinBLASTP
34616733462152480hypothetical protein
34622533462639387hypothetical proteinBLASTP
34632103463485276transposase ORF 1 IS1QuickGO ontologyBLASTP
34634043463907504transposase ORF2 IS1QuickGO ontologyBLASTP
34645213465216696hypothetical proteinBLASTP
34652513465523273hypothetical proteinBLASTP
34655233466230708hypothetical proteinBLASTP
34676423468058417hypothetical proteinBLASTP
3469375346963826450S ribosomal protein L31 type BQuickGO ontologyBLASTP
34697473469893147hypothetical protein
34700643470795732conjugal transfer surface exclusion protein TraTQuickGO ontologyBLASTP
347084334718471005putative Restriction enzyme subunit betaQuickGO ontologyBLASTP
347181634737051890putative Restriction enzyme subunit alphaQuickGO ontologyBLASTP
34750153475890876hypothetical proteinBLASTP