Pre_GI: BLASTP Hits

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Query: NC_014034:152264:173036 Rhodobacter capsulatus SB1003 chromosome, complete genome

Start: 173036, End: 174538, Length: 1503

Host Lineage: Rhodobacter capsulatus; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain is a derivative strain isolated in the laboratory of Barry Marrs from the classical progenitor strain B10. It is rifampicin-resistant, produces GTA, and is capable of growing under high illumination (resistant to photooxidative killing). Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to use photosynthesis and usually can grow under both anaerobic and aerobic conditions. This organism is a facultatively phototrophic purple non-sulfur bacterium and the type species of the Rhodobacter group. The colony's color depends largely on the amount of oxygen present in its environment. While it is able to produce cellular energy in a number of different ways, it can rely on anoxygenic photosynthesis under anaerobic conditions in the presence of light. Some strains produce the Gene Transfer Element (GTA), a pro-phage particle capable of transferring genetic material between strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013956:4627890:4627890462789046294341545Pantoea ananatis LMG 20103 chromosome, complete genomeNikA3e-131469
NC_010725:4035397:4058816405881640603811566Methylobacterium populi BJ001, complete genomeextracellular solute-binding protein family 52e-95350
NC_021150:5234000:5256649525664952581811533Azotobacter vinelandii CA6, complete genomeextracellular solute-binding protein6e-91335
NC_012560:5276000:5298757529875753002891533Azotobacter vinelandii DJ, complete genomeBacterial extracellular solute-binding protein, family 56e-91335
NC_014507:906960:9077559077559093321578Methanoplanus petrolearius DSM 11571 chromosome, complete genomeextracellular solute-binding protein family 59e-34145
NC_015573:1979202:1990426199042619919881563Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter periplasmic protein9e-32138
NC_014328:2467239:2472838247283824743881551Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative peptide ABC transporter periplasmic protein4e-30133
NC_014507:863210:8991498991499007201572Methanoplanus petrolearius DSM 11571 chromosome, complete genomeextracellular solute-binding protein family 52e-27124
NC_014002:31293:4612646126477121587Methanohalophilus mahii DSM 5219 chromosome, complete genomeextracellular solute-binding protein family 52e-26120
NC_014328:2467239:2476970247697024785261557Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative peptide ABC transporter periplasmic protein4e-26119
NC_018870:354164:3613953613953629481554Thermacetogenium phaeum DSM 12270 chromosome, complete genomeoligopeptide-binding protein AppA2e-24114
NC_012912:2553391:2553391255339125548991509Dickeya zeae Ech1591, complete genomeextracellular solute-binding protein family 52e-24114
NC_010424:422029:4220294220294235971569Candidatus Desulforudis audaxviator MP104C, complete genomeextracellular solute-binding protein, family 53e-23110
NC_015573:110108:1130731130731146381566Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter periplasmic protein5e-23109
NC_003454:24178:2834728347299271581Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeDipeptide-binding protein2e-22107
NC_003552:4782635:4801160480116048027521593Methanosarcina acetivorans C2A, complete genomeoligopeptide ABC transporter, solute-binding protein4e-22106
NC_013406:7092510:7093539709353970953081770Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 5 extracellular solute-binding protein2e-1997.8
NC_018870:2537350:2541625254162525431931569Thermacetogenium phaeum DSM 12270 chromosome, complete genomeheme-binding protein A3e-1997.1
NC_014622:5553628:5563315556331555648981584Paenibacillus polymyxa SC2 chromosome, complete genomepeptide ABC transporter substrate-binding protein2e-1894
NC_009380:1885024:1905186190518619067181533Salinispora tropica CNB-440 chromosome, complete genomeextracellular solute-binding protein1e-1791.3
NC_014654:1802007:1813478181347818150131536Halanaerobium sp. 'sapolanicus' chromosome, complete genomeextracellular solute-binding protein family 55e-1789.7
NC_015573:110108:1352311352311367721542Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter periplasmic protein5e-1789.7
NC_004741:4160500:4188238418823841898121575Shigella flexneri 2a str. 2457T, complete genomeperiplasmic binding protein for nickel7e-1789
NC_007952:3283394:3295692329569232972271536Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC nickel transporter, periplasmic ligand binding protein1e-1688.2
NC_014624:2368078:2392929239292923945331605Eubacterium limosum KIST612 chromosome, complete genomenickel ABC transporter2e-1687.4
NC_015312:6357469:6370262637026263718751614Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeABC transporter periplasmic subunit6e-1685.9
NC_009778:2951207:2953562295356229551571596Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-1685.5
NC_020260:3004500:3005779300577930073741596Cronobacter sakazakii Sp291, complete genomeextracellular solute-binding protein9e-1685.5
NC_016935:2503071:2511496251149625130941599Paenibacillus mucilaginosus 3016 chromosome, complete genomeABC transporter substrate-binding protein8e-1685.5
NC_015690:1967244:1980279198027919818771599Paenibacillus mucilaginosus KNP414 chromosome, complete genomeABC transporter substrate binding protein2e-1584.3
NC_015566:2957956:2974321297432129758291509Serratia sp. AS12 chromosome, complete genomeABC transporter periplasmic protein3e-1584
NC_011274:896802:8968028968028983401539Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91ABC transporter periplasmic binding protein3e-1584
NC_016831:2108557:2126743212674321282811539Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative ABC transporter periplasmic binding protein2e-1584
NC_015275:1480500:1482212148221214838491638Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, periplasmic subunit2e-1584
NC_003197:920000:9200059200059215431539Salmonella typhimurium LT2, complete genomeputative ABC transporter periplasmic binding protein3e-1583.6
NC_016810:919266:9192669192669208041539Salmonella enterica subsp. enterica serovar Typhimurium strputative ABC transporter periplasmic binding protein3e-1583.6
NC_016856:921057:9210579210579225951539Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative ABC transporter periplasmic binding protein3e-1583.6
NC_016857:919266:9192669192669208041539Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative ABC transporter periplasmic binding protein3e-1583.6
NC_016860:959609:9596099596099611471539Salmonella enterica subsp. enterica serovar Typhimurium strputative ABC transporter substrate binding protein3e-1583.6
NC_016863:920346:9203469203469218841539Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative ABC transporter periplasmic binding protein3e-1583.6
NC_017046:919249:9192499192499207871539Salmonella enterica subsp. enterica serovar Typhimurium str. 798ABC transporter substrate-binding protein3e-1583.6
NC_006905:946418:9464189464189479561539Salmonella enterica subsp. enterica serovar Choleraesuis strputative ABC transporter periplasmic binding protein3e-1583.6
NC_012125:894955:8949558949558964931539Salmonella enterica subsp. enterica serovar Paratyphi C strainABC transporter substrate-binding protein3e-1583.6
NC_004193:375416:4901834901834917721590Oceanobacillus iheyensis HTE831, complete genomeoligopeptide ABC transporter oligopeptide-binding protein3e-1583.6
NC_011094:973140:9731409731409746781539Salmonella enterica subsp. enterica serovar Schwarzengrund strglutathione-binding protein GsiB4e-1583.2
NC_010102:2178594:2196745219674521982831539Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-1583.2
NC_007948:4620661:4636214463621446377791566Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 57e-1582.4
NC_011083:967260:9672609672609687981539Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,glutathione-binding protein GsiB6e-1582.4
NC_011080:924326:9243269243269258641539Salmonella enterica subsp. enterica serovar Newport str. SL254,glutathione-binding protein GsiB6e-1582.4
NC_011205:944125:9441259441259456631539Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853glutathione-binding protein GsiB6e-1582.4
NC_011294:878896:8788968788968804341539Salmonella enterica subsp. enterica serovar Enteritidis strABC transporter substrate-binding protein9e-1582
NC_015573:110108:1271331271331287431611Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomenickel ABC transporter, periplasmic nickel-binding protein1e-1481.6
NC_014550:3534000:3553854355385435553711518Arthrobacter arilaitensis Re117, complete genomeABC transporter substrate-binding protein2e-1480.9
NC_014622:5553628:5558079555807955595481470Paenibacillus polymyxa SC2 chromosome, complete genomenickel transporter (nickel-binding protein)2e-1480.5
NC_016906:1565868:1586442158644215880491608Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative peptide-binding periplasmic protein3e-1480.5
NC_018644:137755:1559891559891575571569Alpha proteobacterium HIMB59 chromosome, complete genomefamily 5 extracellular solute-binding protein3e-1480.1
NC_015578:3371171:3392086339208633936391554Treponema primitia ZAS-2 chromosome, complete genomeputative bacterial extracellular solute-binding protein, family 53e-1480.1
NC_018515:570366:5751405751405767531614Desulfosporosinus meridiei DSM 13257 chromosome, complete genomenickel ABC transporter, nickel/metallophore periplasmic binding protein5e-1479.7
NC_010814:2217153:2235180223518022368201641Geobacter lovleyi SZ, complete genome4-phytase1e-1378.2
NC_015379:3570658:3589997358999735915951599Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative dipeptide ABC transporter periplasmic component1e-1378.2
NC_010510:310938:3313163313163328901575Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completenickel ABC transporter, periplasmic nickel-binding protein2e-1377.4
NC_015573:110108:1295791295791311741596Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomenickel ABC transporter, periplasmic nickel-binding protein6e-1376.3
NC_014328:2467239:2485154248515424867401587Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative peptide ABC transporter periplasmic protein1e-1274.7
NC_012917:1740542:1740542174054217420861545Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeextracellular solute-binding protein family 52e-1274.3
NC_009952:2752500:2759653275965327611761524Dinoroseobacter shibae DFL 12, complete genomeputative extracellular solute-binding protein2e-1274.3
NC_009832:1664238:1690775169077516923131539Serratia proteamaculans 568, complete genomeextracellular solute-binding protein family 55e-1272.8
NC_012214:2019000:2032401203240120339991599Erwinia pyrifoliae Ep1/96, complete genomePeriplasmic dipeptide transport protein9e-1272
NC_014364:2751662:2752716275271627542841569Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 51e-1172
NC_014831:329983:3413673413673430881722Thermaerobacter marianensis DSM 12885 chromosome, complete genomeextracellular solute-binding protein family 51e-1172
NC_020211:1655826:1676197167619716777321536Serratia marcescens WW4, complete genomeglutathione periplasmic binding protein, ABC superfamily transporter1e-1171.6
NC_017343:224777:2431402431402446151476Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeextracellular solute-binding proteins, family 5 Middle family protein2e-1171.2
NC_014614:2359046:2362030236203023637481719Clostridium sticklandii, complete genomeoligopeptide ABC transporter, oligopeptide-binding protein2e-1171.2
NC_005773:2641715:2659142265914226607731632Pseudomonas syringae pv. phaseolicola 1448A, complete genomenickel ABC transporter, periplasmic nickel-binding protein, putative2e-1171.2
NC_015556:4118304:4139877413987741414901614Pseudomonas fulva 12-X chromosome, complete genomeextracellular solute-binding protein family 52e-1170.9
NC_014624:1675500:1699381169938117009641584Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein7e-1168.9
NC_015224:4386599:4386599438659943882061608Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,periplasmic dipeptide transport protein8e-1168.9
NC_002678:6061448:6074819607481960761321314Mesorhizobium loti MAFF303099, complete genomeABC transporter binding protein1e-1068.6
NC_003454:128000:1461311461311476301500Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeOligopeptide-binding protein oppA1e-1068.6
NC_020064:79422:1121231121231137301608Serratia marcescens FGI94, complete genomeABC-type dipeptide transport system, periplasmic component1e-1068.2
NC_017273:352150:3590993590993606911593Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completeABC transporter periplasmic protein2e-1067.8
NC_014640:4031336:4032415403241540339861572Achromobacter xylosoxidans A8 chromosome, complete genomeextracellular solute-binding protein, family 5 middle family protein 202e-1067.8
NC_011601:3951324:3954557395455739561641608Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomedipeptide transporter2e-1067.4
NC_014625:1903277:1904288190428819058831596Ketogulonicigenium vulgare Y25 chromosome, complete genomeextracellular solute-binding protein3e-1067
NC_017059:3355006:3360832336083233624451614Rhodospirillum photometricum DSM 122, complete genomeExtracellular solute-binding protein, family 53e-1067
NC_015499:1466794:1466794146679414683711578Thermodesulfobium narugense DSM 14796 chromosome, complete genomeABC-type transporter, periplasmic subunit3e-1067
NC_004337:3590323:3677161367716136787681608Shigella flexneri 2a str. 301, complete genomedipeptide transport protein7e-1065.9
NC_014761:516981:5169815169815185611581Oceanithermus profundus DSM 14977 chromosome, complete genomeextracellular solute-binding protein family 59e-1065.5
NC_015968:204969:2192822192822208891608Enterobacter asburiae LF7a chromosome, complete genomeABC transporter periplasmic subunit1e-0965.5
NC_012522:7763426:7785227778522777868011575Rhodococcus opacus B4, complete genomeputative ABC transporter substrate-binding protein2e-0963.9
NC_009436:203365:2132362132362148431608Enterobacter sp. 638, complete genomeextracellular solute-binding protein3e-0963.9
NC_013159:2098500:2123325212332521250941770Saccharomonospora viridis DSM 43017, complete genomeABC-type dipeptide transport system, periplasmic component6e-0962.8
NC_012881:3520956:3534493353449335360641572Desulfovibrio salexigens DSM 2638, complete genomeextracellular solute-binding protein family 51e-0862
NC_012032:1878854:1878854187885418804731620Chloroflexus sp. Y-400-fl, complete genome4-phytase1e-0862
NC_010465:62348:1021021021021037091608Yersinia pseudotuberculosis YPIII, complete genome4-phytase2e-0861.2
NC_016641:2950000:2970780297078029724351656Paenibacillus terrae HPL-003 chromosome, complete genomeheme-binding protein A4e-0860.1
NC_002505:168532:1702671702671718951629Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completepeptide ABC transporter, periplasmic peptide-binding protein1e-0758.2
NC_012668:442601:4670914670914686471557Vibrio cholerae MJ-1236 chromosome 1, complete sequencepeptide ABC transporter substrate-binding protein1e-0758.2
NC_016445:2593800:2595607259560725971631557Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completepeptide/nickel transport system substrate-binding protein1e-0758.2
NC_016944:168530:1703371703371718931557Vibrio cholerae IEC224 chromosome I, complete sequencepeptide ABC transporter substrate-binding protein1e-0758.2
NC_013961:3709800:3711024371102437126341611Erwinia amylovora, complete genomeputative ABC transport system, periplasmic component2e-0757.8
NC_010681:74587:7532775327768921566Burkholderia phytofirmans PsJN chromosome 1, complete sequenceextracellular solute-binding protein family 52e-0757.8
NC_012988:4292815:4328512432851243300681557Methylobacterium extorquens DM4, complete genomeABC transporter substrate-binding protein2e-0757.4
NC_015424:2917817:2931657293165729332941638Aeromonas veronii B565 chromosome, complete genomeoligopeptide ABC transporter periplasmic binding protein3e-0757
NC_008740:443274:5123035123035138651563Marinobacter aquaeolei VT8, complete genomeextracellular solute-binding protein, family 55e-0756.2
NC_016745:1257397:1257397125739712589531557Oceanimonas sp. GK1 chromosome, complete genomedipeptide-binding protein8e-0755.8
NC_011206:2549132:2574719257471925762211503Acidithiobacillus ferrooxidans ATCC 53993, complete genomeextracellular solute-binding protein family 58e-0755.8
NC_012214:3931824:3931824393182439334341611Erwinia pyrifoliae Ep1/96, complete genomedipeptide transport system, periplasmic protein8e-0755.8
NC_011761:2641481:2674880267488026765111632Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completepeptide ABC transporter substrate-binding protein9e-0755.5
NC_012779:261438:2820552820552836741620Edwardsiella ictaluri 93-146, complete genomeperiplasmic oligopeptide-binding protein9e-0755.5
NC_005773:5684000:5699457569945757010941638Pseudomonas syringae pv. phaseolicola 1448A, complete genomepeptide ABC transporter, periplasmic peptide-binding protein1e-0655.5
NC_013192:2434664:2439022243902224406021581Leptotrichia buccalis DSM 1135, complete genomeextracellular solute-binding protein family 51e-0655.1
NC_009937:3324793:3325461332546133270531593Azorhizobium caulinodans ORS 571, complete genomeABC-type dipeptide transport periplasmic component5e-0653.1