Pre_GI Gene

Some Help

Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:946418 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9464189479561539putative ABC transporter periplasmic binding proteinQuickGO ontologyBLASTP
948083948937855putative ABC transporter periplasmic binding proteinQuickGO ontologyBLASTP
948940949851912putative ABC transporter inner membrane componentQuickGO ontologyBLASTP
9499429512671326putative Fe-S oxidoreductase family 1QuickGO ontologyBLASTP
953021953875855putative electron transfer flavoprotein beta subunitQuickGO ontologyBLASTP
953886954833948putative electron transfer flavoprotein alpha subunitQuickGO ontologyBLASTP
954866955078213hypothetical proteinBLASTP
9551289562911164putative acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
9567409584251686putative dehydrogenase flavoproteinsQuickGO ontologyBLASTP
9586169598241209transposase of Tn10QuickGO ontologyBLASTP
959928960575648putative transcriptional regulator LysR familyQuickGO ontologyBLASTP
961697962377681putative dehydrogenaseQuickGO ontologyBLASTP
962374963000627putative glutathione S-transferaseQuickGO ontologyBLASTP
9632449644461203D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 6aQuickGO ontologyBLASTP
964491965249759transcriptional repressor for deoxyribose operon DeoR familyQuickGO ontologyBLASTP
965321965995675putative permeaseQuickGO ontologyBLASTP
9662429674741233multidrug translocaseQuickGO ontologyBLASTP
967528968343816putative hydrolaseQuickGO ontologyBLASTP
9683409695511212putative transport proteinputative regulatornQuickGO ontologyBLASTP
969719970339621paral putative regulator TetRAcr familyQuickGO ontologyBLASTP
9704569721411686hypothetical proteinBLASTP