Pre_GI: BLASTP Hits

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Query: NC_012917:3378759:3393164 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3393164, End: 3394123, Length: 960

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2940539:295913329591332960089957Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative AEC family malate permease3e-104378
NC_010465:1427170:142902614290261429982957Yersinia pseudotuberculosis YPIII, complete genomeAuxin Efflux Carrier3e-104378
NC_008149:1440371:144037114403711441327957Yersinia pestis Nepal516, complete genomemembrane protein3e-104378
NC_008150:2574794:259220925922092593165957Yersinia pestis Antiqua, complete genomehypothetical protein3e-104378
NC_005810:3021913:303961730396173040573957Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-104378
NC_003143:3191246:320863632086363209592957Yersinia pestis CO92, complete genomehypothetical protein3e-104378
NC_004088:1510467:151046715104671511423957Yersinia pestis KIM, complete genomehypothetical protein3e-104378
NC_009381:2491427:250885525088552509811957Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-104378
NC_014029:3171627:317162731716273172583957Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-104378
NC_017154:2876545:289384828938482894804957Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-104378
NC_017160:3094768:309660230966023097558957Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-104378
NC_017168:2535732:255309825530982554054957Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-104378
NC_010159:409500:427333427333428289957Yersinia pestis Angola, complete genometransporter, auxin efflux carrier family1e-103376
NC_010634:3250810:326768532676853268641957Yersinia pseudotuberculosis PB1/+, complete genomeauxin efflux carrier2e-103375
NC_006155:3333303:335022533502253351181957Yersinia pseudotuberculosis IP 32953, complete genomepossible AEC family malate permease2e-103375
NC_009708:1403434:140343414034341404390957Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeauxin efflux carrier family protein4e-103374
NC_015460:418826:438472438472439428957Gallibacterium anatis UMN179 chromosome, complete genomeputative transporter YfdV2e-63242
NC_004129:1014986:103309110330911034032942Pseudomonas fluorescens Pf-5, complete genomehypothetical protein1e-43177
NC_007963:2777066:277822227782222779169948Chromohalobacter salexigens DSM 3043, complete genomeAuxin Efflux Carrier2e-42173
NC_018868:3036205:306405430640543065019966Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein4e-35149
NC_015977:935798:961728961728962681954Roseburia hominis A2-183 chromosome, complete genomehypothetical protein7e-29127
NC_014363:1344768:136534813653481366313966Olsenella uli DSM 7084 chromosome, complete genomeAuxin Efflux Carrier7e-23108
NC_011894:6888562:691998369199836920912930Methylobacterium nodulans ORS 2060, complete genomeAuxin Efflux Carrier8e-1994.7
NC_016077:998741:105360010536001054541942Acidaminococcus intestini RyC-MR95 chromosome, complete genomemalonate transporter1e-1894
NC_012918:356019:358878358878359795918Geobacter sp. M21 chromosome, complete genomehypothetical protein1e-1480.5
NC_009654:3980289:398716639871663988113948Marinomonas sp. MWYL1, complete genomeauxin efflux carrier5e-1168.9
NC_016818:2836851:287455528745552875472918Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative permease5e-1065.5
NC_012778:1778654:178487717848771785833957Eubacterium eligens ATCC 27750, complete genomehypothetical protein2e-0860.1
NC_015224:279037:298431298431299390960Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein6e-0755.5
NC_015563:3203012:322739932273993228352954Delftia sp. Cs1-4 chromosome, complete genomeauxin efflux carrier2e-0653.1