Pre_GI: BLASTP Hits

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Query: NC_012917:1506083:1528091 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1528091, End: 1529371, Length: 1281

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015676:1736375:1764393176439317656401248Methanosalsum zhilinae DSM 4017 chromosome, complete genomegroup 1 glycosyl transferase5e-33142
NC_016112:57641:7186071860730981239Methylomicrobium alcaliphilum chromosome, complete genomegroup 1 glycosyl transferase2e-32140
NC_014484:1690272:1716414171641417176671254Spirochaeta thermophila DSM 6192 chromosome, complete genomeglycosyl transferase, group 14e-31135
NC_009482:87193:98871988711001901320Synechococcus sp. RCC307 chromosome, complete genomeglysosyltransferase5e-28125
NC_011884:2051723:2079030207903020802831254Cyanothece sp. PCC 7425, complete genomeglycosyl transferase group 11e-26121
NC_014002:80967:9352993529947521224Methanohalophilus mahii DSM 5219 chromosome, complete genomeglycosyl transferase group 18e-26118
NC_009615:3308538:3316942331694233182131272Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein1e-1997.8
NC_015164:2716980:2727662272766227289241263Bacteroides salanitronis DSM 18170 chromosome, complete genomeglycosyl transferase group 15e-1995.9
NC_016629:1111619:1143147114314711452612115Desulfovibrio africanus str. Walvis Bay chromosome, completegroup 1 glycosyl transferase2e-1790.5
NC_016616:1861852:1878604187860418874148811Dechlorosoma suillum PS chromosome, complete genomeglycosyltransferase2e-1790.5
NC_011296:463359:4697794697794710381260Thermodesulfovibrio yellowstonii DSM 11347, complete genomeglycosyl transferase, group 1/2 family protein3e-1790.1
NC_012108:3391190:3392092339209233933481257Desulfobacterium autotrophicum HRM2, complete genomeGlgA39e-1788.6
NC_002939:3303989:3320350332035033275557206Geobacter sulfurreducens PCA, complete genomeglycosyl transferase, group 1/2 family protein1e-1481.3
NC_015914:917124:9158479158479171361290Cyclobacterium marinum DSM 745 chromosome, complete genomegroup 1 glycosyl transferase2e-1377.8
NC_014974:246404:2570712570712582311161Thermus scotoductus SA-01 chromosome, complete genomeglycosyltransferase3e-1377
NC_011884:1591430:1591430159143015927911362Cyanothece sp. PCC 7425, complete genomeglycosyl transferase group 13e-1376.6
NC_014248:4642149:4643823464382346450941272Nostoc azollae 0708 chromosome, complete genomegroup 1 glycosyl transferase6e-1375.9
NC_015680:755500:7743017743017754461146Pyrococcus yayanosii CH1 chromosome, complete genomeglycosyltransferase9e-1375.1
NC_011884:2051723:2064682206468220659441263Cyanothece sp. PCC 7425, complete genomeglycosyl transferase group 12e-1274.3
NC_011026:3009500:3018812301881230200741263Chloroherpeton thalassium ATCC 35110, complete genomeglycosyl transferase group 13e-1273.6
NC_005863:80843:9640096400977371338Desulfovibrio vulgaris subsp. vulgaris str. Hildenboroughglycosyl transferase, group 1 family protein5e-1272.8
NC_008741:81914:1061051061051074421338Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,glycosyl transferase, group 16e-1272.4
NC_007759:2315490:2328037232803723292841248Syntrophus aciditrophicus SB, complete genomeglycosyltransferase8e-1272
NC_010475:420978:4294304294304306741245Synechococcus sp. PCC 7002, complete genomeglycosyl transferase, group 1 family2e-1170.5
NC_015573:1729057:1750765175076517519011137Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomegroup 1 glycosyl transferase4e-1169.7
NC_005125:4524868:4524868452486845266311764Gloeobacter violaceus PCC 7421, complete genomeprobable glucosyltransferase1e-1068.2
NC_014221:687537:6943356943356955401206Truepera radiovictrix DSM 17093 chromosome, complete genomeglycogen synthase1e-1068.2
NC_015174:5157355:5158730515873051599831254Planctomyces brasiliensis DSM 5305 chromosome, complete genomeglycosyl transferase group 14e-1066.6
NC_007510:913411:9134119134119145471137Burkholderia sp. 383 chromosome 1, complete sequenceGlycosyl transferase, group 13e-1066.6
NC_020272:599064:6219096219096230481140Bacillus amyloliquefaciens IT-45, complete genomegroup 1 glycosyl transferase4e-1066.2
NC_010508:933862:9591239591239602591137Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceglycosyl transferase group 15e-1066.2
NC_009615:3490206:3502149350214935033961248Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein7e-1065.5
NC_012804:816961:8368448368448383551512Thermococcus gammatolerans EJ3, complete genomeGlycosyltransferase, family 18e-1065.1
NC_005863:80843:9411594115962712157Desulfovibrio vulgaris subsp. vulgaris str. Hildenboroughglycosyl transferase, group 1/2 family protein1e-0964.7
NC_008741:81914:1075711075711097272157Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,glycosyl transferase, family 21e-0964.7
NC_013223:2279869:2282805228280522852672463Desulfohalobium retbaense DSM 5692, complete genomeglycosyl transferase group 12e-0963.9
NC_009454:2663539:2676100267610026778781779Pelotomaculum thermopropionicum SI, complete genomeglycosyltransferase3e-0963.5
NC_004369:437594:4566284566284579021275Corynebacterium efficiens YS-314, complete genomehypothetical protein4e-0963.2
NC_019978:2396000:2402547240254724036861140Halobacteroides halobius DSM 5150, complete genomeglycosyltransferase5e-0962.8
NC_013716:4408201:4421592442159244227401149Citrobacter rodentium ICC168, complete genomelipopolysaccharide 1,2-N-acetylglucosaminetransferase5e-0962.4
NC_019978:2396000:2404526240452624056351110Halobacteroides halobius DSM 5150, complete genomeglycosyltransferase6e-0962.4
NC_016112:3103716:3127753312775331289101158Methylomicrobium alcaliphilum chromosome, complete genomesugar transferase8e-0962
NC_015315:1:1513215132163401209Thermoproteus uzoniensis 768-20 chromosome, complete genomefamily 1 glycosyl transferase1e-0861.6
NC_006396:878453:8964958964958975561062Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceLPS glycosyltransferase1e-0861.2
NC_018870:271323:2841592841592853011143Thermacetogenium phaeum DSM 12270 chromosome, complete genomeglycosyl transferase2e-0860.8
NC_009348:1475955:1519858151985815209521095Aeromonas salmonicida subsp. salmonicida A449, complete genomeglycosyltransferase2e-0860.8
NC_007298:2568851:2595872259587225970351164Dechloromonas aromatica RCB, complete genomeGlycosyl transferase, group 12e-0860.8
NC_009376:296500:3071173071173082441128Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomegroup 1 glycosyl transferase2e-0860.8
NC_016514:3048883:3060908306090830619811074Enterobacter cloacae EcWSU1 chromosome, complete genomeGDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase2e-0860.8
NC_016148:1877711:1886949188694918880251077Thermovirga lienii DSM 17291 chromosome, complete genomegroup 1 glycosyl transferase2e-0860.5
NC_016613:221476:2619142619142630171104Vibrio sp. EJY3 chromosome 1, complete sequenceglycosyltransferase2e-0860.5
NC_014729:1627620:1646845164684516480771233Halogeometricum borinquense DSM 11551 chromosome, complete genomeglycosyltransferase3e-0860.5
CU928145:4167043:4176208417620841773501143Escherichia coli 55989 chromosome, complete genomeLipopolysaccharide 1, 2-N-acetylglucosaminetransferase3e-0860.1
NC_011748:4167043:4176208417620841773501143Escherichia coli 55989, complete genomeLipopolysaccharide 1, 2-N-acetylglucosaminetransferase3e-0860.1
NC_011415:4040211:4049376404937640505181143Escherichia coli SE11 chromosome, complete genomelipopolysaccharide 1,2-N-acetylglucosaminetransferase3e-0860.1
NC_013361:4991020:5001251500125150023931143Escherichia coli O26:H11 str. 11368 chromosome, complete genomelipopolysaccharide 1,2-N- acetylglucosamine transferase WaaD3e-0860.1
NC_013364:4460500:4468587446858744697291143Escherichia coli O111:H- str. 11128, complete genomelipopolysaccharide 1,2-N- acetylglucosamine transferase WaaD3e-0860.1
AP010958:4668181:4678412467841246795541143Escherichia coli O103:H2 str. 12009 DNA, complete genomelipopolysaccharide 1,2-N- acetylglucosamine transferase WaaD3e-0860.1
NC_013353:4668181:4678412467841246795541143Escherichia coli O103:H2 str. 12009, complete genomelipopolysaccharide 1,2-N- acetylglucosamine transferase WaaD3e-0860.1
NC_015216:1278706:1317809131780913189271119Methanobacterium sp. AL-21 chromosome, complete genomegroup 1 glycosyl transferase3e-0860.1
NC_012984:1074721:1079679107967910808721194Lactobacillus plantarum JDM1, complete genomeputative glycosyltransferase4e-0859.7
NC_000853:648075:6561406561406573061167Thermotoga maritima MSB8, complete genomelipopolysaccharide biosynthesis protein, putative6e-0859.3
NC_014253:1197005:1237296123729612384801185Methanohalobium evestigatum Z-7303 chromosome, complete genomeglycosyl transferase group 16e-0859.3
NC_003901:1346281:1346281134628113474861206Methanosarcina mazei Go1, complete genomeglycosyltransferase6e-0859.3
NC_014539:888562:9109609109609121081149Burkholderia sp. CCGE1003 chromosome 1, complete sequencegroup 1 glycosyl transferase5e-0859.3
NC_010804:782222:8083968083968095321137Burkholderia multivorans ATCC 17616 chromosome 1, completeputative glycosyltransferase5e-0859.3
NC_009483:2640403:2700742270074227018721131Geobacter uraniireducens Rf4 chromosome, complete genomegroup 1 glycosyl transferase5e-0859.3
NC_020064:1547524:1579570157957015806521083Serratia marcescens FGI94, complete genomeglycosyltransferase7e-0858.9
NC_013156:127000:1453191453191463681050Methanocaldococcus fervens AG86, complete genomeglycosyl transferase group 17e-0858.9
NC_009675:5187452:5193839519383951949721134Anaeromyxobacter sp. Fw109-5 chromosome, complete genomegroup 1 glycosyl transferase6e-0858.9
NC_011751:4251296:4260464426046442616061143Escherichia coli UMN026 chromosome, complete genomeLipopolysaccharide 1, 2-N-acetylglucosaminetransferase6e-0858.9
NC_004757:2451919:2456125245612524572671143Nitrosomonas europaea ATCC 19718, complete genomeGlycosyl transferase group 11e-0758.5
NC_014655:2705482:2712806271280627140201215Leadbetterella byssophila DSM 17132 chromosome, complete genomeglycosyl transferase group 11e-0758.5
NC_002655:4606000:4614028461402846151701143Escherichia coli O157:H7 EDL933, complete genomeputative LPS biosynthesis enzyme1e-0758.5
NC_002695:4537000:4545045454504545461871143Escherichia coli O157:H7 str. Sakai, complete genomelipopolysaccharide 1,2-N- acetylglucosaminetransferase1e-0758.5
NC_011353:4639002:4648149464814946492911143Escherichia coli O157:H7 str. EC4115 chromosome, complete genomelipopolysaccharide 1,2-N-acetylglucosaminetransferase1e-0758.5
NC_013008:4595043:4604190460419046053321143Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeUDP-glucose:(glucosyl) LPS alpha-1,2-glucosyltransferase1e-0758.5
NC_013941:4427000:4434990443499044361321143Escherichia coli O55:H7 str. CB9615 chromosome, complete genomelipopolysaccharide 1,2-N-acetylglucosaminetransferase1e-0758.5
NC_008258:3995553:4006521400652140076631143Shigella flexneri 5 str. 8401, complete genomelipopolysaccharide 1,2-N- acetylglucosaminetransferase9e-0858.5
NC_008698:1612873:1656100165610016573801281Thermofilum pendens Hrk 5, complete genomeglycosyl transferase, group 11e-0758.2
NC_004337:3761865:3770684377068437718261143Shigella flexneri 2a str. 301, complete genomelipopolysaccharide 1,2-N- acetylglucosaminetransferase1e-0758.2
NC_004337:3590323:3770684377068437718261143Shigella flexneri 2a str. 301, complete genomelipopolysaccharide 1,2-N- acetylglucosaminetransferase1e-0758.2
NC_004741:3992384:4003391400339140045331143Shigella flexneri 2a str. 2457T, complete genomelipopolysaccharide 1,2-N- acetylglucosaminetransferase1e-0758.2
NC_017328:3794105:3802924380292438040661143Shigella flexneri 2002017 chromosome, complete genomeLipopolysaccharide 1,2-N-acetylglucosaminetransferase1e-0758.2
NC_011745:4226186:4235350423535042364921143Escherichia coli ED1a chromosome, complete genomelipopolysaccharide 1, 2-N-acetylglucosaminetransferase1e-0758.2
NC_015976:3118804:3127416312741631326475232Sphingobium sp. SYK-6, complete genomehypothetical protein1e-0758.2
NC_014844:1818939:1842192184219218444742283Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomegroup 1 glycosyl transferase1e-0758.2
NC_013158:1085937:1095930109593010970901161Halorhabdus utahensis DSM 12940, complete genomeglycosyl transferase group 11e-0758.2
NC_012791:821371:8342308342308364762247Variovorax paradoxus S110 chromosome 1, complete genomeglycosyl transferase group 11e-0757.8
NC_011529:1685834:1700832170083217019231092Thermococcus onnurineus NA1, complete genomeglycosyltransferase1e-0757.8
NC_012483:1297799:1318609131860913201471539Acidobacterium capsulatum ATCC 51196, complete genomeglycosyl transferase, group 1 family1e-0757.8
NC_003078:671000:6865666865666878161251Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative membrane-anchored glycosyltransferase protein2e-0757.4
NC_020995:1205524:1216207121620712173041098Enterococcus casseliflavus EC20, complete genomehypothetical protein2e-0757.4
NC_019902:27574:3446034460356861227Thioalkalivibrio nitratireducens DSM 14787, complete genomeGlycosyltransferase2e-0757.4
NC_017323:599549:6278196278196290691251Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequencegroup 1 glycosyl transferase2e-0757
NC_014377:480158:4928064928064950552250Thermosediminibacter oceani DSM 16646 chromosome, complete genomeglycosyl transferase family 23e-0757
NC_013971:2297777:2305719230571923068461128Erwinia amylovora ATCC 49946 chromosome, complete genomegalactosyl transferase3e-0757
NC_013961:2260250:2268192226819222693191128Erwinia amylovora, complete genomeUncharacterized glycosyltransferase MJ16073e-0757
NC_008593:980731:1001330100133010024211092Clostridium novyi NT, complete genomeglycosyl transferase, group 1 family protein, putative3e-0757
NC_011740:4007000:4013713401371340148551143Escherichia fergusonii ATCC 35469, complete genomeLipopolysaccharide 1, 2-N-acetylglucosaminetransferase4e-0756.6
NC_019942:686564:7133087133087144171110Aciduliprofundum sp. MAR08-339, complete genomeglycosyltransferase5e-0756.2
NC_013508:1289159:1302350130235013034711122Edwardsiella tarda EIB202, complete genomeglycosyltransferase5e-0756.2
NC_015500:1923514:1948999194899919502221224Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyl transferase group 15e-0756.2
NC_010511:1590500:1599420159942016005351116Methylobacterium sp. 4-46 chromosome, complete genomegroup 1 glycosyl transferase4e-0756.2
NC_013642:400651:4214314214314225971167Thermotoga naphthophila RKU-10, complete genomeglycosyl transferase group 16e-0755.8
NC_016512:679688:6940396940396952231185Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeglycogen synthase6e-0755.8
NC_007759:2315490:232696223269622327960999Syntrophus aciditrophicus SB, complete genomelipopolysaccharide 1,2-N-acetylglucosaminetransferase7e-0755.8
NC_009615:1849237:1855606185560618566881083Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein8e-0755.5
NC_003155:4906639:4926336492633649277301395Streptomyces avermitilis MA-4680, complete genomeglycosyl transferase8e-0755.5
NC_012793:3096095:3134851313485131359601110Geobacillus sp. WCH70, complete genomeglycosyl transferase group 17e-0755.5
NC_013385:90331:9294392943940761134Ammonifex degensii KC4, complete genomeglycosyl transferase group 17e-0755.5
NC_012214:1588573:1617796161779616189231128Erwinia pyrifoliae Ep1/96, complete genomeGalactosyl transferase9e-0755.1
NC_009954:1520417:1533317153331715344711155Caldivirga maquilingensis IC-167, complete genomeglycosyl transferase group 19e-0755.1
NC_012779:1286500:1298103129810312992031101Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-0655.1
NC_010803:301753:3206983206983217921095Chlorobium limicola DSM 245, complete genomeglycosyl transferase group 11e-0654.7
NC_014638:1043854:1044475104447510457251251Bifidobacterium bifidum PRL2010 chromosome, complete genomeglycosyltransferase1e-0654.7
NC_014616:1065500:1066200106620010674501251Bifidobacterium bifidum S17 chromosome, complete genomeglycosyltransferase1e-0654.7
NC_004463:6924150:6944817694481769459771161Bradyrhizobium japonicum USDA 110, complete genomeprobable glycosyl transferase1e-0654.7
NC_010175:2062932:2073669207366920748261158Chloroflexus aurantiacus J-10-fl, complete genomeglycosyl transferase group 11e-0654.7
NC_012032:2059000:2069133206913320702901158Chloroflexus sp. Y-400-fl, complete genomeglycosyl transferase group 11e-0654.7
NC_018012:121793:1324871324871337431257Thiocystis violascens DSM 198 chromosome, complete genomeglycosyltransferase1e-0654.7
NC_011832:366092:3766003766003778081209Candidatus Methanosphaerula palustris E1-9c, complete genomeglycosyl transferase group 12e-0654.3
NC_014039:708427:7213607213607225441185Propionibacterium acnes SK137 chromosome, complete genomeglycogen synthase2e-0654.3
NC_016511:678582:6946546946546958381185Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeglycogen synthase2e-0654.3
NC_015966:2337833:2347146234714623483001155Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomegroup 1 glycosyl transferase2e-0654.3
NC_015948:1590297:1603018160301816042111194Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeglycosyltransferase2e-0654.3
NC_013501:931418:9402529402529414061155Rhodothermus marinus DSM 4252, complete genomeglycosyl transferase group 12e-0654.3
NC_011593:1622260:1639533163953316407831251Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,glycogen synthase2e-0653.9
NC_017219:1622050:1639323163932316405731251Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative glycosyltransferase2e-0653.9
NC_017272:921193:9306709306709318781209Thermus thermophilus SG0.5JP17-16 chromosome, complete genomegroup 1 glycosyl transferase2e-0653.9
NC_012914:6583000:6594352659435265954701119Paenibacillus sp. JDR-2, complete genomeglycosyl transferase group 12e-0653.9
NC_017221:1222963:1246593124659312478431251Bifidobacterium longum subsp. longum KACC 91563 chromosome,glycosyltransferase2e-0653.9
NC_018645:2690325:2700796270079627019471152Desulfobacula toluolica Tol2, complete genomeglycosyl transferase, family I3e-0653.5
NC_017218:1042298:1058284105828410595341251Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomestarch synthase3e-0653.5
NC_004307:579729:6019336019336031831251Bifidobacterium longum NCC2705, complete genomepossible glycosyltransferase3e-0653.5
NC_015052:1094825:1097421109742110986711251Bifidobacterium longum subsp. infantis 157F, complete genomeglycosyltransferase3e-0653.5
NC_014169:1099024:1103419110341911046691251Bifidobacterium longum subsp. longum JDM301 chromosome, completeglycogen synthase3e-0653.5
NC_010816:621849:6412026412026424521251Bifidobacterium longum DJO10A, complete genomeGlycosyltransferase3e-0653.5
NC_007512:865500:8879318879318890461116Pelodictyon luteolum DSM 273, complete genomeGlycosyltransferase-like4e-0652.8
NC_011529:1722829:1735946173594617371211176Thermococcus onnurineus NA1, complete genomeglycosyltransferase5e-0652.8
NC_014206:3468500:3475811347581134769711161Geobacillus sp. C56-T3 chromosome, complete genomeglycosyl transferase family protein6e-0652.4
NC_011601:4036590:4044564404456440457061143Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomelipopolysaccharide 1,2-N-acetylglucosamine transferase7e-0652.4
NC_009051:165102:1850281850281861371110Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, group 19e-0652