Pre_GI Gene

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Host: NC_014169 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014169:1099024 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
109902411006641641family 5 extracellular solute-binding proteinQuickGO ontologyBLASTP
110082311027181896hypothetical proteinBLASTP
11028261103290465hypothetical proteinBLASTP
110341911046691251glycogen synthaseQuickGO ontologyBLASTP
11048201105668849molybdenum ABC transporter ATPaseQuickGO ontologyBLASTP
11057661106611846Cof-like hydrolaseQuickGO ontologyBLASTP
110773411089001167major facilitator superfamily proteinQuickGO ontologyBLASTP
110919411103811188major facilitator superfamily proteinQuickGO ontology
111118811133832196DNA replication proteinQuickGO ontologyBLASTP
111196411134421479transposaseQuickGO ontologyBLASTP
111363211148221191putative transposaseQuickGO ontologyBLASTP
11148151115597783IstB domain-containing protein ATP-binding proteinQuickGO ontologyBLASTP
11156651116090426transposaseQuickGO ontologyBLASTP
11174571118233777hypothetical proteinBLASTP
111844511196291185mutator type transposaseQuickGO ontologyBLASTP
111980311222832481hypothetical proteinBLASTP
112230711255313225type III restriction enzymeQuickGO ontologyBLASTP
112554211274761935adenine specific DNA methylase ModQuickGO ontologyBLASTP
11274731128189717hypothetical proteinBLASTP
112818611314733288helicase domain-containing proteinQuickGO ontologyBLASTP
113315611356332478hypothetical proteinBLASTP
11356991135896198phage proteinQuickGO ontologyBLASTP
11361601136717558RarD proteinQuickGO ontologyBLASTP