Pre_GI: BLASTP Hits

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Query: NC_012660:4558122:4576415 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 4576415, End: 4576948, Length: 534

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:4432983:444604244460424446575534Pseudomonas syringae pv. tomato str. DC3000, complete genomelysozyme, putative2e-74277
NC_004578:3817330:383103838310383831583546Pseudomonas syringae pv. tomato str. DC3000, complete genomelysozyme, putative8e-59226
NC_005773:2177184:218310721831072183652546Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative chitinase2e-58224
NC_004129:2234851:224007122400712240622552Pseudomonas fluorescens Pf-5, complete genomepyocin R2_PP, lytic enzyme2e-54211
NC_005773:2177184:219379921937992194344546Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative chitinase3e-53207
NC_015733:1976752:198241519824151982966552Pseudomonas putida S16 chromosome, complete genomepyocin R2_PP, lytic enzyme1e-48192
NC_017986:4124335:412990241299024130471570Pseudomonas putida ND6 chromosome, complete genomeglycoside hydrolase family protein2e-48191
NC_010002:3785313:378740737874073787958552Delftia acidovorans SPH-1, complete genomeputative lysozyme5e-45180
NC_016830:4999946:501578150157815016344564Pseudomonas fluorescens F113 chromosome, complete genomepyocin lytic enzyme8e-44176
NC_016002:2037374:205644220564422056984543Pseudogulbenkiania sp. NH8B, complete genomeglycoside hydrolase family protein7e-42169
NC_009255:1369200:138805713880571388635579Burkholderia vietnamiensis G4 chromosome 2, complete sequenceglycoside hydrolase family protein3e-36151
NC_013282:1200993:122515912251591225785627Cronobacter turicensis, complete genomeUncharacterized protein HI14152e-30131
NC_017047:1906000:191830019183001918926627Rahnella aquatilis HX2 chromosome, complete genomeputative endolysin4e-30130
NC_012912:325913:332536332536333162627Dickeya zeae Ech1591, complete genomeglycoside hydrolase family 193e-29127
NC_013592:4295449:431316143131614313787627Dickeya dadantii Ech586, complete genomeglycoside hydrolase family 195e-28123
NC_016641:1148220:1156074115607411570781005Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein4e-27120
NC_011770:1431740:145211114521111452728618Pseudomonas aeruginosa LESB58, complete genomeCOG3179: Predicted chitinase6e-27120
NC_015663:4522109:452715045271504527779630Enterobacter aerogenes KCTC 2190 chromosome, complete genomelytic enzyme3e-26117
NC_014121:1682638:169633316963331696881549Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelytic enzyme3e-26117
NC_011094:638552:664550664550665164615Salmonella enterica subsp. enterica serovar Schwarzengrund strlytic enzyme5e-25113
NC_017325:1897500:189797818979781898946969Sinorhizobium meliloti SM11 chromosome, complete genomechitinase-like protein2e-24112
NC_013282:1804909:182501118250111825565555Cronobacter turicensis, complete genomehypothetical protein2e-24112
NC_016612:3314846:333598533359853336533549Klebsiella oxytoca KCTC 1686 chromosome, complete genomelytic enzyme1e-24112
NC_016047:345491:355177355177355635459Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeendopeptidase LytF1e-24112
NC_014973:5099543:5124478512447851254881011Geobacter sp. M18 chromosome, complete genomeglycoside hydrolase family 191e-24112
NC_014168:1724993:1731346173134617328481503Segniliparus rotundus DSM 44985 chromosome, complete genomefamily 19 glycoside hydrolase1e-24112
NC_017325:1488841:148964314896431490611969Sinorhizobium meliloti SM11 chromosome, complete genomechitinase-like protein2e-24111
NC_015761:1017301:102522610252261025840615Salmonella bongori NCTC 12419, complete genomebacteriophage protein4e-24110
NC_020181:5217000:522775752277575228383627Enterobacter aerogenes EA1509E, complete genomehypothetical protein9e-24109
NC_011770:860944:881683881683882300618Pseudomonas aeruginosa LESB58, complete genomePredicted chitinase; lytic protein2e-23108
NC_009648:1541699:156536715653671565993627Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative glycoside hydrolase3e-23107
NC_013850:2182337:220954522095452210171627Klebsiella variicola At-22 chromosome, complete genomeglycoside hydrolase family 193e-23107
NC_020301:853267:865370865370865978609Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomehypothetical protein4e-23107
NC_010397:1802724:1809368180936818107411374Mycobacterium abscessus chromosome Chromosome, complete sequenceBacteriophage protein5e-23107
NC_010161:1501758:151116715111671511748582Bartonella tribocorum CIP 105476, complete genomehypothetical protein1e-22106
NC_010161:1324381:133379013337901334371582Bartonella tribocorum CIP 105476, complete genomepeptidoglycan binding protein1e-22106
NC_012731:2083650:211163421116342112260627Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative glycoside hydrolase2e-22105
NC_018607:2010500:201515420151542015747594Brachyspira pilosicoli B2904 chromosome, complete genomeglycoside hydrolase2e-22105
NC_010067:2304313:232964023296402329939300Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-22105
NC_010161:1949637:195948819594881960069582Bartonella tribocorum CIP 105476, complete genomehypothetical protein3e-22104
NC_010161:2548254:255766425576642558245582Bartonella tribocorum CIP 105476, complete genomehypothetical protein3e-22104
NC_011601:2806392:281283928128392813465627Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendolysin3e-22104
NC_020181:5384015:539721353972135397842630Enterobacter aerogenes EA1509E, complete genomePhage endolysin5e-22103
NC_014150:2560475:256367625636762564269594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 194e-21100
NC_019908:807000:812628812628813203576Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglycoside hydrolase family protein1e-2099
NC_014150:1607873:162002416200241620638615Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 192e-2098.2
NC_003902:3514000:353599035359903536631642Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related lytic enzyme8e-2096.7
NC_018604:305957:314155314155314781627Brachyspira pilosicoli WesB complete genomeglycoside hydrolase family 199e-2096.3
NC_014150:1936154:193923519392351939828594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 192e-1995.5
NC_014150:1497381:150134615013461501939594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 192e-1995.5
NC_017025:1761918:176969117696911770404714Flavobacterium indicum GPTSA100-9, complete genomeGlycoside hydrolase family 19, putative chitinase1e-1892.8
NC_017243:58000:613536135361964612Brachyspira intermedia PWS/A chromosome, complete genomeglycoside hydrolase2e-1891.7
NC_012214:1974500:198840819884081989031624Erwinia pyrifoliae Ep1/96, complete genomeLytic enzyme2e-1891.7
NC_020054:4983691:498793949879394988610672Fibrella aestuarina BUZ 2 drat genomeputative chitinase1e-1685.9
NC_005085:24623:3211132111342522142Chromobacterium violaceum ATCC 12472, complete genomeprobable hydroxyethylthiazole kinase4e-1684
NC_015947:2752450:2755845275584527568521008Burkholderia sp. JV3 chromosome, complete genomeglycoside hydrolase family protein8e-1683.2
NC_011071:2733438:2736843273684327378501008Stenotrophomonas maltophilia R551-3, complete genomechitinase-like protein1e-1582.8
NC_018748:1443176:1454863145486314560471185Emticicia oligotrophica DSM 17448 chromosome, complete genomehypothetical protein2e-1582
NC_018604:2871328:288056228805622881140579Brachyspira pilosicoli WesB complete genomeendolysin glycoside hydrolase2e-1581.6
NC_017243:1734179:174576917457691746251483Brachyspira intermedia PWS/A chromosome, complete genomeendolysin glycoside hydrolase2e-1581.6
NC_019908:1886647:189339118933911893969579Brachyspira pilosicoli P43/6/78 chromosome, complete genomeendolysin glycoside hydrolase3e-1581.3
NC_018607:2747462:275671727567172757295579Brachyspira pilosicoli B2904 chromosome, complete genomeendolysin glycoside hydrolase1e-1479.7
NC_009937:958576:961972961972962877906Azorhizobium caulinodans ORS 571, complete genomeputative chitinase3e-1477.8
NC_010943:3034366:3037592303759230385961005Stenotrophomonas maltophilia K279a, complete genomeputative bacteriophage protein9e-1476.3
NC_014330:1324500:133383613338361334414579Brachyspira pilosicoli 95/1000 chromosome, complete genomeendolysin glycoside hydrolase1e-1375.9
NC_013961:629307:6394816394816422432763Erwinia amylovora, complete genomehypothetical protein4e-1374.3
NC_013971:3117000:3129058312905831318202763Erwinia amylovora ATCC 49946 chromosome, complete genomechitinase4e-1374.3
NC_014500:4691915:4699276469927647015822307Dickeya dadantii 3937 chromosome, complete genomeEF hand domain-containing protein5e-1373.9
NC_011094:1923870:194398219439821944269288Salmonella enterica subsp. enterica serovar Schwarzengrund strlytic enzyme2e-1272
NC_011205:1391971:140140014014001401687288Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853lytic enzyme2e-1272
NC_014210:1625954:163517616351761636063888Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Chitinase4e-1270.9
NC_014118:1171411:1179632117963211821632532Burkholderia sp. CCGE1002 chromosome chromosome 2, completechitinase-like protein6e-1270.1
NC_014330:1593000:159658415965841597099516Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative Lys-endolysin; glycoside hydrolase4e-1167.4
NC_009439:101174:1085661085661117303165Pseudomonas mendocina ymp, complete genomeglycoside hydrolase family protein8e-1166.6
NC_014623:4788768:479649847964984797475978Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeglycoside hydrolase1e-1065.9
NC_005773:2177184:218469621846962184875180Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1065.5
NC_010717:3868000:3873652387365238765462895Xanthomonas oryzae pv. oryzae PXO99A, complete genomeEF hand domain protein3e-0961.2
NC_004578:5916711:5924253592425359262772025Pseudomonas syringae pv. tomato str. DC3000, complete genomeEF hand domain protein4e-0960.8
NC_003047:3419212:3435808343580834377271920Sinorhizobium meliloti 1021, complete genomePUTATIVE PROTEASE TRANSMEMBRANE PROTEIN8e-0960.1
NC_010102:1137247:115165111516511151881231Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-0960.1
NC_016810:1903426:192366219236621923892231Salmonella enterica subsp. enterica serovar Typhimurium str8e-0960.1
NC_016860:1943203:196163519616351961865231Salmonella enterica subsp. enterica serovar Typhimurium strlytic enzyme8e-0960.1
NC_010552:592154:6011786011786038052628Burkholderia ambifaria MC40-6 chromosome 2, complete sequencechitinase-like protein6e-0960.1
NC_003197:1945858:196609419660941966381288Salmonella typhimurium LT2, complete genomehypothetical protein1e-0859.3
NC_016856:1957263:197749919774991977786288Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-0859.3
NC_016857:1903426:192366219236621923949288Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74lytic enzyme1e-0859.3
NC_016863:1905454:192569019256901925977288Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein1e-0859.3
NC_008319:2335801:233892223389222339572651Synechococcus sp. CC9311, complete genomehypothetical protein3e-0857.8
NC_007347:1:2040320403227332331Ralstonia eutropha JMP134 chromosome 1, complete sequencehypothetical protein8e-0856.6
NC_018748:495011:4995694995695030123444Emticicia oligotrophica DSM 17448 chromosome, complete genomeFibronectin type III domain protein9e-0856.2
NC_010067:2529750:2539587253958725418032217Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-0754.3