Pre_GI: BLASTP Hits

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Query: NC_012125:1360593:1386501 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1386501, End: 1387310, Length: 810

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:1452927:147452414745241475333810Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein4e-121434
NC_012779:2619871:262328626232862624086801Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-87320
NC_016513:1859767:187470318747031875470768Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeinner membrane protein YfcA5e-74277
NC_013416:1526920:153955315395531540320768Aggregatibacter actinomycetemcomitans D11S-1, complete genomeinner membrane protein YfcA5e-74277
NC_010172:4185904:419190041919004192691792Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF812e-48192
NC_012988:4633930:463860746386074639398792Methylobacterium extorquens DM4, complete genomehypothetical protein2e-48192
NC_012808:4235567:424024642402464241037792Methylobacterium extorquens AM1, complete genomehypothetical protein5e-48191
NC_011757:4293000:429544942954494296240792Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF811e-46187
NC_002505:2537655:254839525483952549180786Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein7e-47187
NC_009457:2095366:210162721016272102412786Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein7e-47187
NC_012578:2479150:248541124854112486196786Vibrio cholerae M66-2 chromosome I, complete sequenceputative Inner membrane protein7e-47187
NC_012582:2626786:263304726330472633832786Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative Inner membrane protein7e-47187
NC_012668:1036000:104548610454861046271786Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein7e-47187
NC_016445:2012294:201855220185522019337786Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein7e-47187
NC_016944:2588435:259469325946932595478786Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein7e-47187
NC_017200:345502:351091351091351861771Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein2e-34145
NC_016779:312500:318945318945319715771Bacillus cereus F837/76 chromosome, complete genomehypothetical protein3e-34145
NC_014330:2409559:240955924095592410326768Brachyspira pilosicoli 95/1000 chromosome, complete genometransporter membrane1e-31137
NC_019908:852230:869858869858870625768Brachyspira pilosicoli P43/6/78 chromosome, complete genometransporter membrane1e-31137
NC_014012:3356629:337150033715003372273774Shewanella violacea DSS12, complete genomehypothetical protein2e-31136
NC_017068:130226:132382132382133146765Selenomonas ruminantium subsp. lactilytica TAM6421, completemembrane protein2e-31135
NC_007164:622000:652500652500653294795Corynebacterium jeikeium K411, complete genomehypothetical protein9e-31134
NC_012668:1623350:165034316503431651119777Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-30133
NC_015437:697051:697051697051697809759Selenomonas sputigena ATCC 35185 chromosome, complete genomeprotein of unknown function DUF811e-30133
NC_010674:3674739:367944636794463680195750Clostridium botulinum B str. Eklund 17B, complete genometransporter5e-30131
NC_010723:3530000:353662735366273537376750Clostridium botulinum E3 str. Alaska E43, complete genometransporter6e-30131
NC_010644:231486:234531234531235283753Elusimicrobium minutum Pei191, complete genomehypothetical protein3e-29129
NC_011663:3181579:320260832026083203381774Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-28127
NC_008321:2922000:294043429404342941207774Shewanella sp. MR-4, complete genomeprotein of unknown function DUF813e-28125
NC_008577:3125675:314095731409573141730774Shewanella sp. ANA-3 chromosome 1, complete sequenceprotein of unknown function DUF813e-28125
NC_008322:2983951:300111730011173001890774Shewanella sp. MR-7, complete genomeprotein of unknown function DUF815e-28124
NC_009092:2902171:292448029244802925253774Shewanella loihica PV-4, complete genomeprotein of unknown function DUF811e-25116
NC_015733:3736104:373949737394973740327831Pseudomonas putida S16 chromosome, complete genomehypothetical protein6e-25114
NC_008027:2331617:235545623554562356217762Pseudomonas entomophila L48, complete genomehypothetical protein3e-24112
NC_010572:5445081:546529154652915466085795Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein4e-24112
NC_015276:1037862:104442710444271045206780Marinomonas mediterranea MMB-1 chromosome, complete genomeprotein of unknown function DUF815e-24111
NC_015379:4630367:463117146311714631935765Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein, putative membrane protein2e-22106
NC_013959:1555799:157281115728111573578768Sideroxydans lithotrophicus ES-1 chromosome, complete genomeprotein of unknown function DUF812e-22106
NC_015677:285896:302473302473303231759Ramlibacter tataouinensis TTB310 chromosome, complete genomemembrane protein4e-2098.6
NC_014210:2638773:263961626396162640383768Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF817e-2097.8
NC_015556:2265940:227547522754752276242768Pseudomonas fulva 12-X chromosome, complete genomeprotein of unknown function DUF817e-1994.4
NC_009718:643200:668532668532669269738Fervidobacterium nodosum Rt17-B1, complete genomehypothetical protein5e-1891.7
NC_003919:5056650:508042750804275081206780Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-1789.7
NC_015434:3581001:359625935962593597038780Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein2e-1686.3
NC_011899:948790:964423964423965166744Halothermothrix orenii H 168, complete genomepredicted permease1e-1480.5
NC_013421:1143500:115253411525341153298765Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF811e-1480.5
NC_004547:1062410:106241010624101063174765Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein8e-1477.4
NC_014391:3596812:361355136135513614270720Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein3e-1375.9
NC_014815:5603000:561002456100245610743720Micromonospora sp. L5 chromosome, complete genomehypothetical protein3e-1375.9
NC_019673:189487:189487189487190329843Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-1375.9
NC_010321:947233:961528961528962283756Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein1e-1170.1
NC_014964:923681:953721953721954476756Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein1e-1170.1
NC_014538:1075720:109003010900301090785756Thermoanaerobacter sp. X513 chromosome, complete genomehypothetical protein4e-1168.6
NC_010320:1860801:186355918635591864314756Thermoanaerobacter sp. X514 chromosome, complete genomehypothetical protein4e-1168.6
NC_020209:945000:952807952807953370564Pseudomonas poae RE*1-1-14, complete genomehypothetical protein1e-0963.5
NC_017093:1411532:143141014314101432177768Actinoplanes missouriensis 431, complete genomehypothetical protein5e-0961.6
NC_013943:2857751:287535928753592876114756Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomehypothetical protein4e-0858.5
NC_018750:1591895:160375316037531604526774Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-0757
NC_016625:171341:172509172509173327819Burkholderia sp. YI23 chromosome 2, complete sequencehypothetical protein2e-0653.5