Pre_GI: BLASTP Hits

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Query: NC_011961:891815:907943 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 907943, End: 909493, Length: 1551

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009380:3043140:3055726305572630572761551Salinispora tropica CNB-440 chromosome, complete genome4-hydroxyphenylacetate 3-hydroxylase5e-174610
NC_006361:4521820:4527382452738245290011620Nocardia farcinica IFM 10152, complete genomeputative phenol hydroxylase large subunit2e-172605
NC_010067:1829041:1829041182904118306031563Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-153543
NC_011149:1035990:1055716105571610572781563Salmonella enterica subsp. enterica serovar Agona str. SL483,4-hydroxyphenylacetate 3-monooxygenase, oxygenase component2e-153542
NC_010102:2020762:2020762202076220223241563Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-153542
NC_011083:1173802:1190452119045211920141563Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4-hydroxyphenylacetate 3-monooxygenase, oxygenase component2e-153542
NC_011080:1166951:1188062118806211896241563Salmonella enterica subsp. enterica serovar Newport str. SL254,4-hydroxyphenylacetate 3-monooxygenase, oxygenase component2e-153542
NC_003197:1170746:1185726118572611872881563Salmonella typhimurium LT2, complete genome4-hydroxyphenylacetate catabolism2e-153542
NC_011094:1127983:1144397114439711459591563Salmonella enterica subsp. enterica serovar Schwarzengrund str4-hydroxyphenylacetate 3-monooxygenase, oxygenase component2e-153542
NC_011147:1802535:1806219180621918077811563Salmonella enterica subsp. enterica serovar Paratyphi A str4-hydroxyphenylacetate 3-monooxygenase2e-153542
NC_011274:1057887:1072863107286310744251563Salmonella enterica subsp. enterica serovar Gallinarum str. 287/914-hydroxyphenylacetate 3-monooxygenase2e-153542
NC_011294:1048223:1063574106357410651361563Salmonella enterica subsp. enterica serovar Enteritidis str4-hydroxyphenylacetate 3-monooxygenase2e-153542
NC_012125:2687980:2687980268798026895421563Salmonella enterica subsp. enterica serovar Paratyphi C strain4-hydroxyphenylacetate catabolism2e-153542
NC_016856:1128715:1144070114407011456321563Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S4-hydroxyphenylacetate catabolism2e-153542
NC_016860:1168431:1183411118341111849731563Salmonella enterica subsp. enterica serovar Typhimurium str4-hydroxyphenylacetate 3-monooxygenase2e-153542
NC_016863:1128381:1143361114336111449231563Salmonella enterica subsp. enterica serovar Typhimurium str. UK-14-hydroxyphenylacetate catabolism2e-153542
NC_016831:1950650:1950650195065019522121563Salmonella enterica subsp. enterica serovar Gallinarum/pullorum4-hydroxyphenylacetate 3-monooxygenase5e-153541
NC_016810:1126693:1142048114204811436101563Salmonella enterica subsp. enterica serovar Typhimurium str4-hydroxyphenylacetate 3-monooxygenase1e-152540
NC_016857:1126693:1142048114204811436101563Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/744-hydroxyphenylacetate catabolism1e-152540
NC_017046:1127325:1142305114230511438671563Salmonella enterica subsp. enterica serovar Typhimurium str. 7984-hydroxyphenylacetate 3-monooxygenase1e-152540
NC_011205:1147556:1164223116422311657851563Salmonella enterica subsp. enterica serovar Dublin str. CT_020218534-hydroxyphenylacetate 3-monooxygenase, oxygenase component9e-153540
NC_010468:4059436:4060577406057740621391563Escherichia coli ATCC 8739, complete genome4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit2e-150532
NC_012962:1041518:1041518104151810430801563Photorhabdus asymbiotica, complete genome4-hydroxyphenylacetate 3-monooxygenase, oxygenase component (4-hpa 3 monooxygenase large component) (4-hpa 3-hydroxylase)2e-148526
NC_014831:2133060:2144177214417721457091533Thermaerobacter marianensis DSM 12885 chromosome, complete genome4-hydroxyphenylacetate 3-hydroxylase9e-146517
NC_003198:1078113:1096182109618210974891308Salmonella enterica subsp. enterica serovar Typhi str. CT18,4-hydroxyphenylacetate 3-monooxygenase6e-124444
NC_004631:1881214:1883324188332418846311308Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4-hydroxyphenylacetate 3-monooxygenase6e-124444
NC_006511:1808815:1811291181129118125981308Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4-hydroxyphenylacetate 3-monooxygenase6e-124444
NC_016832:1880174:1880174188017418814811308Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,4-hydroxyphenylacetate 3-monooxygenase oxygenase component6e-124444
NC_015312:3290887:3295751329575132973341584Pseudonocardia dioxanivorans CB1190 chromosome, complete genome4-hydroxyphenylacetate 3-hydroxylase6e-117421
NC_009328:3241166:3260439326043932619231485Geobacillus thermodenitrificans NG80-2 chromosome, complete genomearomatic compound hydroxylase5e-68258
NC_016943:1356419:1368390136839013698351446Blastococcus saxobsidens DD2, complete genome4-hydroxyphenylacetate 3-hydroxylase9e-68258
NC_011961:891815:9103979103979118751479Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencepyoverdin chromophore biosynthetic protein PvcC1e-66254
NC_009937:4768500:4768989476898947704731485Azorhizobium caulinodans ORS 571, complete genome4-hydroxyphenylacetate 3-hydroxylase1e-64248
NC_013524:392089:4129344129344144091476Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genome4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit2e-60233
NC_014650:475662:5011685011685026431476Geobacillus sp. Y4.1MC1 chromosome, complete genome4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit3e-53209
NC_012623:1631985:1648336164833616498111476Sulfolobus islandicus Y.N.15.51 chromosome, complete genome4-hydroxyphenylacetate 3-hydroxylase2e-47190
NC_012622:940990:9409909409909424651476Sulfolobus islandicus Y.G.57.14 chromosome, complete genome4-hydroxyphenylacetate 3-hydroxylase2e-47190
NC_012589:842270:8422708422708437451476Sulfolobus islandicus L.S.2.15, complete genome4-hydroxyphenylacetate 3-hydroxylase4e-47189
NC_012588:620353:6395956395956410701476Sulfolobus islandicus M.14.25 chromosome, complete genome4-hydroxyphenylacetate 3-hydroxylase2e-46187
NC_012632:638347:6575896575896590641476Sulfolobus islandicus M.16.27 chromosome, complete genome4-hydroxyphenylacetate 3-hydroxylase2e-46187
NC_012726:641763:6613256613256628001476Sulfolobus islandicus M.16.4 chromosome, complete genome4-hydroxyphenylacetate 3-hydroxylase2e-46187
NC_017276:675229:6752296752296767041476Sulfolobus islandicus REY15A chromosome, complete genome4-hydroxyphenylacetate 3-hydroxylase2e-46186
NC_017275:594951:6142726142726157471476Sulfolobus islandicus HVE10/4 chromosome, complete genome4-hydroxyphenylacetate 3-hydroxylase2e-46186
NC_016885:1153277:1172821117282111742961476Pyrobaculum oguniense TE7 chromosome, complete genomeAromatic ring hydroxylase1e-44181
NC_008148:1859888:1882606188260618840571452Rubrobacter xylanophilus DSM 9941, complete genome4-hydroxyphenylacetate 3-hydroxylase5e-43176
NC_015873:380485:3912593912593927101452Megasphaera elsdenii DSM 20460, complete genome4-hydroxyphenylacetate 3-hydroxylase family protein1e-24115
NC_016048:2678205:2713200271320027146871488Oscillibacter valericigenes Sjm18-20, complete genomegamma-aminobutyrate metabolism dehydratase/isomerase1e-22108
NC_012589:260703:2697462697462711371392Sulfolobus islandicus L.S.2.15, complete genomeVinylacetyl-CoA Delta-isomerase3e-22106
NC_012623:2555000:2563526256352625649171392Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeVinylacetyl-CoA Delta-isomerase3e-22106
NC_012726:255774:2673952673952687861392Sulfolobus islandicus M.16.4 chromosome, complete genomeVinylacetyl-CoA Delta-isomerase8e-22105
NC_012632:243982:2556032556032569941392Sulfolobus islandicus M.16.27 chromosome, complete genomeVinylacetyl-CoA Delta-isomerase8e-22105
NC_016610:1574699:1587995158799515894551461Tannerella forsythia ATCC 43037 chromosome, complete genomegamma-aminobutyrate metabolism dehydratase/isomerase8e-22105
NC_017179:2539031:2545973254597325474691497Clostridium difficile BI1, complete genomegamma-aminobutyrate metabolism dehydratase/isomerase2e-1997.8
NC_013315:2531019:2537961253796125394571497Clostridium difficile CD196 chromosome, complete genomegamma-aminobutyrate metabolism dehydratase/isomerase2e-1997.8
NC_007517:2494000:2506050250605025075011452Geobacter metallireducens GS-15, complete genome4-hydroxyphenylacetate 3-hydroxylase2e-1997.4
NC_014820:1:1637816378179011524Cenarchaeum symbiosum A, complete genome4-hydroxybutyryl-CoA dehydratase3e-1997.1
NC_008701:195850:2420842420842435801497Pyrobaculum islandicum DSM 4184, complete genomeVinylacetyl-CoA delta-isomerase2e-1894
NC_007503:1534162:1546170154617015475971428Carboxydothermus hydrogenoformans Z-2901, complete genome4-hydroxyphenylacetate 3-hydroxylase family protein3e-1687
NC_009454:1246393:1261669126166912631111443Pelotomaculum thermopropionicum SI, complete genomearomatic ring hydroxylase6e-1685.9
NC_008554:4781500:4789849478984947913121464Syntrophobacter fumaroxidans MPOB, complete genome4-hydroxyphenylacetate 3-hydroxylase9e-1582
NC_007759:723675:7236757236757251141440Syntrophus aciditrophicus SB, complete genomearomatic ring hydroxylase1e-1378.6
NC_007181:1963887:1971870197187019733871518Sulfolobus acidocaldarius DSM 639, complete genomegamma-aminobutyrate metabolism dehydratase/isomerase5e-1376.3
NC_016885:2294000:2300974230097423023681395Pyrobaculum oguniense TE7 chromosome, complete genomeAromatic ring hydroxylase2e-0964.3