Pre_GI: BLASTP Hits

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Query: NC_011770:2804218:2807081 Pseudomonas aeruginosa LESB58, complete genome

Start: 2807081, End: 2807305, Length: 225

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011992:1179084:119655611965561196912357Acidovorax ebreus TPSY, complete genometranscriptional regulator, ArsR family2e-37154
NC_008750:1253354:127078312707831271136354Shewanella sp. W3-18-1, complete genomeregulatory protein, ArsR4e-34142
NC_011770:2804218:281864628186462819023378Pseudomonas aeruginosa LESB58, complete genometranscriptional regulator, ArsR family2e-24111
NC_009668:529175:544473544473544787315Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceregulatory protein ArsR4e-24109
NC_007626:4038054:406044740604474060731285Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator6e-1579.3
NC_008750:1253354:127357412735741273852279Shewanella sp. W3-18-1, complete genomeregulatory protein, ArsR3e-1167.4
NC_014328:180482:183193183193183558366Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator2e-0857.8
NC_008262:2498000:251577325157732516132360Clostridium perfringens SM101, complete genometranscription repressor smtb-like protein PAB06253e-0857.4
NC_014410:800500:837621837621837995375Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, ArsR family9e-0855.5
NC_010003:449192:466448466448466822375Petrotoga mobilis SJ95, complete genometranscriptional regulator, ArsR family9e-0855.5
NC_007681:121150:134798134798135172375Methanosphaera stadtmanae DSM 3091, complete genomepredicted transcriptional regulator1e-0755.5
NC_016633:3069518:313530331353033135677375Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative transcriptional regulator1e-0755.5
NC_014976:170683:196266196266196589324Bacillus subtilis BSn5 chromosome, complete genomeArsR-SmtB repressors family transcriptional regulator1e-0755.1
NC_013171:1506500:151544715154471515749303Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, ArsR family1e-0755.1
NC_010320:1268355:131352813135281313902375Thermoanaerobacter sp. X514 chromosome, complete genomeregulatory protein ArsR2e-0754.7
NC_014538:1598106:160048016004801600854375Thermoanaerobacter sp. X513 chromosome, complete genomeArsR family transcriptional regulator2e-0754.7
NC_010376:49185:701447014470512369Finegoldia magna ATCC 29328, complete genomeArsR family transcriptional regulator3e-0754.3
NC_007907:5185510:525847652584765258850375Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0754.3
UCMB5137:1594000:161395216139521614284333Bacillus atrophaeus UCMB-5137YozA2e-0754.3
NC_016627:4323370:432693843269384327312375Clostridium clariflavum DSM 19732 chromosome, complete genomeputative transcriptional regulator3e-0753.9
NC_010723:371741:372447372447372812366Clostridium botulinum E3 str. Alaska E43, complete genomecadmium efflux system accessory protein4e-0753.5
NC_004113:1026886:104411310441131044508396Thermosynechococcus elongatus BP-1, complete genometranscriptional repressor SmtB homolog4e-0753.5
NC_006510:591339:604869604869605177309Geobacillus kaustophilus HTA426, complete genometranscriptional regulator (ArsR family)7e-0752.8
NC_016593:596500:608492608492608800309Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, ArsR7e-0752.8
NC_013316:371953:375379375379375744366Clostridium difficile R20291, complete genomeArsR-family transcriptional regulator7e-0752.8
NC_009089:370555:373980373980374345366Clostridium difficile 630, complete genomeArsR-family transcriptional regulator7e-0752.8
NC_017068:2661419:266605526660552666432378Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative ArsR family transcriptional regulator6e-0752.8
NC_009850:1862602:186473018647301865071342Arcobacter butzleri RM4018, complete genometranscriptional regulator, ArsR family9e-0752.4
NC_010674:370629:377104377104377469366Clostridium botulinum B str. Eklund 17B, complete genomecadmium efflux system accessory protein1e-0652
NC_016768:1769332:177193717719371772344408Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeArsR family transcriptional regulator1e-0651.6
NC_012943:1769445:177205017720501772457408Mycobacterium tuberculosis KZN 1435 chromosome, complete genometranscriptional regulator, arsR-family1e-0651.6
NC_015848:2684275:269985926998592700266408Mycobacterium canettii CIPT 140010059, complete genomeputative transcriptional regulatory protein1e-0651.6
NC_009525:2635792:265321426532142653621408Mycobacterium tuberculosis H37Ra, complete genomeArsR family transcriptional regulator1e-0651.6
NC_007907:960104:100435610043561004730375Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0651.2
NC_008726:3947917:396294739629473963306360Mycobacterium vanbaalenii PYR-1, complete genomeregulatory protein, ArsR2e-0651.2
NC_014377:1400544:141702714170271417401375Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, ArsR family2e-0651.2
NC_016791:3953972:397167439716743972030357Clostridium sp. BNL1100 chromosome, complete genomeputative transcriptional regulator3e-0650.4
NC_016887:1680338:169785716978571698207351Nocardia cyriacigeorgica GUH-2, complete genomeputative transcriptional regulator4e-0650.1
NC_017297:564727:577459577459577824366Clostridium botulinum F str. 230613 chromosome, complete genomeputative cadmium resistance transcriptional regulator CadC5e-0649.7
NC_009699:564455:577188577188577553366Clostridium botulinum F str. Langeland chromosome, complete genomecadmium resistance transcriptional regulator CadC5e-0649.7
NC_021182:2059143:205914320591432059550408Clostridium pasteurianum BC1, complete genomeputative transcriptional regulator6e-0649.3
NC_013205:1123280:117567911756791176059381Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, ArsR family7e-0649.3
NC_010612:4501414:451756645175664517961396Mycobacterium marinum M, complete genometranscriptional regulatory protein (probably ArsR-family)9e-0648.9
NC_010516:583870:593892593892594257366Clostridium botulinum B1 str. Okra, complete genomeputative cadmium resistance transcriptional regulator CadC1e-0548.9