Pre_GI: BLASTP Hits

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Query: NC_011369:758000:771620 Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete

Start: 771620, End: 772216, Length: 597

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014217:16398:272232722327813591Starkeya novella DSM 506 chromosome, complete genomeglycoside hydrolase family 245e-34144
NC_014625:1187608:119310411931041193646543Ketogulonicigenium vulgare Y25 chromosome, complete genomelysozyme1e-1685.9
NC_014834:3130715:316288031628803163509630Rhodopseudomonas palustris DX-1 chromosome, complete genomeglycoside hydrolase family protein3e-1581.6
NC_010554:539122:544072544072544542471Proteus mirabilis HI4320, complete genomephage lysozome1e-1169.7
NC_008783:222000:239158239158239820663Bartonella bacilliformis KC583, complete genomephage lysozyme3e-1168.2
NC_009778:2993218:300551030055103006004495Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-1167
NC_011283:3379181:340580434058043406307504Klebsiella pneumoniae 342 chromosome, complete genomephage lysozyme2e-1065.5
NC_013850:1887556:191084719108471911350504Klebsiella variicola At-22 chromosome, complete genomeLysozyme2e-1065.5
NC_007963:1582089:158255615825561583029474Chromohalobacter salexigens DSM 3043, complete genomeglycoside hydrolase, family 243e-1065.1
NC_011751:643976:663288663288663785498Escherichia coli UMN026 chromosome, complete genomeputative lysozyme; DLP12 prophage7e-1063.9
NC_011415:1472500:149690314969031497400498Escherichia coli SE11 chromosome, complete genomeputative phage lysozyme9e-1063.5
NC_011740:2769961:277569627756962776193498Escherichia fergusonii ATCC 35469, complete genomeputative lysozyme; DLP12 prophage9e-1063.5
NC_008563:1475500:148441314844131484910498Escherichia coli APEC O1, complete genomephage-related lysozyme (muraminidase)1e-0963.2
NC_012947:3231893:323610032361003236597498Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeLysozyme1e-0963.2
NC_012967:531000:549082549082549579498Escherichia coli B str. REL606 chromosome, complete genomeputative lysozyme1e-0963.2
NC_007946:1239278:125842812584281258925498Escherichia coli UTI89, complete genomeprobable lysozyme from lambdoid prophage DLP121e-0963.2
NC_008563:1175035:119581511958151196312498Escherichia coli APEC O1, complete genomebacteriophage lambda lysozyme-like protein1e-0963.2
NC_011742:1177946:119933711993371199834498Escherichia coli S88 chromosome, complete genomelysozyme; DLP12 prophage1e-0963.2
NC_013941:699286:715761715761716258498Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLysozyme1e-0963.2
NC_013361:3112023:311794331179433118440498Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendolysin1e-0962.8
NC_007712:2287053:230171723017172302202486Sodalis glossinidius str. 'morsitans', complete genomephage lysozyme lysis protein2e-0962.4
NC_000913:558920:576836576836577333498Escherichia coli K12, complete genomeDLP12 prophage; predicted lysozyme2e-0962.4
NC_010473:498252:516168516168516665498Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted lysozyme2e-0962.4
AC_000091:558920:576836576836577333498Escherichia coli W3110 DNA, complete genomepredicted lysozyme2e-0962.4
NC_010473:623810:629428629428629925498Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted lysozyme2e-0962.4
NC_012759:461680:479596479596480093498Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative lysozyme2e-0962.4
NC_015968:3301958:330573533057353306175441Enterobacter asburiae LF7a chromosome, complete genomeglycoside hydrolase family protein2e-0962.4
NC_010161:1179000:118996111899611190623663Bartonella tribocorum CIP 105476, complete genomephage-related lysozyme2e-0962
NC_007712:2649940:266023226602322660717486Sodalis glossinidius str. 'morsitans', complete genomephage lysozyme lysis protein2e-0962
NC_007712:2806500:280841428084142808863450Sodalis glossinidius str. 'morsitans', complete genomephage lysozyme lysis protein4e-0961.6
NC_007384:2933625:293362529336252934122498Shigella sonnei Ss046, complete genomelysozyme-like protein3e-0961.6
NC_013364:2898964:290789729078972908394498Escherichia coli O111:H- str. 11128, complete genomeputative endolysin3e-0961.6
CU928145:824367:838503838503839000498Escherichia coli 55989 chromosome, complete genomeputative lysozyme; DLP12 prophage3e-0961.6
NC_011748:824367:838503838503839000498Escherichia coli 55989, complete genomeputative lysozyme; DLP12 prophage3e-0961.6
NC_011740:2072173:210083821008382101335498Escherichia fergusonii ATCC 35469, complete genomeputative lysozyme; DLP12 prophage3e-0961.6
NC_010161:2235500:223941122394112240073663Bartonella tribocorum CIP 105476, complete genomephage-related lysozyme3e-0961.6
NC_009783:1956000:197368919736891974168480Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein3e-0961.6
NC_011094:593100:618243618243618740498Salmonella enterica subsp. enterica serovar Schwarzengrund strphage lysozyme5e-0960.8
NC_016514:2476359:249661224966122497106495Enterobacter cloacae EcWSU1 chromosome, complete genomelysozyme from lambdoid prophage DLP125e-0960.8
NC_015663:4767443:477342247734224773925504Enterobacter aerogenes KCTC 2190 chromosome, complete genomelysozyme-like protein6e-0960.5
NC_013282:551219:553855553855554361507Cronobacter turicensis, complete genomeLysozyme1e-0859.7
NC_007954:3887488:389079138907913891270480Shewanella denitrificans OS217, complete genomeglycoside hydrolase, family 242e-0858.9
NC_011083:374000:393293393293393796504Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phage lysozyme2e-0858.5
NC_007434:1809946:181799218179921818483492Burkholderia pseudomallei 1710b chromosome I, complete sequencegp244e-0858.2
NC_020418:2084937:209663520966352097111477Morganella morganii subsp. morganii KT, complete genomeLysozyme6e-0857.4
NC_007712:1516589:154075015407501541226477Sodalis glossinidius str. 'morsitans', complete genomephage lysozyme lysis protein6e-0857.4
NC_017046:2756000:275649427564942756958465Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage lysozyme1e-0756.2
NC_008800:2013450:202200720220072022489483Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,bacteriophage lysozyme2e-0755.8
NC_021066:2226826:223273422327342233231498Raoultella ornithinolytica B6, complete genomephage lysozyme2e-0755.8
NC_012846:1147000:115919611591961159861666Bartonella grahamii as4aup, complete genomephage related lysozyme2e-0755.5
NC_007712:1182518:121514712151471215644498Sodalis glossinidius str. 'morsitans', complete genomephage lysozyme lysis protein2e-0755.5
NC_011294:1220526:123591912359191236371453Salmonella enterica subsp. enterica serovar Enteritidis strphage lysozyme3e-0755.1
NC_011205:1345511:137179213717921372241450Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage lysozyme3e-0755.1
NC_016831:1734292:174137717413771741826450Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage lysozyme3e-0755.1
NC_016612:3803130:382579838257983826328531Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative endolysin R of prophage CP-933V3e-0755.1
NC_020181:2097066:210213521021352102668534Enterobacter aerogenes EA1509E, complete genomePhage lysin3e-0755.1
NC_012846:986877:102041410204141021076663Bartonella grahamii as4aup, complete genomephage related lysozyme4e-0754.7
NC_005956:1019788:102261610226161023281666Bartonella henselae str. Houston-1, complete genomePhage related lysozyme4e-0754.3
NC_009778:1556222:157412115741211574609489Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0652.8
NC_020260:1615135:163303316330331633518486Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-0652.8
NC_015224:2095816:210804621080462108501456Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,bacteriophage lysozyme2e-0652.4
NC_014121:3627588:365936736593673659861495Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage lysozyme7e-0650.4