Pre_GI: BLASTP Hits

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Query: NC_011368:678291:688080 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201,

Start: 688080, End: 688868, Length: 789

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:4066926:409996140999614100752792Methylobacterium nodulans ORS 2060, complete genomeABC-2 type transporter, NodJ family6e-89327
NC_000914:135534:154120154120154908789Rhizobium sp. NGR234 plasmid pNGR234a, complete sequenceNodJ2e-86318
NC_019973:5989816:599775759977575998545789Mesorhizobium australicum WSM2073, complete genomeABC-2 type transporter, NodJ family3e-85314
NC_014923:6060859:606880060688006069588789Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeABC-2 type transporter, NodJ family3e-85314
NC_015675:6615245:662346866234686624256789Mesorhizobium opportunistum WSM2075 chromosome, complete genomeABC transporter, NodJ family3e-85314
NC_010511:4258000:426666442666644267452789Methylobacterium sp. 4-46 chromosome, complete genomeABC transporter1e-81302
NC_010529:296500:306893306893307681789Cupriavidus taiwanensis plasmid pRALTA, complete sequenceNodJ membrane transport nodulation protein, ABC-type transporter1e-77289
NC_004463:2158116:219009521900952190883789Bradyrhizobium japonicum USDA 110, complete genomeNodJ protein6e-77287
NC_017249:7993713:808709980870998087887789Bradyrhizobium japonicum USDA 6, complete genomeNodJ protein6e-77287
NC_015381:2109500:213320721332072134043837Burkholderia gladioli BSR3 chromosome 1, complete sequenceABC transporter2e-72272
NC_008702:369965:375522375522376307786Azoarcus sp. BH72, complete genomeABC transporter permease NodJ7e-60230
NC_015677:3685452:368858836885883689385798Ramlibacter tataouinensis TTB310 chromosome, complete genomeABC transporter permease6e-41167
NC_009937:4350132:436599443659944366758765Azorhizobium caulinodans ORS 571, complete genomenodulation protein J2e-35149
NC_013169:2581500:259965825996582600458801Kytococcus sedentarius DSM 20547, complete genomeABC-type polysaccharide/polyol phosphate export systems, permease component9e-23107
NC_019673:1456999:147587614758761476646771Saccharothrix espanaensis DSM 44229 complete genomeABC-type transporter7e-1994.4
NC_019673:1456999:147665114766511477484834Saccharothrix espanaensis DSM 44229 complete genomeABC-2 type transporter4e-1891.7
NC_009380:3903392:392565839256583926467810Salinispora tropica CNB-440 chromosome, complete genomeABC transporter7e-1684.3
NC_015416:1872000:188664518866451887382738Methanosaeta concilii GP-6 chromosome, complete genomeABC-2 type transporter1e-1170.5
NC_017506:1832443:183398418339841834745762Marinobacter adhaerens HP15 chromosome, complete genomeABC transporter permease8e-1167.8
NC_011832:1148859:115521411552141155978765Candidatus Methanosphaerula palustris E1-9c, complete genomedaunorubicin resistance ABC transporter, inner membrane subunit B1e-1066.6
NC_018870:354164:358671358671359405735Thermacetogenium phaeum DSM 12270 chromosome, complete genomeABC-2 type transporter2e-1066.6
NC_008740:1635137:163760316376031638364762Marinobacter aquaeolei VT8, complete genomeABC-2 type transporter2e-1065.9
NC_014408:1340016:135862013586201359384765Methanothermobacter marburgensis str. Marburg chromosome, completeABC transporter, permease component4e-1065.5
NC_015574:2322811:2341886234188623430701185Methanobacterium sp. SWAN-1 chromosome, complete genomeABC-2 type transporter9e-1064.3
NC_015573:2187688:220656622065662207357792Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC-2 type transporter2e-0962.8
NC_019792:3027515:303607230360723036989918Natronobacterium gregoryi SP2 chromosome, complete genomemultidrug ABC transporter permease1e-0860.8
NC_014323:4665610:466561046656104666374765Herbaspirillum seropedicae SmR1 chromosome, complete genomemultidrug ABC transporter permease1e-0860.5
NC_020389:2473160:248907424890742489838765Methanosarcina mazei Tuc01, complete genomeABC transporter, permease protein1e-0860.5
NC_003901:2906493:292788829278882928652765Methanosarcina mazei Go1, complete genomeABC transporter, permease protein1e-0860.5
NC_003272:5040500:505527050552705056097828Nostoc sp. PCC 7120, complete genomehypothetical protein2e-0859.7
NC_007413:868678:870628870628871455828Anabaena variabilis ATCC 29413, complete genomeABC-23e-0859.3
NC_011832:2668337:269223726922372692986750Candidatus Methanosphaerula palustris E1-9c, complete genomedaunorubicin resistance ABC transporter, inner membrane subunit B4e-0858.9
NC_015574:1474967:149486814948681495620753Methanobacterium sp. SWAN-1 chromosome, complete genomedaunorubicin resistance ABC transporter, inner membrane subunit B3e-0858.9
NC_018643:754104:781614781614782381768Alpha proteobacterium HIMB5 chromosome, complete genomeABC-2 type transporter3e-0858.9
NC_013510:2782240:280139728013972802263867Thermomonospora curvata DSM 43183, complete genomeABC-2 type transporter4e-0858.5
NC_013169:2581500:259874725987472599661915Kytococcus sedentarius DSM 20547, complete genomeABC-type multidrug transport system, permease component5e-0858.5
NC_007796:1731500:175867317586731759422750Methanospirillum hungatei JF-1, complete genomeABC-25e-0858.2
NC_009092:3732390:373391837339183734706789Shewanella loihica PV-4, complete genomeABC-2 type transporter1e-0757.4
NC_011740:165363:165363165363166133771Escherichia fergusonii ATCC 35469, complete genomeputative transporter subunit: membrane component of ABC superfamily3e-0755.8
CU928145:143755:143755143755144525771Escherichia coli 55989 chromosome, complete genomeputative transporter subunit: membrane component of ABC superfamily4e-0755.1
AP010958:143358:145052145052145822771Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transporter subunit4e-0755.1
NC_004431:153907:153907153907154677771Escherichia coli CFT073, complete genomeHypothetical protein yadH4e-0755.1
NC_010468:3835259:385511138551113855881771Escherichia coli ATCC 8739, complete genomeABC-2 type transporter4e-0755.1
NC_007946:149733:149733149733150503771Escherichia coli UTI89, complete genomehypothetical protein4e-0755.1
CP002516:3949061:396612339661233966893771Escherichia coli KO11, complete genomeABC-2 type transporter4e-0755.1
NC_008563:149709:149709149709150479771Escherichia coli APEC O1, complete genomehypothetical protein4e-0755.1
NC_010498:153755:153755153755154525771Escherichia coli SMS-3-5, complete genomeABC transporter, permease protein4e-0755.1
NC_011748:143755:143755143755144525771Escherichia coli 55989, complete genomeputative transporter subunit: membrane component of ABC superfamily4e-0755.1
NC_009801:143426:145120145120145890771Escherichia coli E24377A, complete genomeABC transporter, permease protein4e-0755.1
NC_011601:149428:149428149428150198771Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransporter subunit: membrane component of ABC superfamily4e-0755.1
NC_016902:3949061:396612339661233966893771Escherichia coli KO11FL chromosome, complete genomeABC transporter4e-0755.1
NC_013364:143492:145186145186145956771Escherichia coli O111:H- str. 11128, complete genomeputative transporter subunit4e-0755.1
NC_013361:145461:146384146384147154771Escherichia coli O26:H11 str. 11368 chromosome, complete genometransporter subunit4e-0755.1
NC_013353:143358:145052145052145822771Escherichia coli O103:H2 str. 12009, complete genometransporter subunit4e-0755.1
NC_012967:145582:146505146505147275771Escherichia coli B str. REL606 chromosome, complete genomeputative transporter subunit membrane component of ABC superfamily4e-0755.1
NC_012947:3619384:363644636364463637216771Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeABC transporter4e-0755.1
NC_011745:149594:149594149594150364771Escherichia coli ED1a chromosome, complete genomeputative ABC transporter membrane protein4e-0755.1
NC_011742:149732:149732149732150502771Escherichia coli S88 chromosome, complete genometransporter subunit: membrane component of ABC superfamily4e-0755.1
NC_018677:73254:732547325474015762Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeABC-type multidrug transport system permease component1e-0653.9
NC_018507:79686:796867968680447762Candidatus Portiera aleyrodidarum BT-B chromosome, complete genomeABC-type polysaccharide/polyol phosphate export systems permease1e-0653.9
NC_017030:572871:577197577197577958762Corallococcus coralloides DSM 2259 chromosome, complete genomeABC transporter permease2e-0653.1
NC_015573:2187688:220752122075212208357837Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC-2 type transporter2e-0653.1
NC_018644:137755:141801141801142562762Alpha proteobacterium HIMB59 chromosome, complete genomeABC-2 type transporter2e-0652.8
NC_013947:5431741:5453971545397154550471077Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeABC-2 type transporter3e-0652.4
NC_015733:1680500:169946016994601700233774Pseudomonas putida S16 chromosome, complete genomeABC transporter permease5e-0651.6