Pre_GI: BLASTP Hits

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Query: NC_011205:2462025:2465388 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2465388, End: 2465852, Length: 465

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:2342672:234570623457062346548843Salmonella enterica subsp. enterica serovar Newport str. SL254,side tail fiber protein9e-74275
NC_010102:683444:701098701098701889792Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-73275
NC_003197:2327474:234392023439202344711792Salmonella typhimurium LT2, complete genomeputative tail fiber protein of phage1e-73275
NC_016832:687000:703004703004703795792Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Side tail fiber protein1e-73275
NC_016856:2379027:239547323954732396264792Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative tail fiber protein of phage1e-73275
NC_016857:2325190:234163623416362342427792Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74side tail fiber protein1e-73275
NC_016860:2323017:233946323394632340254792Salmonella enterica subsp. enterica serovar Typhimurium strside tail fiber protein1e-73275
NC_016863:2324293:234366523436652344456792Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative tail fiber protein of phage1e-73275
NC_017046:2324554:234100023410002341791792Salmonella enterica subsp. enterica serovar Typhimurium str. 7981e-73275
NC_016810:2325190:234163623416362342463828Salmonella enterica subsp. enterica serovar Typhimurium str9e-74275
NC_011083:2375061:239150023915002392291792Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-73275
NC_003198:2297837:230113623011362301918783Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-73274
NC_012125:1517925:153561915356191536410792Salmonella enterica subsp. enterica serovar Paratyphi C straintail fiber protein of phage3e-73273
NC_006905:2355290:235820423582042358995792Salmonella enterica subsp. enterica serovar Choleraesuis strputative tail fiber protein of phage4e-73272
NC_006905:1342474:1346171134617113488492679Salmonella enterica subsp. enterica serovar Choleraesuis strside tail fiber protein9e-69258
NC_016857:2719779:2732413273241327347852373Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74tail fiber-like protein1e-62238
NC_016863:2721826:2734460273446027368322373Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1tail fiber-like protein1e-62238
NC_011080:2722492:2734758273475827371302373Salmonella enterica subsp. enterica serovar Newport str. SL254,side tail fiber protein1e-62238
NC_003197:2720726:2734726273472627370982373Salmonella typhimurium LT2, complete genometail fiber-like protein1e-62238
NC_016856:2773995:2786255278625527886272373Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stail fiber-like protein1e-62238
NC_016860:2716152:2730134273013427325062373Salmonella enterica subsp. enterica serovar Typhimurium strside tail fiber protein1e-62238
NC_017046:2717810:2731792273179227331171326Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA recombinase-like protein1e-62238
NC_016810:2719779:2732413273241327347852373Salmonella enterica subsp. enterica serovar Typhimurium strDNA recombinase1e-62238
NC_016856:1326503:1326503132650313289442442Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sside tail fiber protein1e-57221
NC_011205:1391971:1393043139304313954602418Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853side tail fiber protein8e-56215
NC_011094:1923870:1940354194035419416821329Salmonella enterica subsp. enterica serovar Schwarzengrund strside tail fiber protein9e-39159
NC_005815:61148:2928292858642937Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completephage lambda-related protein2e-38157
NC_016831:1690811:170987217098721710468597Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-36150
NC_010102:1137247:115424311542431154773531Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-31134
NC_007613:1353500:1373323137332313754732151Shigella boydii Sb227, complete genomeputative bacteriophage tail protein2e-27121
NC_010658:1772994:1774417177441717761291713Shigella boydii CDC 3083-94, complete genomegpH2e-26118
NC_003198:4453457:4483135448313544847541620Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable phage tail fibre protein2e-24111
NC_020908:4093560:4111224411122441122491026Octadecabacter arcticus 238, complete genomehypothetical protein4e-0960.5
NC_011751:1377457:1393488139348813965143027Escherichia coli UMN026 chromosome, complete genomeSide tail fiber protein from bacteriophage origin1e-0858.9
NC_011002:564654:5747005747005770572358Burkholderia cenocepacia J2315 chromosome 3, complete sequencehypothetical protein6e-0856.6
NC_013361:649518:6543596543596573192961Escherichia coli O26:H11 str. 11368 chromosome, complete genomeside tail fiber protein7e-0856.2
AP010958:604719:6088486088486117632916Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative side tail fiber protein6e-0856.2
NC_013353:604719:6088486088486117632916Escherichia coli O103:H2 str. 12009, complete genomeside tail fiber protein6e-0856.2
NC_011415:644811:6490376490376520032967Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-0754.3
NC_011745:1055354:1072130107213010736831554Escherichia coli ED1a chromosome, complete genomeputative tail fiber protein from prophage5e-0753.5
NC_011745:2025725:2028912202891220304741563Escherichia coli ED1a chromosome, complete genomeputative tail fiber protein from prophage5e-0753.5
NC_013941:733286:7374277374277402612835Escherichia coli O55:H7 str. CB9615 chromosome, complete genomePPE-repeat protein2e-0651.6
NC_014837:3739408:3760769376076937622681500Pantoea sp. At-9b chromosome, complete genomephage-like tail fiber-like protein2e-0651.2
NC_011740:2737467:2755649275564927574301782Escherichia fergusonii ATCC 35469, complete genomePutative tail fiber protein (fragment)3e-0650.8
NC_009617:1085000:1104627110462711064501824Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein4e-0650.4
NC_006300:60484:772687726878158891Mannheimia succiniciproducens MBEL55E, complete genomehypothetical protein8e-0649.3