Pre_GI: BLASTP Hits

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Query: NC_011004:2507566:2530380 Rhodopseudomonas palustris TIE-1, complete genome

Start: 2530380, End: 2531375, Length: 996

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011004:2457778:248947324894732490465993Rhodopseudomonas palustris TIE-1, complete genomeefflux transporter, RND family, MFP subunit5e-134477
NC_007958:2370619:240183124018312402817987Rhodopseudomonas palustris BisB5, complete genomeSecretion protein HlyD2e-133475
NC_009720:4406991:440825944082594409248990Xanthobacter autotrophicus Py2, complete genomeRND family efflux transporter MFP subunit4e-106384
NC_009485:7626677:763238476323847633331948Bradyrhizobium sp. BTAi1 chromosome, complete genomecobalt-zinc-cadmium resistance efflux pump CzcB4e-105381
NC_009720:670853:689181689181690170990Xanthobacter autotrophicus Py2, complete genomeRND family efflux transporter MFP subunit1e-104379
NC_008345:4107847:410919341091934110119927Shewanella frigidimarina NCIMB 400, complete genomeefflux transporter, RND family, MFP subunit3e-50199
NC_018868:619113:642328642328643269942Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeRND family efflux transporter MFP subunit5e-48191
NC_010943:2465976:248586924858692486819951Stenotrophomonas maltophilia K279a, complete genomeputative cobalt-zinc-cadmium resistance protein3e-41169
NC_007404:1388049:1410356141035614118671512Thiobacillus denitrificans ATCC 25259, complete genomeSecretion protein HlyD2e-40166
NC_016147:1672482:1671260167126016724921233Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative cation efflux system protein7e-40164
NC_013960:1693643:1710722171072217120141293Nitrosococcus halophilus Nc4 chromosome, complete genomeefflux transporter, RND family, MFP subunit7e-39161
NC_018697:1343756:1387224138722413882311008Cycloclasticus sp. P1 chromosome, complete genomeBiotin/lipoyl attachment domain-containing protein1e-38160
NC_008347:2515921:2549944254994425513231380Maricaulis maris MCS10, complete genomeefflux transporter, RND family, MFP subunit2e-37156
NC_015222:523915:5430765430765445751500Nitrosomonas sp. AL212 chromosome, complete genomeefflux transporter, RND family, MFP subunit2e-37156
NC_008752:2724977:2741757274175727430071251Acidovorax avenae subsp. citrulli AAC00-1, complete genomeefflux transporter, RND family, MFP subunit2e-36153
NC_009659:1984980:2002257200225720038371581Janthinobacterium sp. Marseille chromosome, complete genomecobalt-zinc-cadmium resistance protein CzcB2e-36153
NC_015554:1653614:165641616564161657363948Alteromonas sp. SN2 chromosome, complete genomebiotin/lipoyl attachment7e-36151
NC_009438:236424:2468612468612479071047Shewanella putrefaciens CN-32 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein3e-35149
NC_009439:1297851:1324725132472513259901266Pseudomonas mendocina ymp, complete genomeRND family efflux transporter MFP subunit9e-35147
NC_014323:5051041:5069403506940350705931191Herbaspirillum seropedicae SmR1 chromosome, complete genomecobalt-zinc-cadmium resistance cation efflux system transmembrane protein1e-34147
NC_015422:3513689:3535262353526235368631602Alicycliphilus denitrificans K601 chromosome, complete genomeRND family efflux transporter MFP subunit1e-34147
NC_009138:519965:5245815245815261611581Herminiimonas arsenicoxydans, complete genomeCobalt-zinc-cadmium resistance protein czcB (Cation efflux system protein czcB)5e-34145
NC_014910:242845:2499832499832515751593Alicycliphilus denitrificans BC chromosome, complete genomeefflux transporter, rnd family, mfp subunit3e-33142
NC_009138:1583988:1588974158897415905481575Herminiimonas arsenicoxydans, complete genomeCobalt-zinc-cadmium resistance protein czcB (Cation efflux system protein czcB)7e-33141
NC_009434:3611738:3698472369847236997791308Pseudomonas stutzeri A1501, complete genomeCzcB family cobalt/zinc/cadmium efflux transporter membrane fusion protein1e-32140
NC_008782:1917634:1929468192946819310841617Acidovorax sp. JS42, complete genomeefflux transporter, RND family, MFP subunit4e-32139
NC_012968:1594954:1624912162491216264561545Methylotenera mobilis JLW8, complete genomeefflux transporter, RND family, MFP subunit3e-32139
NC_012811:139498:1582481582481596121365Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative CzrB-like protein; cation efflux system protein2e-32139
NC_015740:1291739:1304881130488113061881308Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeCzcB family cobalt/zinc/cadmium efflux transporter membrane fusion protein4e-32138
NC_010002:1879220:1907453190745319088231371Delftia acidovorans SPH-1, complete genomeefflux transporter, RND family, MFP subunit1e-31137
NC_003296:612000:6137526137526149661215Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE COBALT-ZINC-CADMIUM RESISTANCE (CATION EFFLUX SYSTEM PROTEIN) TRANSMEMBRANE9e-31134
NC_018679:278250:2782502782502794311182Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeHelB protein2e-29129
NC_013446:2820000:2834352283435228353681017Comamonas testosteroni CNB-2, complete genomeefflux transporter, RND family, MFP subunit1e-28127
NC_010322:29983:6215762157634071251Pseudomonas putida GB-1 chromosome, complete genomeRND family efflux transporter MFP subunit2e-28127
NC_010501:30000:6609166091673411251Pseudomonas putida W619, complete genomeefflux transporter, RND family, MFP subunit4e-28125
NC_002947:8394:4939949399506491251Pseudomonas putida KT2440, complete genomecobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family4e-28125
NC_009512:27783:6137561375626251251Pseudomonas putida F1, complete genomeefflux transporter, RND family, MFP subunit4e-28125
NC_017986:2548720:2595574259557425968241251Pseudomonas putida ND6 chromosome, complete genomeRND family efflux transporter MFP subunit8e-28124
NC_015733:5909821:5943165594316559444451281Pseudomonas putida S16 chromosome, complete genomeRND family efflux transporter, MFP subunit9e-28124
NC_007520:2305610:2319496231949623207431248Thiomicrospira crunogena XCL-2, complete genomeSecretion protein HlyD1e-26120
NC_011138:318168:3330913330913343291239Alteromonas macleodii 'Deep ecotype', complete genomeSecretion protein HlyD7e-26118
NC_011146:2200142:2241568224156822428541287Geobacter bemidjiensis Bem, complete genomeefflux transporter, RND family, MFP subunit2e-25116
NC_012982:711122:7604227604227617291308Hirschia baltica ATCC 49814, complete genomeefflux transporter, RND family, MFP subunit1e-23110
NC_008607:11663:2314423144245621419Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequenceefflux transporter, RND family, MFP subunit5e-22105
NC_002939:2315402:2353324235332423545801257Geobacter sulfurreducens PCA, complete genomeheavy metal efflux pump, CzcB family4e-22105
NC_002939:2337402:2353324235332423545801257Geobacter sulfurreducens PCA, complete genomeheavy metal efflux pump, CzcB family4e-22105
NC_016024:275845:2758452758452772601416Candidatus Chloracidobacterium thermophilum B chromosome chromosomeRND family efflux transporter MFP subunit3e-21102
NC_010170:4800000:4866928486692848680911164Bordetella petrii, complete genomeCobalt-zinc-cadmium resistance protein czcB3e-2099.4
NC_014759:2438492:2489038248903824908281791Marivirga tractuosa DSM 4126 chromosome, complete genomeefflux transporter, rnd family, mfp subunit4e-1995.5
NC_020126:2299150:2302324230232423036011278Myxococcus stipitatus DSM 14675, complete genomeRND family heavy metal efflux transporter MFP subunit1e-1894.4
NC_008347:2515921:2532218253221825334171200Maricaulis maris MCS10, complete genomeefflux transporter, RND family, MFP subunit1e-1791.3
NC_013222:299683:3102393102393120501812Robiginitalea biformata HTCC2501, complete genomeputative metal transport-related, exported protein1e-1790.9
NC_006368:2684358:269439426943942695362969Legionella pneumophila str. Paris, complete genomeChemiosmotic efflux system C protein B2e-1790.1
NC_002942:1109618:112685611268561127824969Legionella pneumophila subsp. pneumophila str. Philadelphia 1,chemiosmotic efflux system C protein B3e-1789.4
NC_014041:3633842:3640513364051336423151803Zunongwangia profunda SM-A87 chromosome, complete genomeputative metal transport-related, exported protein5e-1789
NC_015496:1288377:1293391129339112951211731Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeefflux transporter, RND family, MFP subunit7e-1788.2
NC_016616:2768053:2788227278822727898161590Dechlorosoma suillum PS chromosome, complete genomeRND family efflux transporter, MFP subunit2e-1687
NC_015638:328601:3338063338063355841779Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeRND family efflux transporter MFP subunit2e-1686.7
NC_016616:1091606:1106100110610011076861587Dechlorosoma suillum PS chromosome, complete genomeRND family efflux transporter, MFP subunit4e-1685.9
NC_011992:2279752:2323781232378123253941614Acidovorax ebreus TPSY, complete genomeefflux transporter, RND family, MFP subunit7e-1685.1
NC_002942:1109618:1113389111338911145221134Legionella pneumophila subsp. pneumophila str. Philadelphia 1,chemiosmotic efflux system B protein B1e-1584.3
NC_006368:2684358:2707689270768927088221134Legionella pneumophila str. Paris, complete genomeChemiosmotic efflux system B protein B1e-1584.3
NC_008571:1374496:1381429138142913832791851Gramella forsetii KT0803, complete genomeHlyD family secretion protein1e-1584
NC_008782:2857899:2870183287018328717991617Acidovorax sp. JS42, complete genomeefflux transporter, RND family, MFP subunit2e-1583.6
NC_010337:1561430:1590063159006315912831221Heliobacterium modesticaldum Ice1, complete genomehlyd family secretion protein4e-1582.4
NC_007484:1694738:1693338169333816947411404Nitrosococcus oceani ATCC 19707, complete genomeSecretion protein HlyD4e-1582.4
NC_007484:1671835:1693338169333816947411404Nitrosococcus oceani ATCC 19707, complete genomeSecretion protein HlyD4e-1582.4
NC_009659:1923925:1959605195960519607951191Janthinobacterium sp. Marseille chromosome, complete genomecobalt-zinc-cadmium resistance protein CzcB6e-1582
NC_018697:1343756:1357546135754613590901545Cycloclasticus sp. P1 chromosome, complete genomeEfflux transporter, RND family, MFP subunit6e-1581.6
NC_020156:737063:7750677750677768001734Nonlabens dokdonensis DSW-6, complete genomeputative cation efflux system transmembrane protein8e-1581.3
NC_020157:36234:3623436234379071674Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequenceefflux transporter, RND family, MFP subunit1e-1480.9
NC_016599:513357:5237075237075254761770Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeRND family efflux transporter, MFP subunit3e-1479.7
NC_015422:2858228:2872027287202728736401614Alicycliphilus denitrificans K601 chromosome, complete genomeRND family efflux transporter MFP subunit3e-1479.7
NC_008782:1510000:1536187153618715378001614Acidovorax sp. JS42, complete genomeefflux transporter, RND family, MFP subunit2e-1479.7
NC_011206:2040000:2064137206413720655851449Acidithiobacillus ferrooxidans ATCC 53993, complete genomeefflux transporter, RND family, MFP subunit1e-1377.8
NC_011386:3723019:3737938373793837394551518Oligotropha carboxidovorans OM5, complete genomesecretion protein HlyD2e-1376.6
NC_014315:1744485:1768637176863717700671431Nitrosococcus watsoni C-113 chromosome, complete genomeRND family efflux transporter MFP subunit3e-1376.3
NC_016609:5890292:5937225593722559383011077Niastella koreensis GR20-10 chromosome, complete genomeRND family efflux transporter MFP subunit8e-1374.7
NC_014836:33278:3448834488359661479Desulfurispirillum indicum S5 chromosome, complete genomeRND family efflux transporter MFP subunit8e-1374.7
NC_017506:93494:1126691126691138531185Marinobacter adhaerens HP15 chromosome, complete genomecation efflux family protein1e-1273.9
NC_006347:4031000:4065301406530140669471647Bacteroides fragilis YCH46, complete genomeputative cation efflux system transmembrane protein2e-1273.6
NC_016776:3973428:4007720400772040093661647Bacteroides fragilis 638R, complete genomeputative metal transport-related, exported protein3e-1273.2
NC_015500:1204501:1204501120450112055441044Treponema brennaborense DSM 12168 chromosome, complete genomeefflux transporter, RND family, MFP subunit4e-1272.8
NC_014394:738365:7547057547057562881584Gallionella capsiferriformans ES-2 chromosome, complete genomeefflux transporter, RND family, MFP subunit4e-1272.8
NC_011758:326366:3528763528763541381263Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeefflux transporter, RND family, MFP subunit7e-1271.6
NC_002939:3043068:3059292305929230604101119Geobacter sulfurreducens PCA, complete genomeefflux transporter, RND family, MFP subunit1e-1170.9
NC_012483:1841000:1867176186717618682971122Acidobacterium capsulatum ATCC 51196, complete genomeefflux transporter, RND family, MFP subunit2e-1169.7
NC_012721:137046:1359461359461370491104Burkholderia glumae BGR1 chromosome 2, complete genomeEfflux transporter, RND family, MFP subunit3e-1169.7
NC_015177:2972701:2992043299204329931131071Pedobacter saltans DSM 12145 chromosome, complete genomeefflux transporter, RND family, MFP subunit5e-1168.6
NC_020156:737063:7817677817677829511185Nonlabens dokdonensis DSW-6, complete genomecation efflux system protein8e-1168.2
NC_011992:3752867:3771307377130737724371131Acidovorax ebreus TPSY, complete genomeefflux transporter, RND family, MFP subunit7e-1168.2
NC_020126:6264651:6266131626613162675341404Myxococcus stipitatus DSM 14675, complete genomecation efflux system protein CusB1e-1067.4
NC_012988:1162838:1166008116600811675251518Methylobacterium extorquens DM4, complete genomesecretion protein , RND family efflux protein3e-1066.2
NC_012968:1594954:1631356163135616329781623Methylotenera mobilis JLW8, complete genomeefflux transporter, RND family, MFP subunit4e-1065.9
NC_020051:31850:4640746407481371731Gloeocapsa sp. PCC 7428 plasmid pGLO7428.02, complete sequenceefflux transporter, RND family, MFP subunit5e-1065.5
NC_007484:1694738:1705899170589917077761878Nitrosococcus oceani ATCC 19707, complete genomeSecretion protein HlyD8e-1065.1
NC_013446:2820000:2856887285688728584071521Comamonas testosteroni CNB-2, complete genomeefflux transporter, RND family, MFP subunit1e-0964.3
NC_009720:5079048:5079048507904850804811434Xanthobacter autotrophicus Py2, complete genomeRND family efflux transporter MFP subunit1e-0964.3
NC_009434:3611738:3640157364015736417941638Pseudomonas stutzeri A1501, complete genomeCzcB family heavy metal RND efflux membrane fusion protein1e-0964.3
NC_012559:2663747:2712935271293527140111077Laribacter hongkongensis HLHK9, complete genomeNolF1e-0964.3
NC_016147:623666:6442566442566455091254Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative HlyD family secretion protein1e-0963.9
NC_013730:906389:9123899123899136061218Spirosoma linguale DSM 74, complete genomeefflux transporter, RND family, MFP subunit2e-0963.5
NC_009439:2427120:2444240244424024457001461Pseudomonas mendocina ymp, complete genomeRND family efflux transporter MFP subunit3e-0963.2
NC_007645:3870466:3893656389365638947501095Hahella chejuensis KCTC 2396, complete genomeMembrane-fusion protein2e-0963.2
NC_009441:3597020:3640520364052036417341215Flavobacterium johnsoniae UW101 chromosome, complete genomeRND family efflux transporter MFP subunit3e-0962.8
NC_012483:1408500:1420552142055214221771626Acidobacterium capsulatum ATCC 51196, complete genomeheavy metal efflux RND transporter, MFP subunit CusB3e-0962.8
NC_015167:3652015:3670956367095636721611206Cellulophaga lytica DSM 7489 chromosome, complete genomeRND family efflux transporter MFP subunit3e-0962.8
NC_018080:3088866:3115260311526031167201461Pseudomonas aeruginosa DK2 chromosome, complete genomeRND family efflux transporter MFP subunit5e-0962.4
NC_014366:588347:5994035994036006111209Gamma proteobacterium HdN1, complete genomeHlyD family secretion protein4e-0962.4
NC_009633:168266:2164082164082176191212Alkaliphilus metalliredigens QYMF chromosome, complete genomeRND family efflux transporter MFP subunit6e-0962
NC_018515:4474000:4482445448244544836501206Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeRND family efflux transporter MFP subunit7e-0961.6
NC_015172:2628128:2634989263498926362031215Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeefflux transporter, RND family, MFP subunit7e-0961.6
NC_011184:2840713:2841298284129828424041107Vibrio fischeri MJ11 chromosome I, complete sequenceperiplasmic component of efflux system9e-0961.2
NC_009092:1874888:1895318189531818963821065Shewanella loihica PV-4, complete genomeefflux transporter, RND family, MFP subunit9e-0961.2
NC_007508:3925445:3943152394315239442221071Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomemembrane fusion protein9e-0961.2
NC_015740:2692023:2695136269513626968001665Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeCzcB family heavy metal RND efflux membrane fusion protein3e-0859.7
NC_015726:2177783:2176242217624221777861545Cupriavidus necator N-1 chromosome 1, complete sequencecobalt-zinc-cadmium resistance membrane-fusion protein CzcA4e-0859.3
NC_014973:4174668:4174668417466841757891122Geobacter sp. M18 chromosome, complete genomeRND family efflux transporter MFP subunit5e-0858.9
NC_014315:1744485:1751756175175617536331878Nitrosococcus watsoni C-113 chromosome, complete genomeRND family efflux transporter MFP subunit7e-0858.2
NC_008255:1701195:1731584173158417328371254Cytophaga hutchinsonii ATCC 33406, complete genomepossible component of copper transport system8e-0858.2
NC_012225:2333500:2339851233985123411101260Brachyspira hyodysenteriae WA1, complete genomemembrane fusion protein1e-0757.8
NC_012982:711122:7377737377737396231851Hirschia baltica ATCC 49814, complete genomeefflux transporter, RND family, MFP subunit2e-0757
NC_013222:299683:3610893610893622911203Robiginitalea biformata HTCC2501, complete genomecation efflux system protein3e-0756.2
NC_011060:459615:4765624765624776441083Pelodictyon phaeoclathratiforme BU-1, complete genomeefflux transporter, RND family, MFP subunit3e-0756.2
NC_010814:155834:1589291589291600681140Geobacter lovleyi SZ, complete genomeefflux transporter, RND family, MFP subunit4e-0755.8
NC_015732:773143:801034801034801951918Spirochaeta caldaria DSM 7334 chromosome, complete genomeefflux transporter, RND family, MFP subunit6e-0755.5
NC_017030:8551795:8557187855718785583651179Corallococcus coralloides DSM 2259 chromosome, complete genomeRND family efflux transporter MFP subunit6e-0755.1
NC_018870:2316499:2381159238115923823581200Thermacetogenium phaeum DSM 12270 chromosome, complete genomeRND-like efflux transporter9e-0754.7
NC_015424:3277292:3297730329773032987791050Aeromonas veronii B565 chromosome, complete genomeHlyD family secretion protein1e-0654.3
NC_013520:1860286:1878059187805918791741116Veillonella parvula DSM 2008, complete genomeefflux transporter, RND family, MFP subunit1e-0654.3
NC_008255:1701195:1730348173034817315621215Cytophaga hutchinsonii ATCC 33406, complete genomepossible component of copper transport system1e-0654.3
NC_016641:3772981:3772981377298137743811401Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-0653.9
NC_017506:93494:1215631215631228101248Marinobacter adhaerens HP15 chromosome, complete genomeRND family efflux transporter MFP subunit2e-0653.5
NC_007520:1940120:1943293194329319445761284Thiomicrospira crunogena XCL-2, complete genomeSecretion protein HlyD2e-0653.5
NC_015065:162317:1921921921921934991308Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceefflux transporter, RND family, MFP subunit2e-0653.5
NC_021172:169215:172383172383173375993Hyphomicrobium denitrificans 1NES1, complete genomeRND family efflux transporter MFP subunit3e-0653.1
NC_010524:2117347:2136794213679421380501257Leptothrix cholodnii SP-6, complete genomeefflux transporter, RND family, MFP subunit3e-0653.1
NC_009633:365325:3984453984453996051161Alkaliphilus metalliredigens QYMF chromosome, complete genomeRND family efflux transporter MFP subunit3e-0653.1
NC_015499:1167932:1167932116793211690381107Thermodesulfobium narugense DSM 14796 chromosome, complete genomeefflux transporter, RND family, MFP subunit3e-0652.8
NC_014364:1899983:1899983189998319013351353Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeefflux transporter, RND family, MFP subunit4e-0652.8
NC_019757:5852000:5852005585200558533601356Cylindrospermum stagnale PCC 7417, complete genomeRND family efflux transporter, MFP subunit4e-0652.8
NC_012881:1062629:1070125107012510711651041Desulfovibrio salexigens DSM 2638, complete genomeefflux transporter, RND family, MFP subunit4e-0652.8
NC_016148:463840:4627944627944638431050Thermovirga lienii DSM 17291 chromosome, complete genomeRND family efflux transporter MFP subunit4e-0652.8
NC_013960:1693643:1702867170286717043931527Nitrosococcus halophilus Nc4 chromosome, complete genomeefflux transporter, RND family, MFP subunit9e-0651.6