Pre_GI: BLASTP Hits

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Query: NC_010514:6000:26452 Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, complete

Start: 26452, End: 26778, Length: 327

Host Lineage: Methylobacterium radiotolerans; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This methylotrophic species nodulates and fixes nitrogen in symbiosis with legumes. Methylobacterium represents a branch of the Rhizobia which grow facultatively on methanol.




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Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:32996:557525575256060309Methylobacterium extorquens DM4, complete genomeintegration host factor4e-2096.7
NC_011757:97281:115544115544115852309Methylobacterium chloromethanicum CM4, complete genomeintegration host factor, beta subunit4e-2096.7
NC_008095:4061899:408187440818744082257384Myxococcus xanthus DK 1622, complete genomeintegration host factor, beta subunit2e-1787.8
NC_010511:1122529:112672511267251127033309Methylobacterium sp. 4-46 chromosome, complete genomehistone family protein DNA-binding protein2e-1684.3
NC_008781:2925818:294360729436072943921315Polaromonas naphthalenivorans CJ2, complete genomeintegration host factor, beta subunit3e-1683.6
NC_014394:2111985:211605621160562116349294Gallionella capsiferriformans ES-2 chromosome, complete genomeintegration host factor, beta subunit4e-1683.6
NC_014394:1594071:161351816135181613811294Gallionella capsiferriformans ES-2 chromosome, complete genomeintegration host factor, beta subunit6e-1682.8
NC_002939:2844240:286990028699002870190291Geobacter sulfurreducens PCA, complete genomeDNA-binding protein HU1e-1582
NC_008702:1153344:115712611571261157410285Azoarcus sp. BH72, complete genomeprobable integration host factor, beta-subunit9e-1682
NC_020126:5777895:577995457799545780325372Myxococcus stipitatus DSM 14675, complete genomeintegration host factor subunit beta2e-1581.3
NC_018868:569423:571431571431571727297Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeintegration host factor subunit beta8e-1579
NC_019907:1411124:141570214157021416001300Liberibacter crescens BT-1 chromosome, complete genomeintegration host factor subunit beta8e-1579
NC_010511:3674178:373084737308473731155309Methylobacterium sp. 4-46 chromosome, complete genomehistone family protein DNA-binding protein9e-1579
NC_012997:1446037:144955514495551449851297Teredinibacter turnerae T7901, complete genomeintegration host factor, beta subunit1e-1478.6
NC_013939:1417750:143906514390651439358294Deferribacter desulfuricans SSM1, complete genomeintegration host factor, subunit beta1e-1478.6
NC_021150:1564229:156422915642291564507279Azotobacter vinelandii CA6, complete genomeintegration host factor subunit beta2e-1478.2
NC_012918:1174412:117713711771371177418282Geobacter sp. M21 chromosome, complete genomehistone family protein DNA-binding protein3e-1477
NC_011146:3720658:374570537457053745986282Geobacter bemidjiensis Bem, complete genomehistone family protein DNA-binding protein3e-1477
NC_011770:2046490:205485620548562055140285Pseudomonas aeruginosa LESB58, complete genomeintegration host factor beta subunit5e-1476.3
NC_008463:2017607:202597320259732026257285Pseudomonas aeruginosa UCBPP-PA14, complete genomeintegration host factor beta subunit5e-1476.3
NC_009656:1994392:200277320027732003057285Pseudomonas aeruginosa PA7 chromosome, complete genomeintegration host factor subunit beta5e-1476.3
NC_018080:1834754:184312018431201843404285Pseudomonas aeruginosa DK2 chromosome, complete genomeintegration host factor subunit beta5e-1476.3
NC_009439:2038303:204573520457352046022288Pseudomonas mendocina ymp, complete genomeintegration host factor subunit beta8e-1475.9
NC_015410:2144387:215171921517192152003285Pseudomonas mendocina NK-01 chromosome, complete genomeintegration host factor subunit beta9e-1475.5
NC_008027:1559083:156937315693731569669297Pseudomonas entomophila L48, complete genomeintegration host factor (IHF),beta subunit, site specific recombination2e-1374.7
NC_016631:5378810:539409553940955394448354Granulicella mallensis MP5ACTX8 chromosome, complete genomehistone family protein DNA-binding protein2e-1374.7
NC_012660:1804610:181322818132281813524297Pseudomonas fluorescens SBW25 chromosome, complete genomeintegration host factor subunit beta2e-1374.7
NC_020209:997385:100490410049041005200297Pseudomonas poae RE*1-1-14, complete genomeintegration host factor subunit beta1e-1374.7
NC_007492:4563981:458471745847174585013297Pseudomonas fluorescens PfO-1, complete genomeIntegration host factor, beta subunit1e-1374.7
NC_015379:1887275:189486818948681895164297Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, unclassified1e-1374.7
NC_016830:1901488:190914419091441909440297Pseudomonas fluorescens F113 chromosome, complete genomeprotein IhfB1e-1374.7
NC_010322:1520973:152683615268361527132297Pseudomonas putida GB-1 chromosome, complete genomeintegration host factor subunit beta2e-1374.3
NC_015733:1555476:156068915606891560988300Pseudomonas putida S16 chromosome, complete genomeintegration host factor subunit beta2e-1374.3
NC_016632:1138000:115011011501101150394285Serratia symbiotica str. 'Cinara cedri' chromosome, completeintegration host factor beta-subunit5e-1372.8
NC_013862:27991:106151061510902288Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequenceintegration host factor, beta subunit9e-1372.4
NC_011979:3045952:305677330567733057048276Geobacter sp. FRC-32, complete genomehistone family protein DNA-binding protein9e-1372.4
NC_011894:3029964:304430630443063044647342Methylobacterium nodulans ORS 2060, complete genomehistone family protein DNA-binding protein2e-1271.2
NC_009483:2489000:250032325003232500598276Geobacter uraniireducens Rf4 chromosome, complete genomehistone family protein DNA-binding protein7e-1269.3
NC_008609:1976403:204043820404382040710273Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein1e-1168.6
NC_007298:1759881:178333917833391783623285Dechloromonas aromatica RCB, complete genomeHistone-like bacterial DNA-binding protein1e-1168.2
NC_014483:39729:512505125051522273Paenibacillus polymyxa E681 chromosome, complete genomeDNA-binding protein HU (DNA-binding protein II)6e-1166.2
NC_016641:1639356:164996216499621650234273Paenibacillus terrae HPL-003 chromosome, complete genomeDNA-binding protein hu-alpha6e-1166.2
NC_009922:2850320:286144528614452861723279Alkaliphilus oremlandii OhILAs, complete genomehistone family protein DNA-binding protein8e-1165.9
NC_015499:119200:137696137696138016321Thermodesulfobium narugense DSM 14796 chromosome, complete genomehistone family protein DNA-binding protein1e-1065.5
NC_009633:168266:184646184646184924279Alkaliphilus metalliredigens QYMF chromosome, complete genomehistone family protein DNA-binding protein1e-1065.5
NC_016148:1175999:117808711780871178362276Thermovirga lienii DSM 17291 chromosome, complete genomehistone family protein DNA-binding protein2e-1064.7
NC_000964:2146000:222453322245332224811279Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-1063.9
NC_020126:8080574:808535780853578085707351Myxococcus stipitatus DSM 14675, complete genomeintegration host factor subunit beta4e-1063.5
NC_015942:355944:374241374241374750510Acidithiobacillus ferrivorans SS3 chromosome, complete genomehistone family protein DNA-binding protein7e-1062.8
NC_020409:560278:568779568779569054276Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegration host factor subunit beta6e-1062.8
NC_014152:191200:195060195060195332273Thermincola sp. JR, complete genomehistone family protein DNA-binding protein6e-1062.8
NC_016629:2971860:298610929861092986384276Desulfovibrio africanus str. Walvis Bay chromosome, completehistone family protein DNA-binding protein1e-0962
NC_006138:1571878:158721715872171587528312Desulfotalea psychrophila LSv54, complete genomesimilar to integration host factor, alpha subunit3e-0960.8
NC_010723:173280:174948174948175226279Clostridium botulinum E3 str. Alaska E43, complete genomeDNA-binding protein HU3e-0960.8
NC_014972:3604534:361615136161513616432282Desulfobulbus propionicus DSM 2032 chromosome, complete genomehistone family protein DNA-binding protein3e-0960.5
NC_008262:2649289:270117027011702701445276Clostridium perfringens SM101, complete genomeDNA-binding protein HU4e-0960.1
NC_009698:3647955:365023136502313650509279Clostridium botulinum A str. Hall chromosome, complete genomeDNA-binding protein HU6e-0959.3
NC_010516:3845942:384813938481393848417279Clostridium botulinum B1 str. Okra, complete genomeDNA-binding protein HU6e-0959.3
NC_014614:356746:394283394283394591309Clostridium sticklandii, complete genomeHU, DNA-binding transcriptional regulator, beta subunit6e-0959.3
NC_015589:2555000:256458325645832564867285Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehistone family protein DNA-binding protein6e-0959.3
NC_018643:1080514:108223910822391082529291Alpha proteobacterium HIMB5 chromosome, complete genomeDNA-binding protein7e-0959.3
NC_007930:50801:564885648856763276Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,DNA-binding protein HU1e-0858.9
NC_003909:3483244:350545735054573505729273Bacillus cereus ATCC 10987, complete genomeDNA-binding protein HU1e-0858.9
NC_011773:3547507:356972435697243569996273Bacillus cereus AH820 chromosome, complete genomeDNA-binding protein HU1e-0858.9
NC_014972:1621850:162878916287891629079291Desulfobulbus propionicus DSM 2032 chromosome, complete genomehistone family protein DNA-binding protein1e-0858.5
NC_009437:1556934:156381915638191564106288Caldicellulosiruptor saccharolyticus DSM 8903, complete genomehistone family protein DNA-binding protein1e-0858.5
NC_018145:1089548:110930811093081109583276Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completehistone family protein DNA-binding protein1e-0858.2
NC_011898:2907017:292558029255802925855276Clostridium cellulolyticum H10, complete genomehistone family protein DNA-binding protein2e-0858.2
NC_020209:4643901:465937146593714659646276Pseudomonas poae RE*1-1-14, complete genomenucleoid protein HU subunit alpha2e-0857.8
NC_014623:4999032:500264050026405003044405Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeintegration host factor subunit alpha4e-0857
NC_008095:4189082:419269841926984193087390Myxococcus xanthus DK 1622, complete genomeintegration host factor, alpha subunit3e-0857
NC_020291:117983:126830126830127105276Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeDNA-binding protein HU4e-0856.6
NC_010793:30488:319203192032228309Orientia tsutsugamushi str. Ikeda, complete genomeDNA-binding protein HU6e-0856.2
NC_002932:296557:307146307146307451306Chlorobium tepidum TLS, complete genomeDNA-binding protein HU-alpha, putative6e-0856.2
NC_002937:1915787:193133319313331931614282Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeDNA-binding protein HU, beta subunit, putative7e-0855.8
NC_008609:1976403:204347420434742043854381Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein8e-0855.8
NC_002488:1099975:114255611425561142840285Xylella fastidiosa 9a5c, complete genomehistone-like protein1e-0755.5
NC_016510:4343:102691026910577309Flavobacterium columnare ATCC 49512 chromosome, complete genomehistone-like DNA-binding protein HU-alpha9e-0855.5
NC_011725:1486635:149603414960341496306273Bacillus cereus B4264 chromosome, complete genomeDNA-binding protein HU1e-0755.1
NC_004603:3080614:310021231002123100487276Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeDNA-binding protein HU-22e-0754.7
NC_009332:653474:654160654160654435276Streptococcus pyogenes str. Manfredo chromosome, complete genomeDNA-binding protein HU2e-0754.3
NC_002737:1207880:122263712226371222912276Streptococcus pyogenes M1 GAS, complete genomehistone-like DNA-binding protein2e-0754.3
NC_008609:142471:182937182937183212276Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein2e-0754.3
NC_007298:1759881:177516617751661775387222Dechloromonas aromatica RCB, complete genomeHistone-like bacterial DNA-binding protein3e-0753.9
NC_012751:1296877:129890012989001299259360Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeDNA-binding protein HU-alpha (HU-2)4e-0753.5
NC_010125:2884762:288998828899882890281294Gluconacetobacter diazotrophicus PAl 5, complete genomeputative DNA binding protein5e-0753.1
NC_014532:3596097:360212336021233602398276Halomonas elongata DSM 2581, complete genomeK03530 DNA-binding protein HU-beta5e-0753.1
NC_007626:2354260:236467623646762364954279Magnetospirillum magneticum AMB-1, complete genomeBacterial nucleoid DNA-binding protein7e-0752.8
NC_013799:927300:928586928586928888303Hydrogenobacter thermophilus TK-6, complete genomeintegration host factor alpha subunit6e-0752.8
NC_017161:927290:928576928576928878303Hydrogenobacter thermophilus TK-6 chromosome, complete genomehistone family protein DNA-binding protein6e-0752.8
NC_016629:3396500:342726034272603427532273Desulfovibrio africanus str. Walvis Bay chromosome, completehistone family protein DNA-binding protein6e-0752.8
NC_007519:3326918:333138833313883331675288Desulfovibrio alaskensis G20 chromosome, complete genomehistone-like DNA-binding protein6e-0752.8
NC_007517:1792000:180801818080181808308291Geobacter metallireducens GS-15, complete genomeHistone-like DNA-binding protein8e-0752.4
NC_019745:3066177:308302630830263083310285Gloeocapsa sp. PCC 7428, complete genomehistone family protein DNA-binding protein8e-0752.4
NC_007626:959684:993045993045993323279Magnetospirillum magneticum AMB-1, complete genomeBacterial nucleoid DNA-binding protein1e-0652
NC_004129:4596040:460138246013824601654273Pseudomonas fluorescens Pf-5, complete genomeDNA-binding protein HU, beta subunit1e-0652
NC_014652:379833:398080398080398358279Caldicellulosiruptor hydrothermalis 108 chromosome, completehistone family protein DNA-binding protein1e-0652
NC_009257:1023696:104281710428171043089273Francisella tularensis subsp. tularensis WY96-3418 chromosome,DNA-binding protein HU-beta1e-0652
NC_007484:1975322:199732119973211997593273Nitrosococcus oceani ATCC 19707, complete genomeHistone-like DNA-binding protein1e-0652
NC_012034:2623252:263621926362192636497279Anaerocellum thermophilum DSM 6725, complete genomehistone family protein DNA-binding protein1e-0652
NC_007645:2204066:221540322154032215675273Hahella chejuensis KCTC 2396, complete genomeBacterial nucleoid DNA-binding protein1e-0651.6
NC_011894:5056901:506686150668615067178318Methylobacterium nodulans ORS 2060, complete genomehistone family protein DNA-binding protein2e-0651.2
NC_014972:2503107:251001825100182510305288Desulfobulbus propionicus DSM 2032 chromosome, complete genomehistone family protein DNA-binding protein2e-0651.2
NC_015383:368500:376195376195376473279Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequencehistone family protein DNA-binding protein2e-0651.2
NC_004463:5540924:556590355659035566262360Bradyrhizobium japonicum USDA 110, complete genomeintegration host factor alpha subunit3e-0650.8
NC_002950:1334500:133467413346741334952279Porphyromonas gingivalis W83, complete genomeDNA-binding protein HU3e-0650.8
NC_015571:1265121:126695712669571267235279Porphyromonas gingivalis TDC60, complete genomeDNA-binding protein HU3e-0650.8
NC_007626:1038214:104975510497551050087333Magnetospirillum magneticum AMB-1, complete genomeBacterial nucleoid DNA-binding protein3e-0650.4
NC_007925:2892371:290671829067182907044327Rhodopseudomonas palustris BisB18, complete genomeintegration host factor, alpha subunit4e-0650.4
NC_012438:50845:681496814968424276Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeDNA-binding protein HU 1 (DNA-binding protein II) (HB)5e-0649.7
NC_010815:40357:411964119641477282Geobacter lovleyi SZ plasmid pGLOV01, complete sequencehistone family protein DNA-binding protein7e-0649.3