Pre_GI Gene

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Host: NC_010793 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010793:30488 Orientia tsutsugamushi str. Ikeda, complete genome

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29283304911209polyA polymeraseQuickGO ontologyBLASTP
3048831384897zincmanganese ABC transporter substrate binding proteinQuickGO ontologyBLASTP
314933156977tRNA-HisQuickGO ontology
3192032228309DNA-binding protein HUQuickGO ontologyBLASTP
3241133286876hypothetical protein
3341534236822dimethyladenosine transferaseQuickGO ontologyBLASTP
34297356461350DNA recombination protein RmuC homologQuickGO ontologyBLASTP
35756368171062putative membrane-associated Zn-dependent protease 1QuickGO ontologyBLASTP
36830391482319outer membrane protein Omp1QuickGO ontologyBLASTP
3917139497327thioredoxinQuickGO ontologyBLASTP
407304085512650S ribosomal protein L36QuickGO ontology
4191942104186transposaseQuickGO ontologyBLASTP
4228242635354transposaseQuickGO ontologyBLASTP
4356343829267putative conjugative transfer protein TraDQuickGO ontologyBLASTP
4440244929528ankyrin repeat-containing protein 01_01QuickGO ontologyBLASTP
4473345455723putative conjugative transfer protein TraCQuickGO ontologyBLASTP
4570345885183hypothetical proteinBLASTP
4609746414318putative conjugative transfer protein TraEQuickGO ontologyBLASTP
4641446737324hypothetical proteinBLASTP
4687547690816putative integraseQuickGO ontologyBLASTP
49073503921320hypothetical proteinBLASTP