Pre_GI: BLASTP Hits

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Query: NC_010501:5442000:5459657 Pseudomonas putida W619, complete genome

Start: 5459657, End: 5460763, Length: 1107

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:176885:1811051811051822111107Pseudomonas syringae pv. phaseolicola 1448A, complete genomepeptidyl-arginine deiminase-like protein2e-176618
NC_020209:5077410:5078827507882750799331107Pseudomonas poae RE*1-1-14, complete genomeagmatine deiminase7e-175613
NC_012560:4929683:4949681494968149507991119Azotobacter vinelandii DJ, complete genomePorphyromonas-type peptidyl-arginine deiminase6e-157553
NC_021150:4929670:4949668494966849507861119Azotobacter vinelandii CA6, complete genomeagmatine deiminase6e-157553
NC_013421:163114:1811791811791822821104Pectobacterium wasabiae WPP163, complete genomeagmatine deiminase2e-110399
NC_010465:933488:9569479569479580621116Yersinia pseudotuberculosis YPIII, complete genomeagmatine deiminase2e-106386
NC_008150:361224:3867033867033878181116Yersinia pestis Antiqua, complete genomehypothetical protein2e-106386
NC_005810:3964468:3989148398914839902631116Yersinia pestis biovar Microtus str. 91001, complete genomeagmatine deiminase2e-106386
NC_009381:627685:6510416510416521561116Yersinia pestis Pestoides F chromosome, complete genomeagmatine deiminase2e-106386
NC_014029:1001000:1024418102441810255331116Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-106386
NC_017154:941065:9665639665639676781116Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-106386
NC_017160:945176:9685389685389696531116Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-106386
NC_017168:50391:7383573835749501116Yersinia pestis A1122 chromosome, complete genomeagmatine deiminase2e-106386
NC_017265:854492:8778498778498789641116Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Agmatine deiminase2e-106386
NC_014500:177824:1980611980611991641104Dickeya dadantii 3937 chromosome, complete genomeAgmatine deiminase5e-105381
NC_020291:2701149:2715735271573527168381104Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative agmatine deiminase AguA4e-68258
NC_014829:4565467:4579521457952145805401020Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeAgmatine deiminase3e-65249
NC_011831:853433:8736428736428746851044Chloroflexus aggregans DSM 9485, complete genomeAgmatine deiminase2e-53209
NC_007796:31691:5110051100529951896Methanospirillum hungatei JF-1, complete genomePorphyromonas-type peptidyl-arginine deiminase5e-49195
NC_009664:1434974:1456236145623614572551020Kineococcus radiotolerans SRS30216, complete genomeAgmatine deiminase1e-48194
NC_015563:4093650:4114102411410241152591158Delftia sp. Cs1-4 chromosome, complete genomeAgmatine deiminase2e-48192
NC_014640:76992:99056990561001801125Achromobacter xylosoxidans A8 chromosome, complete genomeagmatine deiminase4e-46185
NC_019940:203718:2057962057962068541059Thioflavicoccus mobilis 8321 chromosome, complete genomepeptidylarginine deiminase-like protein1e-44181
NC_014033:1691822:1694938169493816959541017Prevotella ruminicola 23 chromosome, complete genomepeptidyl-arginine deiminase family protein9e-41167
NC_009667:1076718:1095345109534510964511107Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceagmatine deiminase1e-40167
NC_015311:1827000:1827413182741318284711059Prevotella denticola F0289 chromosome, complete genomehypothetical protein1e-40167
NC_010572:1293786:1296025129602512971791155Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative peptidyl-arginine deiminase family protein3e-38159
NC_007645:2408125:2409027240902724100611035Hahella chejuensis KCTC 2396, complete genomePeptidylarginine deiminase and related enzyme1e-36154
NC_010729:265791:2766502766502776751026Porphyromonas gingivalis ATCC 33277, complete genomeputative arginine deiminase2e-36153
NC_002950:155873:1667331667331677581026Porphyromonas gingivalis W83, complete genomehypothetical protein4e-36152
NC_017080:166180:1675521675521685621011Phycisphaera mikurensis NBRC 102666, complete genomeagmatine deiminase7e-36151
NC_013161:1023716:1038146103814610391831038Cyanothece sp. PCC 8802, complete genomeAgmatine deiminase9e-36151
NC_011726:1023690:1038120103812010391571038Cyanothece sp. PCC 8801, complete genomeAgmatine deiminase9e-36151
NC_010814:2758902:2783326278332627843481023Geobacter lovleyi SZ, complete genomeAgmatine deiminase1e-34147
NC_018721:3155579:3160575316057531618011227Psychroflexus torquis ATCC 700755 chromosome, complete genomepeptidyl-arginine deiminase, Porphyromonas-type4e-34145
NC_009615:1354122:1370301137030113713291029Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein7e-34144
NC_015571:440605:451464451464452402939Porphyromonas gingivalis TDC60, complete genomeputative arginine deiminase6e-30131
NC_015738:220000:2308602308602320921233Eggerthella sp. YY7918, complete genomepeptidylarginine deiminase9e-24111
NC_009727:766000:7850677850677861041038Coxiella burnetii Dugway 7E9-12, complete genome7e-21101