Pre_GI: BLASTP Hits

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Query: NC_010501:3013103:3015101 Pseudomonas putida W619, complete genome

Start: 3015101, End: 3015376, Length: 276

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015276:2769000:277422527742252774503279Marinomonas mediterranea MMB-1 chromosome, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase2e-24110
NC_020829:2022000:202221020222102022491282Pseudomonas denitrificans ATCC 13867, complete genomepeptidyl-prolyl cis-trans isomerase C24e-22103
NC_009654:2940278:294357329435732943851279Marinomonas sp. MWYL1, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase5e-22103
NC_009092:2902171:290551829055182905796279Shewanella loihica PV-4, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase3e-2097.1
NC_009524:1488714:149441914944191494697279Psychrobacter sp. PRwf-1 chromosome, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase1e-1995.1
NC_004129:4093610:411516241151624115443282Pseudomonas fluorescens Pf-5, complete genomepeptidyl-prolyl cis-trans isomerase C1e-1994.7
NC_002937:1548081:155130715513071551591285Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completepeptidyl-prolyl cis-trans isomerase C1e-1891.7
NC_010634:166900:187673187673187969297Yersinia pseudotuberculosis PB1/+, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase1e-1788.6
NC_006155:172313:193079193079193360282Yersinia pseudotuberculosis IP 32953, complete genomepeptidyl-prolyl cis-trans isomerase1e-1788.2
NC_016628:763833:789442789442789720279Vibrio furnissii NCTC 11218 chromosome 2, complete sequencepeptidyl-prolyl cis-trans isomerase C2e-1684.3
NC_014393:187454:192762192762193505744Clostridium cellulovorans 743B chromosome, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase3e-1684
NC_015687:303810:319048319048319791744Clostridium acetobutylicum DSM 1731 chromosome, complete genomepeptidil-prolyl cis-trans isomerase4e-1580.1
NC_003030:303812:319051319051319794744Clostridium acetobutylicum ATCC 824, complete genomePeptidil-prolyl cis-trans isomerase4e-1580.1
NC_014328:85290:115121115121115864744Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative foldase-like protein1e-1478.6
NC_008262:297960:311887311887312633747Clostridium perfringens SM101, complete genomePPIC-type PPIASE domain protein6e-1476.3
NC_015425:2690448:270301927030192703762744Clostridium botulinum BKT015925 chromosome, complete genomepeptidil-prolyl cis-trans isomerase7e-1475.9
NC_008593:2457594:247010024701002470843744Clostridium novyi NT, complete genomepeptidil-prolyl cis-trans isomerase2e-1374.7
NC_021182:162236:167498167498168244747Clostridium pasteurianum BC1, complete genomeparvulin-like peptidyl-prolyl isomerase4e-1373.2
NC_011837:3776541:378048837804883781264777Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-1372.8
NC_009706:3845039:384901938490193849762744Clostridium kluyveri DSM 555 chromosome, complete genomefoldase-like protein6e-1372.8
NC_012658:35500:691566915669899744Clostridium botulinum Ba4 str. 657 chromosome, complete genomepeptidil-prolyl isomerase family protein3e-1270.5
NC_010516:42475:750317503175774744Clostridium botulinum B1 str. Okra, complete genomepeptidil-prolyl isomerase family protein3e-1270.5
NC_012563:36000:693126931270055744Clostridium botulinum A2 str. Kyoto, complete genomepeptidil-prolyl isomerase family protein3e-1270.5
NC_009495:38000:752547525475997744Clostridium botulinum A str. ATCC 3502 chromosome, complete genomepeptidil-prolyl isomerase3e-1270.5
NC_009697:38000:680576805768800744Clostridium botulinum A str. ATCC 19397 chromosome, completepeptidil-prolyl isomerase family protein3e-1270.5
NC_009698:38000:680586805868801744Clostridium botulinum A str. Hall chromosome, complete genomepeptidil-prolyl isomerase3e-1270.5
NC_009699:33452:700837008370826744Clostridium botulinum F str. Langeland chromosome, complete genomepeptidil-prolyl isomerase family protein3e-1270.5
NC_017297:33519:702857028571028744Clostridium botulinum F str. 230613 chromosome, complete genomepeptidil-prolyl isomerase family protein3e-1270.5
NC_011899:2286884:229515822951582296156999Halothermothrix orenii H 168, complete genomepeptidil-prolyl cis-trans isomerase8e-1268.9
NC_003366:332500:345779345779346525747Clostridium perfringens str. 13, complete genomehypothetical protein3e-1167
NC_008261:304000:317140317140317886747Clostridium perfringens ATCC 13124, complete genomepeptidyl-prolyl cis-trans isomerase family protein3e-1167
NC_010520:35845:690946909469837744Clostridium botulinum A3 str. Loch Maree, complete genomepeptidil-prolyl isomerase family protein4e-1167
NC_010184:1017000:103395610339561034825870Bacillus weihenstephanensis KBAB4, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase1e-1065.1
NC_017200:1157835:117904211790421179908867Bacillus thuringiensis serovar finitimus YBT-020 chromosome,peptidyl-prolyl isomerase2e-1064.7
NC_011772:1011220:102643810264381027307870Bacillus cereus G9842, complete genomepeptidylprolyl isomerase PrsA13e-1063.9
NC_011969:1084000:110399811039981104858861Bacillus cereus Q1 chromosome, complete genomepeptidyl-prolyl isomerase3e-1063.5
NC_003909:1139556:115918111591811160044864Bacillus cereus ATCC 10987, complete genomepeptidylprolyl isomerase3e-1063.5
NC_015519:488550:504853504853505755903Tepidanaerobacter sp. Re1 chromosome, complete genomeFoldase protein prsA8e-1062.4
NC_002947:2589951:2633536263353626354071872Pseudomonas putida KT2440, complete genomepeptidyl-prolyl cis-trans isomerase D, putative9e-1062.4
NC_011725:1032500:105122210512221052082861Bacillus cereus B4264 chromosome, complete genomepeptidyl-prolyl isomerase1e-0962
NC_004722:1008500:102487310248731025733861Bacillus cereus ATCC 14579, complete genomepeptidylprolyl isomerase1e-0962
NC_009633:168266:179607179607180566960Alkaliphilus metalliredigens QYMF chromosome, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase1e-0961.6
NC_016627:3659500:365971136597113660460750Clostridium clariflavum DSM 19732 chromosome, complete genomeparvulin-like peptidyl-prolyl isomerase2e-0961.2
NC_011146:2916223:2919097291909729201521056Geobacter bemidjiensis Bem, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase4e-0960.1
NC_002516:4321000:433440343344034335221819Pseudomonas aeruginosa PAO1, complete genomeprobable peptidyl-prolyl cis-trans isomerase, PpiC-type5e-0959.7
NC_008463:1188951:119043211904321191250819Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative peptidyl-prolyl cis-trans isomerase1e-0858.5
NC_012560:2348202:2365188236518823670621875Azotobacter vinelandii DJ, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase2e-0857.8
NC_021150:2348214:2365200236520023670741875Azotobacter vinelandii CA6, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase2e-0857.8
NC_014532:2146466:216159921615992162411813Halomonas elongata DSM 2581, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase2e-0857.8
NC_009483:2993818:301795230179523018932981Geobacter uraniireducens Rf4 chromosome, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase3e-0857.4
NC_009922:2850320:286539528653952866348954Alkaliphilus oremlandii OhILAs, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase1e-0755.5
NC_004129:4596040:4599284459928446011551872Pseudomonas fluorescens Pf-5, complete genomepeptidyl-prolyl cis-trans isomerase D1e-0755.1
NC_014315:1463383:1463383146338314653051923Nitrosococcus watsoni C-113 chromosome, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase5e-0753.1
NC_015731:2148517:2167044216704421683661323Nitrosomonas sp. Is79A3 chromosome, complete genomeChaperone surA6e-0752.8
NC_007645:2204066:2215875221587522177611887Hahella chejuensis KCTC 2396, complete genomeParvulin-like peptidyl-prolyl isomerase8e-0752.4
NC_014654:1:2808328083291051023Halanaerobium sp. 'sapolanicus' chromosome, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase1e-0651.6
NC_014560:171931:178636178636179535900Helicobacter pylori SJM180 chromosome, complete genomeputative peptidyl-prolyl cis-trans isomerase2e-0651.6
NC_011725:1182000:118423111842311185088858Bacillus cereus B4264 chromosome, complete genomepeptidyl-prolyl isomerase3e-0650.8
NC_010002:1447711:145814514581451459080936Delftia acidovorans SPH-1, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase3e-0650.8
NC_008752:4589119:460003446000344600933900Acidovorax avenae subsp. citrulli AAC00-1, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase4e-0650.4
NC_011059:1:1622716227175461320Prosthecochloris aestuarii DSM 271, complete genomeSurA domain4e-0650.1
NC_016599:144844:1563711563711583381968Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeparvulin-like peptidyl-prolyl isomerase4e-0650.1
NC_013166:1409790:142975314297531430571819Kangiella koreensis DSM 16069, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase5e-0649.7
NC_009675:2623339:265397026539702654836867Anaeromyxobacter sp. Fw109-5 chromosome, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase6e-0649.7
NC_014972:3000138:3015278301527830171581881Desulfobulbus propionicus DSM 2032 chromosome, complete genomePpiC-type peptidyl-prolyl cis-trans isomerase6e-0649.3
NC_015138:4584846:459276245927624593661900Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completePpiC-type peptidyl-prolyl cis-trans isomerase1e-0548.9