Pre_GI: BLASTP Hits

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Query: NC_009800:1254409:1268050 Escherichia coli HS, complete genome

Start: 1268050, End: 1269570, Length: 1521

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010468:2699000:2704151270415127067712621Escherichia coli ATCC 8739, complete genome0967
NC_000913:1188999:1218824121882412214452622Escherichia coli K12, complete genome0967
NC_010473:1245284:1259065125906512616862622Escherichia coli str. K-12 substr. DH10B, complete genome0967
NC_011751:1446073:146587014658701466853984Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-131468
NC_011740:1831845:1835772183577218385102739Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; putative exported protein4e-96352
NC_011751:1446073:1466883146688314685321650Escherichia coli UMN026 chromosome, complete genomehypothetical protein4e-90332
NC_011750:1978801:1980462198046219831102649Escherichia coli IAI39 chromosome, complete genomeputative outer membrane autotransporter barrel, putative pectin lyase fold4e-82305
NC_010658:1193225:120818312081831208812630Shigella boydii CDC 3083-94, complete genome7e-80298
NC_010498:1995500:1999462199946220017832322Escherichia coli SMS-3-5, complete genomeautotransporter (AT) family porin4e-66252
NC_011415:1273551:1287653128765312899742322Escherichia coli SE11 chromosome, complete genomeputative autotransporter7e-61235
NC_013361:1634226:1646955164695516492762322Escherichia coli O26:H11 str. 11368 chromosome, complete genomeAidA-I adhesin3e-60233
CU928160:1232510:1246613124661312489342322Escherichia coli IAI1 chromosome, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold2e-60233
NC_011741:1232510:1246613124661312489342322Escherichia coli IAI1 chromosome, complete genomeputative outer membrane autotransporter barrel pectin lyase fold2e-60233
NC_013353:1339263:1353366135336613556872322Escherichia coli O103:H2 str. 12009, complete genomeAidA-I adhesin-like protein8e-60231
CP002185:1298675:1312778131277813150992322Escherichia coli W, complete genome8e-60231
AP010958:1339263:1353366135336613556872322Escherichia coli O103:H2 str. 12009 DNA, complete genomeAidA-I adhesin-like protein8e-60231
CU928145:1300863:1315755131575513180642310Escherichia coli 55989 chromosome, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold9e-60231
NC_011748:1300863:1315755131575513180642310Escherichia coli 55989, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold9e-60231
NC_013364:1477248:1514816151481615165671752Escherichia coli O111:H- str. 11128, complete genome8e-59228
NC_000913:1188999:122002412200241220344321Escherichia coli K12, complete genome6e-54212
NC_004431:1443968:145920814592081459570363Escherichia coli CFT073, complete genome4e-54212
NC_011745:1287714:130172313017231302085363Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-53211
NC_011742:1221416:123664812366481237025378Escherichia coli S88 chromosome, complete genomehypothetical protein2e-47190
NC_008253:1228485:124237812423781242755378Escherichia coli 536, complete genomepart of hypothetical protein b1169 (putative adhesin)2e-47190
NC_008563:1217804:123303612330361233413378Escherichia coli APEC O1, complete genomehypothetical protein2e-47190
NC_009425:1:1047210472152564785Enterobacter sp. 638 plasmid pENTE01, complete sequenceouter membrane autotransporter2e-29130
NC_009425:1:787848174740Enterobacter sp. 638 plasmid pENTE01, complete sequenceouter membrane autotransporter2e-26120
NC_012125:3879917:3888198388819838909212724Salmonella enterica subsp. enterica serovar Paratyphi C strainautotransported protein7e-1995.5
NC_016863:3905875:3916060391606039189272868Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative autotransporter8e-1995.5
NC_011149:3863913:3879256387925638821232868Salmonella enterica subsp. enterica serovar Agona str. SL483,outer membrane autotransporter barrel domain9e-1995.5
NC_016860:3964000:3977717397771739805242808Salmonella enterica subsp. enterica serovar Typhimurium strputative autotransported protein1e-1895.1
NC_013716:2898434:2911789291178929146982910Citrobacter rodentium ICC168, complete genomeputative outer membrane autotransporter3e-1687
NC_013517:1055854:1140013114001311430843072Sebaldella termitidis ATCC 33386, complete genomeouter membrane autotransporter barrel domain protein5e-1686.3
NC_015663:2807574:2829400282940028361616762Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein9e-1685.5
NC_004431:1443968:145892014589201459057138Escherichia coli CFT073, complete genome4e-1583.2
NC_012947:44512:5269952699561963498Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane autotransporter barrel domain protein2e-1377.8
NC_012967:3769499:3788241378824137917383498Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-1377.8
NC_011745:1287714:130124013012401301419180Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-1377
NC_011742:1221416:123617912361791236358180Escherichia coli S88 chromosome, complete genomehypothetical protein3e-1377
NC_004431:1443968:145872514587251458904180Escherichia coli CFT073, complete genome3e-1377
NC_008253:1228485:124190912419091242088180Escherichia coli 536, complete genomepart of hypothetical protein b11693e-1377
NC_013892:202778:2073902073902103442955Xenorhabdus bovienii SS-2004 chromosome, complete genomeOuter membrane autotransporter8e-1272.4
NC_020063:2230000:2249441224944122548615421Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane autotransporter barrel domain-containing protein1e-1172
NC_010473:1661000:1680314168031416817141401Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein1e-1171.6
AC_000091:1574000:1594379159437915957791401Escherichia coli W3110 DNA, complete genome1e-1171.6
NC_000913:1570431:1590689159068915920891401Escherichia coli K12, complete genomeconserved protein, predicted pseudogene1e-1171.6
NC_012759:1462490:1482748148274814841481401Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-1171.6
NC_012967:1546000:1569232156923215706321401Escherichia coli B str. REL606 chromosome, complete genome1e-1171.6
NC_012947:2228235:2230071223007122316211551Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane autotransporter barrel domain protein1e-1171.6
NC_014618:2788533:2800332280033228046994368Enterobacter cloacae SCF1 chromosome, complete genomeouter membrane autotransporter barrel domain-containing protein1e-1171.6
NC_002655:1966464:1970492197049219718921401Escherichia coli O157:H7 EDL933, complete genomeputative ATP-binding component of a transport system and adhesin protein1e-1171.6
CP002516:2395578:2395578239557824009985421Escherichia coli KO11, complete genomeouter membrane autotransporter barrel domain protein2e-1170.9
NC_016902:2395578:2395578239557824009985421Escherichia coli KO11FL chromosome, complete genomeouter membrane autotransporter barrel domain-containing protein2e-1170.9
CP002185:1681327:1704944170494417102775334Escherichia coli W, complete genomepredicted lipoprotein2e-1170.9
NC_009800:1589000:1609488160948816149085421Escherichia coli HS, complete genome2e-1170.9
NC_010468:2345781:2345781234578123512015421Escherichia coli ATCC 8739, complete genomeouter membrane autotransporter barrel domain protein2e-1170.9
CU928160:1579375:1602899160289916083195421Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative exported protein2e-1170.9
NC_011741:1579375:1602899160289916083195421Escherichia coli IAI1 chromosome, complete genomeputative lipoprotein/autotransporter domain-containing protein2e-1170.9
NC_010067:2304313:2326436232643623288502415Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-1170.5
NC_010498:2555706:2556284255628425641977914Escherichia coli SMS-3-5, complete genomeouter membrane autotransporter3e-1170.1
NC_007618:1937261:1951873195187319538882016Brucella melitensis biovar Abortus 2308 chromosome I, complete5e-1169.7
NC_006932:1939145:1951994195199419567694776Brucella abortus biovar 1 str. 9-941 chromosome I, complete5e-1169.7
NC_016795:456110:4615084615084635232016Brucella abortus A13334 chromosome 1, complete sequenceouter membrane autotransporter5e-1169.7
NC_004310:1923404:1935263193526319400444782Brucella suis 1330 chromosome I, complete sequenceouter membrane autotransporter5e-1169.7
NC_017251:1923391:1935250193525019400314782Brucella suis 1330 chromosome I, complete genomeouter membrane autotransporter5e-1169.7
NC_016778:1216739:1222168122216812239341767Brucella canis HSK A52141 chromosome 1, complete sequenceouter membrane autotransporter5e-1169.7
NC_010742:1938428:1953196195319619550551860Brucella abortus S19 chromosome 1, complete sequenceouter membrane autotransporter5e-1169.7
NC_013119:1932402:1944264194426419490394776Brucella microti CCM 4915 chromosome 1, complete sequenceouter membrane autotransporter6e-1169.3
NC_004431:2747237:2748603274860327557667164Escherichia coli CFT073, complete genomeyapH homolog1e-1068.2
NC_017248:1933357:1948294194829419499911698Brucella melitensis NI chromosome chromosome I, complete sequenceExtracellular serine protease2e-1067.4
NC_017246:1942293:1957229195722919589261698Brucella melitensis M5-90 chromosome chromosome I, completeouter membrane autotransporter barrel domain-containing protein2e-1067.4
NC_017244:1941974:1956910195691019586071698Brucella melitensis M28 chromosome chromosome 1, complete sequenceouter membrane autotransporter2e-1067.4
NC_003317:48375:5378953789579134125Brucella melitensis 16M chromosome I, complete sequenceEXTRACELLULAR SERINE PROTEASE3e-1067
NC_016816:3333000:3357378335737833603352958Pantoea ananatis LMG 5342, complete genomeType V secretory pathway, adhesin AidA1e-0965.5
NC_017168:4509918:45280984528098453921511118Yersinia pestis A1122 chromosome, complete genomeputative autotransporter protein2e-0964.3
NC_017154:848500:87203687203688315311118Yersinia pestis D106004 chromosome, complete genomeputative autotransporter protein2e-0964.3
NC_008149:3648139:36716853671685368280211118Yersinia pestis Nepal516, complete genomeautotransporter protein2e-0964.3
NC_008150:3711953:37119533711953372307011118Yersinia pestis Antiqua, complete genomeputative autotransporter protein2e-0964.3
NC_010465:804249:80424980424981718712939Yersinia pseudotuberculosis YPIII, complete genomeouter membrane autotransporter barrel domain protein3e-0963.9
NC_009672:30000:3346233462390475586Ochrobactrum anthropi ATCC 49188 plasmid pOANT04, completeouter membrane autotransporter1e-0758.5
NC_009672:30000:4423644236529568721Ochrobactrum anthropi ATCC 49188 plasmid pOANT04, completeouter membrane autotransporter2e-0757.4
NC_015224:3892972:3919019391901939219642946Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative pertactin family virulence factor/autotransporter5e-0756.2
NC_013364:2898964:2923885292388529276193735Escherichia coli O111:H- str. 11128, complete genomeadhesin YfaL6e-0652.8