Pre_GI: BLASTP Hits

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Query: NC_009708:3542336:3549193 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 3549193, End: 3550797, Length: 1605

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:2158839:2170038217003821716421605Yersinia pestis A1122 chromosome, complete genomechitin binding domain-containing protein01082
NC_006155:1074298:1086291108629110878951605Yersinia pseudotuberculosis IP 32953, complete genomeputative carbohydrate-binding protein01082
NC_005810:754340:7663897663897679931605Yersinia pestis biovar Microtus str. 91001, complete genomeputative carbohydrate-binding protein01082
NC_008149:1002453:1013652101365210152561605Yersinia pestis Nepal516, complete genomecarbohydrate-binding protein01082
NC_003143:3583468:3590325359032535919291605Yersinia pestis CO92, complete genomeputative carbohydrate-binding protein01082
NC_010634:1056441:1068434106843410700381605Yersinia pseudotuberculosis PB1/+, complete genomechitin-binding domain-containing protein01082
NC_008150:3015000:3022003302200330236071605Yersinia pestis Antiqua, complete genomeputative carbohydrate-binding protein01082
NC_010465:3597000:3603049360304936046531605Yersinia pseudotuberculosis YPIII, complete genomechitin-binding domain 3 protein01082
NC_010159:3502350:3509207350920735108111605Yersinia pestis Angola, complete genomechitin binding domain protein01082
NC_009381:3228500:3234589323458932361931605Yersinia pestis Pestoides F chromosome, complete genomecarbohydrate-binding protein01082
NC_014029:3633955:3640812364081236424161605Yersinia pestis Z176003 chromosome, complete genomeputative carbohydrate-binding protein01082
NC_017154:3576256:3583113358311335847171605Yersinia pestis D106004 chromosome, complete genomeputative carbohydrate-binding protein01082
NC_017265:3375463:3381955338195533835591605Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative carbohydrate-binding protein01080
NC_004088:1075454:1086653108665310882571605Yersinia pestis KIM, complete genomehypothetical protein01079
NC_017160:3560153:3567010356701035686141605Yersinia pestis D182038 chromosome, complete genomecarbohydrate-binding protein01079
NC_005085:2774370:2792035279203527931951161Chromobacterium violaceum ATCC 12472, complete genomecarbohydrate-binding protein7e-24112
NC_010572:188500:2032932032932043751083Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative secreted cellulose-binding protein9e-21102
NC_013947:3080290:310734831073483108268921Stackebrandtia nassauensis DSM 44728 chromosome, complete genomechitin-binding domain 3 protein3e-1583.6
NC_020064:3998715:4049110404911040505371428Serratia marcescens FGI94, complete genomehypothetical protein3e-1480.1
NC_013929:2375613:2392612239261223936851074Streptomyces scabiei 87.22 chromosome, complete genomecellulose/chitin binding protein4e-1480.1
NC_016114:1435436:1457402145740214584811080Streptomyces flavogriseus ATCC 33331 chromosome, complete genomechitin-binding protein7e-1479.3
NC_016109:6640000:6653798665379866548981101Kitasatospora setae KM-6054, complete genomeputative cellulose-binding protein4e-1376.6
NC_003155:2730469:2749073274907327502481176Streptomyces avermitilis MA-4680, complete genomecellulose binding protein5e-1272.8
NC_021177:1418213:1435065143506514361291065Streptomyces fulvissimus DSM 40593, complete genomesecreted cellulose-binding protein2e-1067.8
NC_014837:3633378:3642777364277736443241548Pantoea sp. At-9b chromosome, complete genomechitin-binding domain 3 protein4e-1066.6
NC_015434:1173794:117978111797811180461681Verrucosispora maris AB-18-032 chromosome, complete genomecellulose-binding protein1e-0965.5
NC_013947:1696671:170058617005861701191606Stackebrandtia nassauensis DSM 44728 chromosome, complete genomechitin-binding domain 3 protein4e-0963.5
NC_007333:1457000:147270514727051473373669Thermobifida fusca YX, complete genomeputative secreted cellulose-binding protein2e-0861.2
NC_020995:3252500:3272174327217432735561383Enterococcus casseliflavus EC20, complete genomehypothetical protein6e-0756.2
NC_010336:1282265:1300030130003013012141185Francisella philomiragia subsp. philomiragia ATCC 25017, completehypothetical protein9e-0755.5
NC_017316:2637707:263770726377072638408702Enterococcus faecalis OG1RF chromosome, complete genomechitin binding protein1e-0655.1