Pre_GI: BLASTP Hits

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Query: NC_009708:1497898:1512418 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1512418, End: 1513311, Length: 894

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:3155741:315960531596053160498894Yersinia pseudotuberculosis PB1/+, complete genomedihydrodipicolinate synthetase7e-163573
NC_006155:3237990:324185432418543242747894Yersinia pseudotuberculosis IP 32953, complete genomeprobable N-acetylneuraminate lyase7e-163573
NC_008800:1300500:132587913258791326769891Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,N-acetylneuraminate lyase5e-158556
NC_016445:1363831:139759613975961398492897Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeN-acetylneuraminate lyase7e-120430
NC_012668:1688500:172041617204161721312897Vibrio cholerae MJ-1236 chromosome 1, complete sequenceN-acetylneuraminate lyase7e-120430
NC_012578:1838470:187332918733291874225897Vibrio cholerae M66-2 chromosome I, complete sequenceputative N-acetylneuraminate lyase7e-120430
NC_009457:1444449:147929914792991480195897Vibrio cholerae O395 chromosome 2, complete sequencedihydrodipicolinate synthetase family protein7e-120430
NC_017270:1755552:176494617649461765842897Vibrio cholerae LMA3984-4 chromosome chromosome I, completeN-acetylneuraminate lyase4e-119427
NC_020418:1397112:140917414091741410064891Morganella morganii subsp. morganii KT, complete genomeN-acetylneuraminate lyase4e-114410
NC_017270:1755552:177647717764771776911435Vibrio cholerae LMA3984-4 chromosome chromosome I, completeN-acetylneuraminate lyase3e-60232
NC_019960:1272956:128897312889731289890918Prevotella dentalis DSM 3688 chromosome 1, complete sequencedihydrodipicolinate synthase/N-acetylneuraminate lyase1e-44180
NC_015311:2826000:284866928486692849586918Prevotella denticola F0289 chromosome, complete genomedihydrodipicolinate synthetase family2e-42172
NC_012984:3077004:308179330817933082671879Lactobacillus plantarum JDM1, complete genomeN-acetylneuraminate lyase5e-22105
NC_009785:130252:130252130252131169918Streptococcus gordonii str. Challis substr. CH1, complete genomeN-acetylneuraminate lyase1e-21103
NC_017243:685783:702898702898703812915Brachyspira intermedia PWS/A chromosome, complete genomeN-acetylneuraminate lyase6e-21101
NC_019897:3810000:386199338619933862901909Thermobacillus composti KWC4 chromosome, complete genomedihydrodipicolinate synthase/N-acetylneuraminate lyase2e-1996.7
NC_014841:131308:147348147348148253906Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceDihydrodipicolinate synthase3e-1892.8
NC_014330:1010000:103129410312941032190897Brachyspira pilosicoli 95/1000 chromosome, complete genomeN-acetylneuraminate lyase3e-1892.8
NC_004368:53307:539665396654895930Streptococcus agalactiae NEM316, complete genomehypothetical protein3e-1892.8
NC_013515:1125739:113665811366581137587930Streptobacillus moniliformis DSM 12112, complete genomeN-acetylneuraminate lyase2e-1790.1
NC_017270:1755552:1775267177526717762801014Vibrio cholerae LMA3984-4 chromosome chromosome I, completetransposase OrfAB subunit B3e-1789.4
NC_020291:4305521:431802643180264318916891Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomedihydrodipicolinate synthase DapA8e-1787.8
NC_002677:1822500:182462718246271825529903Mycobacterium leprae TN, complete genomedihydrodipicolinate synthase2e-1686.3
NC_014500:4049384:406976940697694070653885Dickeya dadantii 3937 chromosome, complete genomedihydrodipicolinate synthase7e-1684.7
NC_015389:1782825:180457818045781805474897Coriobacterium glomerans PW2 chromosome, complete genomedihydrodipicolinate synthetase7e-1684.7
NC_019903:2578966:259749325974932598368876Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,dihydrodipicolinate synthase6e-1581.6
NC_011751:3453683:350171235017123502629918Escherichia coli UMN026 chromosome, complete genomeN-acetylneuraminate lyase3e-1479.3
NC_004431:3409389:347860534786053479522918Escherichia coli CFT073, complete genomeN-acetylneuraminate lyase3e-1479.3
NC_011742:3799788:381279538127953813679885Escherichia coli S88 chromosome, complete genomedihydrodipicolinate synthase4e-1479
NC_008563:3888232:389805538980553898939885Escherichia coli APEC O1, complete genomehypothetical protein4e-1479
NC_007946:3855445:386526038652603866144885Escherichia coli UTI89, complete genomedihydrodipicolinate synthase4e-1479
NC_011745:4862218:486899548689954869912918Escherichia coli ED1a chromosome, complete genomeN-acetylneuraminate lyase4e-1479
NC_015573:2463123:250941225094122510296885Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDihydrodipicolinate synthase3e-1375.9
NC_008148:2231045:226993722699372270821885Rubrobacter xylanophilus DSM 9941, complete genomedihydrodipicolinate synthase3e-1375.9
NC_014650:475662:504762504762505679918Geobacillus sp. Y4.1MC1 chromosome, complete genome2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase3e-1375.9
NC_014364:394899:437035437035437919885Spirochaeta smaragdinae DSM 11293 chromosome, complete genomedihydrodipicolinate synthetase3e-1375.9
NC_010511:4258000:428375942837594284658900Methylobacterium sp. 4-46 chromosome, complete genomedihydrodipicolinate synthetase3e-1375.9
NC_014837:809911:827734827734828618885Pantoea sp. At-9b chromosome, complete genomedihydrodipicolinate synthetase4e-1375.5
NC_008698:1556223:156600715660071566900894Thermofilum pendens Hrk 5, complete genomedihydrodipicolinate synthetase6e-1375.1
NC_008526:74500:880858808588990906Lactobacillus casei ATCC 334, complete genomeDihydrodipicolinate synthase/N-acetylneuraminate lyase7e-1374.7
NC_012225:1575432:159741815974181598299882Brachyspira hyodysenteriae WA1, complete genomedihydrodipicolinate synthase1e-1273.9
NC_011894:4013830:403111840311184032017900Methylobacterium nodulans ORS 2060, complete genomedihydrodipicolinate synthetase1e-1273.9
NC_014206:1618988:163353416335341634466933Geobacillus sp. C56-T3 chromosome, complete genomedihydrodipicolinate synthetase2e-1273.6
NC_014166:1008266:101307710130771013976900Arcobacter nitrofigilis DSM 7299 chromosome, complete genomedihydrodipicolinate synthase2e-1273.6
NC_011894:5056901:506834350683435069242900Methylobacterium nodulans ORS 2060, complete genomedihydrodipicolinate synthetase3e-1272.8
NC_006510:1995916:200440720044072005309903Geobacillus kaustophilus HTA426, complete genomedihydrodipicolinate synthase3e-1272.8
NC_015733:2581324:260843226084322609325894Pseudomonas putida S16 chromosome, complete genomedihydrodipicolinate synthetase9e-1271.2
NC_016605:132253:151564151564152451888Pediococcus claussenii ATCC BAA-344 chromosome, complete genomedihydrodipicolinate synthase1e-1170.9
NC_002937:1915787:193342419334241934302879Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completedihydrodipicolinate synthase2e-1169.7
NC_020409:560278:569967569967570848882Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeDihydrodipicolinate synthase3e-1169.7
NC_013889:413909:432159432159433037879Thioalkalivibrio sp. K90mix chromosome, complete genomedihydrodipicolinate synthase3e-1169.3
NC_014926:165312:167716167716168588873Thermovibrio ammonificans HB-1 chromosome, complete genomedihydrodipicolinate synthase3e-1169.3
NC_006350:1084930:108775910877591088655897Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative dihydrodipicolinate synthetase5e-1168.9
NC_018080:4436646:445444544544454455323879Pseudomonas aeruginosa DK2 chromosome, complete genomedihydrodipicolinate synthase4e-1168.9
NC_016745:546249:553172553172554047876Oceanimonas sp. GK1 chromosome, complete genomedihydrodipicolinate synthase4e-1168.9
NC_019977:253895:269973269973270848876Methanomethylovorans hollandica DSM 15978, complete genomedihydrodipicolinate synthase6e-1168.6
NC_018644:446102:4693994693994704121014Alpha proteobacterium HIMB59 chromosome, complete genomedihydrodipicolinate synthetase family protein8e-1167.8
NC_020410:495184:525097525097525891795Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeDihydrodipicolinate synthase1e-1067
NC_008786:1332041:133390913339091334799891Verminephrobacter eiseniae EF01-2, complete genomedihydrodipicolinate synthase2e-1067
NC_009725:496443:542505542505543299795Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein2e-1067
NC_019842:484933:534118534118535062945Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,dihydrodipicolinate synthase2e-1066.6
NC_015216:1941000:195626419562641957154891Methanobacterium sp. AL-21 chromosome, complete genomedihydrodipicolinate synthase2e-1066.6
NC_016641:2773757:278387627838762784763888Paenibacillus terrae HPL-003 chromosome, complete genomedihydrodipicolinate synthase2e-1066.2
NC_016613:2596464:259754425975442598428885Vibrio sp. EJY3 chromosome 1, complete sequencedihydrodipicolinate synthase2e-1066.2
NC_009792:4693152:471872147187214719692972Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-1065.9
NC_020272:3396800:340451934045193405313795Bacillus amyloliquefaciens IT-45, complete genomedihydrodipicolinate synthase3e-1065.9
NC_014532:2108897:211735121173512118235885Halomonas elongata DSM 2581, complete genomeputative dihydrodipicolinate synthetase4e-1065.5
NC_015410:3502099:352728135272813528159879Pseudomonas mendocina NK-01 chromosome, complete genomedihydrodipicolinate synthase5e-1065.5
NC_019904:4744744:474474447447444745604861Echinicola vietnamensis DSM 17526 chromosome, complete genomedihydrodipicolinate synthase6e-1065.1
NC_014532:3596097:362035236203523621236885Halomonas elongata DSM 2581, complete genomeputative dihydrodipicolinate synthetase5e-1065.1
NC_014836:33278:492984929850179882Desulfurispirillum indicum S5 chromosome, complete genomedihydrodipicolinate synthase5e-1065.1
NC_016885:679890:698486698486699349864Pyrobaculum oguniense TE7 chromosome, complete genomedihydrodipicolinate synthase/N-acetylneuraminate lyase5e-1065.1
NC_015953:5444572:545150554515055452404900Streptomyces sp. SirexAA-E chromosome, complete genomedihydrodipicolinate synthase7e-1064.7
NC_013851:2729000:273402927340292734904876Allochromatium vinosum DSM 180 chromosome, complete genomedihydrodipicolinate synthase1e-0964.3
NC_014328:3120145:312559631255963126492897Clostridium ljungdahlii ATCC 49587 chromosome, complete genomedihydrodipicolinate synthase9e-1064.3
NC_020411:278000:292444292444293316873Hydrogenobaculum sp. HO, complete genomedihydrodipicolinate synthase9e-1064.3
NC_015557:278000:292412292412293284873Hydrogenobaculum sp. 3684 chromosome, complete genomedihydrodipicolinate synthase9e-1064.3
NC_015587:278000:292448292448293320873Hydrogenobaculum sp. SHO chromosome, complete genomeDihydrodipicolinate synthase9e-1064.3
NC_015677:2715912:274053427405342741379846Ramlibacter tataouinensis TTB310 chromosome, complete genomedihydrodipicolinate synthase2e-0963.5
NC_015379:4426827:443420144342014435112912Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Dihydrodipicolinate synthase3e-0962.8
NC_011898:598014:612214612214613095882Clostridium cellulolyticum H10, complete genomedihydrodipicolinate synthase3e-0962.8
NC_016629:2971860:298429929842992985174876Desulfovibrio africanus str. Walvis Bay chromosome, completeDihydrodipicolinate synthase4e-0962.4
NC_009655:2148433:215301421530142153892879Actinobacillus succinogenes 130Z chromosome, complete genomedihydrodipicolinate synthase4e-0962.4
NC_016830:1645879:164836616483661649244879Pseudomonas fluorescens F113 chromosome, complete genomedihydrodipicolinate synthase6e-0961.6
NC_011894:4013830:404643440464344047333900Methylobacterium nodulans ORS 2060, complete genomedihydrodipicolinate synthetase1e-0860.8
NC_013524:392089:409654409654410583930Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genome2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase1e-0860.8
NC_014364:815346:821141821141822067927Spirochaeta smaragdinae DSM 11293 chromosome, complete genomedihydrodipicolinate synthase1e-0860.8
NC_014972:544146:544146544146545027882Desulfobulbus propionicus DSM 2032 chromosome, complete genomedihydrodipicolinate synthase1e-0860.5
NC_011894:3988500:400574640057464006645900Methylobacterium nodulans ORS 2060, complete genomedihydrodipicolinate synthetase2e-0860.5
NC_010501:4379920:439681743968174397695879Pseudomonas putida W619, complete genomedihydrodipicolinate synthase2e-0860.1
NC_007005:1738500:174134417413441742222879Pseudomonas syringae pv. syringae B728a, complete genomedihydrodipicolinate synthase2e-0860.1
NC_011894:5056901:509607350960735096972900Methylobacterium nodulans ORS 2060, complete genomedihydrodipicolinate synthetase2e-0860.1
NC_013939:212331:217959217959218840882Deferribacter desulfuricans SSM1, complete genomedihydrodipicolinate synthase2e-0860.1
NC_014541:1414627:143592614359261436804879Ferrimonas balearica DSM 9799 chromosome, complete genomedihydrodipicolinate synthase2e-0860.1
AC_000091:273325:281481281481282410930Escherichia coli W3110 DNA, complete genomepredicted lyase/synthase2e-0860.1
NC_010473:247429:255585255585256514930Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-6 prophage; predicted lyase/synthase2e-0860.1
NC_000913:272071:281481281481282410930Escherichia coli K12, complete genomeCP4-6 prophage; predicted lyase/synthase2e-0860.1
NC_010118:133256:171931171931172821891Candidatus Sulcia muelleri GWSS, complete genomedihydrodipicolinate synthase2e-0859.7
NC_015865:503585:518326518326519207882Thermococcus sp. 4557 chromosome, complete genomedihydrodipicolinate synthase2e-0859.7
NC_011831:2213306:223003122300312230936906Chloroflexus aggregans DSM 9485, complete genomedihydrodipicolinate synthetase4e-0858.9
NC_014733:1857020:185812418581241858996873Methylovorus sp. MP688 chromosome, complete genomedihydrodipicolinate synthase4e-0858.9
NC_002939:173833:177446177446178318873Geobacter sulfurreducens PCA, complete genomedihydrodipicolinate synthase5e-0858.5
NC_014499:181000:197770197770198483714Candidatus Sulcia muelleri CARI chromosome, complete genomedihydrodipicolinate synthase7e-0858.2
NC_012483:3731542:379623337962333797123891Acidobacterium capsulatum ATCC 51196, complete genomedihydrodipicolinate synthase7e-0858.2
NC_019815:782987:802398802398803297900Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneidihydrodipicolinate synthase7e-0858.2
NC_020299:149118:168002168002168898897Candidatus Kinetoplastibacterium oncopeltii TCC290E, completedihydrodipicolinate synthase1e-0757.4
NC_012669:2399649:241518224151822416165984Beutenbergia cavernae DSM 12333, complete genomedihydrodipicolinate synthase2e-0757
NS_000191:923949:940273940273941148876Uncultured Termite group 1 bacterium phylotype Rs-D17, completedihydrodipicolinate synthase2e-0756.6
NC_008255:1500067:152332315233231524216894Cytophaga hutchinsonii ATCC 33406, complete genomedihydrodipicolinate synthase2e-0756.6
NC_020419:923949:940273940273941148876Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completedihydrodipicolinate synthase2e-0756.6
NC_012563:3580000:359683935968393597717879Clostridium botulinum A2 str. Kyoto, complete genomedihydrodipicolinate synthase2e-0756.6
NC_010804:2206000:222802922280292228934906Burkholderia multivorans ATCC 17616 chromosome 1, completedihydrodipicolinate synthase4e-0755.8
NC_017986:4091051:409235640923564093243888Pseudomonas putida ND6 chromosome, complete genomedihydrodipicolinate synthase4e-0755.8
NC_009495:3340000:335487633548763355754879Clostridium botulinum A str. ATCC 3502 chromosome, complete genomedihydrodipicolinate synthase3e-0755.8
NC_009697:3316000:333086533308653331743879Clostridium botulinum A str. ATCC 19397 chromosome, completedihydrodipicolinate synthase3e-0755.8
NC_009698:3211131:322797232279723228850879Clostridium botulinum A str. Hall chromosome, complete genomedihydrodipicolinate synthase3e-0755.8
NC_015684:2369651:2370114237011423712501137Oligotropha carboxidovorans OM5 chromosome, complete genomedihydrodipicolinate synthase DapA3e-0755.8
NC_019978:686362:699447699447700325879Halobacteroides halobius DSM 5150, complete genomedihydrodipicolinate synthase5e-0755.5
NC_015713:1594114:161146916114691612365897Simkania negevensis Z chromosome gsn.131, complete genomedihydrodipicolinate synthase5e-0755.5
NC_011766:1035858:103755610375561038455900Desulfurococcus kamchatkensis 1221n chromosome, complete genomePutative dihidrodipicolinate synthase6e-0755.1
NC_006300:60484:678086780868686879Mannheimia succiniciproducens MBEL55E, complete genomeDapA protein8e-0754.7
NC_004545:96422:100159100159101043885Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomedihydrodipicolinate synthase7e-0754.7
NC_008698:1612873:161287316128731613778906Thermofilum pendens Hrk 5, complete genomedihydrodipicolinate synthase7e-0754.7
NC_004193:2921103:292484629248462925772927Oceanobacillus iheyensis HTE831, complete genomeputative 5-dehydro-4-deoxyglucarate dehydratase1e-0653.9
NC_014639:3584000:359846935984693599269801Bacillus atrophaeus 1942 chromosome, complete genomedihydrodipicolinate synthase2e-0653.5
NC_020075:637420:641243641243642142900Candidatus Blochmannia chromaiodes str. 640, complete genomedihydrodipicolinate synthase2e-0653.5
CP002207:3584000:359846935984693599269801Bacillus atrophaeus 1942, complete genomedihydrodipicolinate synthase2e-0653.5
NC_012467:916000:935703935703936638936Streptococcus pneumoniae P1031, complete genomedihydrodipicolinate synthase2e-0653.1
NC_008705:2763131:278992327899232790873951Mycobacterium sp. KMS, complete genomedihydrodipicolinate synthase3e-0652.8
NC_008146:2744612:277203527720352772985951Mycobacterium sp. MCS, complete genomedihydrodipicolinate synthase3e-0652.8
NC_018750:5828000:583719358371935838101909Streptomyces venezuelae ATCC 10712, complete genomeDihydrodipicolinate synthase3e-0652.8
NC_014624:1675500:171362717136271714520894Eubacterium limosum KIST612 chromosome, complete genomedihydrodipicolinate synthetase family protein6e-0651.6
NC_013943:2610902:262311226231122623984873Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomedihydrodipicolinate synthase7e-0651.6
NC_008061:2193000:220020322002032201126924Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencedihydrodipicolinate synthetase8e-0651.2
NC_008543:61000:671916719168114924Burkholderia cenocepacia HI2424 chromosome 2, complete sequencedihydrodipicolinate synthetase8e-0651.2
NC_018643:641360:647122647122648006885Alpha proteobacterium HIMB5 chromosome, complete genomedihydrodipicolinate synthase9e-0651.2