Pre_GI: BLASTP Hits

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Query: NC_009664:533021:537206 Kineococcus radiotolerans SRS30216, complete genome

Start: 537206, End: 537484, Length: 279

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008576:4701930:104531045310722270Magnetococcus sp. MC-1, complete genomeflagellar biosynthetic protein FliQ4e-1373.6
NC_009253:2615777:261761926176192617888270Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar biosynthetic protein FliQ4e-1270.1
NC_009617:4911595:491564949156494915918270Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeexport protein FliQ2e-1167.4
NC_015391:2059191:207716920771692077432264Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliQ1e-1065.5
NC_017238:272980:287041287041287304264Borrelia afzelii PKo chromosome, complete genomeflagellar biosynthetic protein FliQ2e-1064.7
NC_008277:272741:286802286802287065264Borrelia afzelii PKo, complete genomeflagellar biosynthesis protein2e-1064.7
NC_021182:2883716:289824828982482898517270Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FliQ2e-1064.3
NC_009698:2649453:265131626513162651585270Clostridium botulinum A str. Hall chromosome, complete genomeflagellar biosynthesis protein FliQ2e-1064.3
NC_008346:983816:984593984593984865273Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein3e-1063.9
NC_010520:2860960:286282328628232863092270Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar biosynthesis protein FliQ3e-1063.9
NC_004344:26828:558125581256084273Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein3e-1063.5
NC_015714:768500:780464780464780745282Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeIIISP family Type III (virulence-related) secretory pathway protein5e-1063.2
NC_016842:775368:787166787166787447282Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein5e-1063.2
NC_016843:775371:787353787353787634282Treponema pallidum subsp. pertenue str. Gauthier chromosome,IIISP family Type III (virulence-related) secretory pathway protein5e-1063.2
NC_016844:775334:787520787520787801282Treponema pallidum subsp. pallidum DAL-1 chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein5e-1063.2
NC_016848:775822:787620787620787901282Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein5e-1063.2
NC_000919:773784:785582785582785866285Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar biosynthetic protein (fliQ)4e-1063.2
NC_010741:775000:787030787030787314285Treponema pallidum subsp. pallidum SS14, complete genomeflagellar biosynthetic protein4e-1063.2
NC_017268:775000:786832786832787116285Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar biosynthetic protein FliQ4e-1063.2
NC_021508:775264:787062787062787346285Treponema pallidum subsp. pallidum SS14, complete genomeIIISP family Type III (virulence-related) secretory pathway protein4e-1063.2
NC_007759:1356439:135817813581781358447270Syntrophus aciditrophicus SB, complete genomeflagellar biosynthetic protein4e-1063.2
NC_020291:4903981:492656349265634926832270Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biosynthetic protein FliQ6e-1062.8
NC_006156:271410:286692286692286955264Borrelia garinii PBi chromosome linear, complete sequenceflagellar biosynthesis protein6e-1062.8
NC_013851:3300278:330435433043543304623270Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar biosynthetic protein FliQ7e-1062.8
NC_021184:2238500:225807322580732258342270Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliQ9e-1062.4
NC_016893:43234:570205702057289270Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar biosynthesis protein1e-0962
NC_018664:1663324:166913216691321669398267Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthetic protein FliQ1e-0961.6
NC_011728:269853:287278287278287541264Borrelia burgdorferi ZS7, complete genomeflagellar biosynthetic protein FliQ2e-0961.6
NC_001318:270488:287910287910288173264Borrelia burgdorferi B31, complete genomeflagellar biosynthesis protein (fliQ)2e-0961.6
NC_015921:272517:286475286475286738264Borrelia bissettii DN127 chromosome, complete genomeflagellar biosynthetic protein FliQ2e-0961.6
NC_009012:574145:595110595110595379270Clostridium thermocellum ATCC 27405, complete genomeflagellar biosynthetic protein FliQ4e-0960.1
NC_008593:1103293:112253111225311122800270Clostridium novyi NT, complete genomeflagellar biosynthetic protein FliQ6e-0959.7
NC_014328:1135854:114378211437821144051270Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar biosynthesis protein FliQ5e-0959.7
NC_012225:377441:380770380770381039270Brachyspira hyodysenteriae WA1, complete genomeflagellar biosynthetic protein (fliQ)8e-0958.9
NC_014150:233194:250344250344250613270Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar biosynthetic protein FliQ8e-0958.9
NC_011126:555483:588780588780589049270Hydrogenobaculum sp. Y04AAS1, complete genomeflagellar biosynthetic protein FliQ1e-0858.5
NC_014652:628435:650692650692650961270Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthetic protein fliq1e-0858.2
NC_018607:1134900:113570811357081135977270Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar biosynthetic protein FliQ2e-0858.2
NC_017243:1499757:150576515057651505983219Brachyspira intermedia PWS/A chromosome, complete genomeflagellar biosynthetic protein (fliQ)5e-0856.2
NC_007519:3527207:354193335419333542202270Desulfovibrio alaskensis G20 chromosome, complete genomeflagellar biosynthetic protein FliQ1e-0755.5
NC_008710:277207:289921289921290184264Borrelia turicatae 91E135, complete genomeflagellar biosynthetic protein FliQ1e-0755.5
NC_002947:4931476:494736649473664947635270Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein1e-0755.1
NC_004129:1848701:185350818535081853777270Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis protein2e-0754.7
NC_015500:1337180:135649513564951356764270Treponema brennaborense DSM 12168 chromosome, complete genomeflagellar biosynthetic protein FliQ2e-0754.3
NC_017986:4374979:437967543796754379944270Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein FliQ2e-0754.3
NC_009512:1691930:169662616966261696895270Pseudomonas putida F1, complete genomeflagellar biosynthetic protein FliQ2e-0754.3
NC_007492:1735595:173726717372671737536270Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis protein5e-0753.1
NC_012791:2386000:240476924047692404951183Variovorax paradoxus S110 chromosome 1, complete genomeexport protein FliQ family 37e-0752.8
NC_009654:3849774:387688438768843877153270Marinomonas sp. MWYL1, complete genomeflagellar biosynthetic protein FliQ7e-0752.8
NC_007645:3343815:335881133588113359080270Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, component EscS8e-0752.4
NC_005126:4423964:443890444389044439170267Photorhabdus luminescens subsp. laumondii TTO1, complete genomeType III secretion component protein SctS9e-0752.4
NC_010723:833870:850585850585850854270Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar biosynthetic protein FliQ1e-0652
NC_016894:2931213:293601829360182936284267Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar biosynthesis protein FliQ1e-0652
NC_020126:8080574:808962680896268089895270Myxococcus stipitatus DSM 14675, complete genomeputative type III secretion system protein1e-0652
NC_012962:1189021:119535111953511195617267Photorhabdus asymbiotica, complete genometype iii secretion component protein scts1e-0652
NC_000918:1353310:137931313793131379582270Aquifex aeolicus VF5, complete genomeflagellar biosynthesis protein FliQ1e-0652
NC_014366:1814000:183466718346671834936270Gamma proteobacterium HdN1, complete genomeFlagellar biosynthesis protein FliQ2e-0651.2
NC_019940:293476:300635300635300904270Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar biosynthetic protein FliQ2e-0651.2
NC_010674:858397:872278872278872547270Clostridium botulinum B str. Eklund 17B, complete genomeflagellar biosynthetic protein FliQ3e-0650.4
NC_010501:4080937:409666440966644096933270Pseudomonas putida W619, complete genomeflagellar biosynthetic protein FliQ3e-0650.4
NC_012440:659646:664958664958665227270Persephonella marina EX-H1, complete genomeflagellar biosynthetic protein FliQ3e-0650.4
NC_015379:2999965:301395230139523014215264Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Flagellar biosynthetic protein5e-0649.7
NC_013892:2689645:269053326905332690802270Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar biosynthesis protein6e-0649.7
NC_014926:1381152:141155514115551411824270Thermovibrio ammonificans HB-1 chromosome, complete genomeflagellar biosynthetic protein FliQ7e-0649.3