Pre_GI: BLASTP Hits

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Query: NC_009512:1518113:1551949 Pseudomonas putida F1, complete genome

Start: 1551949, End: 1553121, Length: 1173

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:1719407:1741521174152117426931173Pseudomonas fluorescens F113 chromosome, complete genomeputative MFS Superfamily transporter precursor4e-85315
NC_004129:1741816:1767111176711117682711161Pseudomonas fluorescens Pf-5, complete genomemajor facilitator family transporter8e-80297
NC_008150:905000:9212039212039223541152Yersinia pestis Antiqua, complete genomehypothetical protein2e-30133
NC_008149:2773139:2775206277520627763571152Yersinia pestis Nepal516, complete genomehypothetical protein3e-30132
NC_005810:1520000:1536243153624315373941152Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-30132
NC_006155:1807902:1825357182535718265081152Yersinia pseudotuberculosis IP 32953, complete genomepossible MFS Superfamily transporter3e-30132
NC_004088:2937077:2939144293914429402951152Yersinia pestis KIM, complete genometransport protein3e-30132
NC_003143:1691000:1707339170733917084901152Yersinia pestis CO92, complete genomehypothetical protein3e-30132
NC_010634:1809500:1825566182556618267171152Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-30132
NC_009381:1655731:1657798165779816589491152Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-30132
NC_009708:2788855:2790922279092227920731152Yersinia pseudotuberculosis IP 31758 chromosome, complete genomemajor facilitator transporter3e-30132
NC_014029:1760948:1781844178184417829951152Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-30132
NC_017154:1707500:1723937172393717250881152Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-30132
NC_017160:2054289:2056356205635620575071152Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-30132
NC_017168:3948514:3950581395058139517321152Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-30132
NC_017265:2557476:2559543255954325606941152Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-30132
NC_010465:2820500:2821372282137228225231152Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF12283e-30132
NC_008800:3061484:3063522306352230646941173Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-29129
NC_015224:1703130:1720433172043317216051173Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-28127
NC_015566:4662171:4668155466815546693181164Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-21104
NC_010551:1462827:1475730147573014769711242Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceprotein of unknown function DUF12285e-1582.4
NC_011662:131956:1494221494221506301209Thauera sp. MZ1T, complete genomeprotein of unknown function DUF12283e-1376.3
NC_010172:480000:5291465291465303661221Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF12287e-1272
NC_016641:373623:3955093955093967501242Paenibacillus terrae HPL-003 chromosome, complete genomepermease of the major facilitator superfamily protein6e-0962.4
NC_007164:1839154:1871344187134418724831140Corynebacterium jeikeium K411, complete genomeputative permease of the major facilitator superfamily1e-0757.8
NC_009792:3225965:3225965322596532271551191Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-0654.7
NC_004547:913553:9347149347149358801167Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-0653.5
NC_012846:1837924:1867809186780918689871179Bartonella grahamii as4aup, complete genomeputative sugar transporter3e-0653.5
NC_020300:1344453:1348001134800113491731173Bartonella australis Aust/NH1, complete genomeputative sugar transporter8e-0652