Pre_GI: BLASTP Hits

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Query: NC_008593:1461771:1469396 Clostridium novyi NT, complete genome

Start: 1469396, End: 1469848, Length: 453

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017295:1809386:183026018302601830715456Clostridium acetobutylicum EA 2018 chromosome, complete genomeFerric uptake regulation protein3e-49193
NC_003030:1811820:183084718308471831302456Clostridium acetobutylicum ATCC 824, complete genomeFerric uptake regulation protein3e-49193
NC_015687:1811573:183244718324471832902456Clostridium acetobutylicum DSM 1731 chromosome, complete genomeferric uptake regulation protein3e-49193
NC_009699:2733529:274603327460332746485453Clostridium botulinum F str. Langeland chromosome, complete genomeFUR family transcriptional regulator5e-48189
NC_009495:2685646:269806926980692698521453Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeFUR family transcriptional regulator5e-48189
NC_014328:1307490:131779513177951318253459Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeferric uptake regulation protein6e-47186
NC_021182:2422226:244500824450082445472465Clostridium pasteurianum BC1, complete genomeFe2+/Zn2+ uptake regulation protein4e-43173
NC_019897:2004050:202674620267462027201456Thermobacillus composti KWC4 chromosome, complete genomeFe2+/Zn2+ uptake regulation protein5e-32136
NC_018870:1506918:151338915133891513829441Thermacetogenium phaeum DSM 12270 chromosome, complete genomeferric uptake regulation protein Fur9e-32135
NC_014377:1298806:130155113015511302018468Thermosediminibacter oceani DSM 16646 chromosome, complete genomeferric uptake regulator, Fur family7e-30129
NC_019978:2036779:204052320405232040954432Halobacteroides halobius DSM 5150, complete genomeFe2+/Zn2+ uptake regulation protein7e-30129
NC_020409:621792:674484674484674921438Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFerric uptake regulation protein2e-1994.4
NC_014654:1802007:180312018031201803512393Halanaerobium sp. 'sapolanicus' chromosome, complete genomeferric uptake regulator, Fur family3e-1994.4
NC_019897:3025871:304313930431393043582444Thermobacillus composti KWC4 chromosome, complete genomeFe2+/Zn2+ uptake regulation protein3e-1994
NC_012673:2368971:237224823722482372691444Exiguobacterium sp. AT1b, complete genomeferric uptake regulator, Fur family2e-1891.3
NC_012121:1444633:146067414606741461129456Staphylococcus carnosus subsp. carnosus TM300, complete genometranscription regulator Fur family2e-1890.9
NC_002939:1505701:150792015079201508351432Geobacter sulfurreducens PCA, complete genomeferric uptake regulation protein Fur2e-1890.9
NC_009092:1874888:191102519110251911456432Shewanella loihica PV-4, complete genomeferric uptake regulator, Fur family7e-1889.4
NC_018704:645843:655343655343655792450Amphibacillus xylanus NBRC 15112, complete genomeperoxide-responsive repressor PerR1e-1788.6
NC_014171:521996:527287527287527715429Bacillus thuringiensis BMB171 chromosome, complete genomeperoxide operon regulator1e-1788.6
NC_017208:516127:521417521417521845429Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeperoxide operon regulator1e-1788.6
NC_011567:388358:398178398178398636459Anoxybacillus flavithermus WK1, complete genomePeroxide regulon repressor PerR, fur family2e-1787.8
NC_018012:121793:124163124163124726564Thiocystis violascens DSM 198 chromosome, complete genomeFe2+/Zn2+ uptake regulation protein2e-1787.4
NC_004193:950000:955474955474955917444Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator3e-1787.4
NC_003552:1157294:116021011602101160659450Methanosarcina acetivorans C2A, complete genomeferric uptake regulation protein5e-1786.7
NC_010556:691498:696944696944697378435Exiguobacterium sibiricum 255-15, complete genomeferric uptake regulator, Fur family7e-1786.3
NC_018665:650847:655281655281655715435Exiguobacterium antarcticum B7 chromosome, complete genomeFerric uptake regulator, Fur family7e-1786.3
NC_014972:3227500:323052832305283230944417Desulfobulbus propionicus DSM 2032 chromosome, complete genomeFur family ferric uptake regulator9e-1785.9
NC_010612:4501414:451795845179584518371414Mycobacterium marinum M, complete genomeZinc uptake regulation protein Zur4e-1683.6
NC_008820:1143500:114574011457401146300561Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein5e-1683.2
NC_007626:1038214:106976710697671070192426Magnetospirillum magneticum AMB-1, complete genomeFe2+/Zn2+ uptake regulation protein1e-1582.4
NC_014219:2931796:294374629437462944189444Bacillus selenitireducens MLS10 chromosome, complete genomeferric uptake regulator, Fur family1e-1581.6
NC_016887:1680338:169742616974261697860435Nocardia cyriacigeorgica GUH-2, complete genomeferric uptake regulator2e-1581.3
NC_015848:2684275:270026327002632700655393Mycobacterium canettii CIPT 140010059, complete genomeputative ferric uptake regulation protein FURB2e-1581.3
NC_009525:2635792:265361826536182654010393Mycobacterium tuberculosis H37Ra, complete genomeferric uptake regulation protein FurB2e-1581.3
NC_012943:1769445:177166117716611772053393Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeferric uptake regulation protein furB2e-1581.3
NC_016768:1769332:177154817715481771940393Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeferric uptake regulation protein furB2e-1581.3
NC_020387:1257163:125716312571631257588426Dehalococcoides mccartyi BTF08, complete genometranscriptional regulator, Fur family2e-1581.3
NC_016002:3077648:308504730850473085475429Pseudogulbenkiania sp. NH8B, complete genomeFur family ferric uptake regulator5e-1579.7
NC_015957:8845274:884825888482588848683426Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFur family ferric uptake regulator7e-1579.3
NC_007912:3466966:346696634669663467373408Saccharophagus degradans 2-40, complete genomeHelix-turn-helix, AraC type8e-1579.3
NC_014391:4617688:461872646187264619130405Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeferric-uptake regulator1e-1478.6
NC_017187:691769:691769691769692236468Arcobacter butzleri ED-1, complete genomeferric uptake regulation protein5e-1476.6
NC_015276:565701:585126585126585536411Marinomonas mediterranea MMB-1 chromosome, complete genomeferric uptake regulator, Fur family1e-1375.5
NC_015977:3215770:322357532235753223982408Roseburia hominis A2-183 chromosome, complete genomeFur family transcriptional regulator, ferric uptake regulator1e-1375.1
NC_010336:996661:100262610026261003045420Francisella philomiragia subsp. philomiragia ATCC 25017, completeferric uptake regulation protein2e-1375.1
NC_007576:471500:478071478071478523453Lactobacillus sakei subsp. sakei 23K, complete genomePutative transcriptional regulator, Fur family2e-1374.3
NC_011071:1773847:179028617902861790693408Stenotrophomonas maltophilia R551-3, complete genomeferric uptake regulator, Fur family3e-1373.9
NC_016147:1672482:169268516926851693089405Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeFur family ferric uptake regulator4e-1373.6
NC_008510:995612:101641010164101016892483Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,FUR family transcriptional regulator4e-1373.6
NC_005090:1921154:193897619389761939434459Wolinella succinogenes DSM 1740, complete genomeFERRIC UPTAKE REGULATION PROTEIN FERRIC UPTAKE REGULATOR4e-1373.6
NC_003919:1716831:175084917508491751259411Xanthomonas axonopodis pv. citri str. 306, complete genomeferric uptake regulator4e-1373.6
NC_014216:2860342:287913128791312879580450Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeferric uptake regulator, Fur family5e-1373.2
NC_019757:3563000:357692435769243577328405Cylindrospermum stagnale PCC 7417, complete genomeFe2+/Zn2+ uptake regulation protein7e-1372.8
NC_000853:1480478:151118415111841511594411Thermotoga maritima MSB8, complete genomeferric uptake regulation protein8e-1372.8
NC_014328:4073714:409536240953624095835474Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ferric uptake regulator1e-1272
NC_015975:441580:446518446518446976459Lactobacillus ruminis ATCC 27782 chromosome, complete genomeferric uptake regulation protein1e-1271.6
NC_016111:2651500:267271726727172673148432Streptomyces cattleya NRRL 8057, complete genomeIron uptake regulatory protein3e-1270.9
NC_016027:346768:353965353965354390426Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator3e-1270.9
NC_018720:1510084:151266515126651513108444Bifidobacterium asteroides PRL2011 chromosome, complete genomeferric uptake regulator, Fur family3e-1270.5
NC_014366:2826575:283941928394192839853435Gamma proteobacterium HdN1, complete genomeFerric-uptake regulator4e-1270.1
NC_015696:517941:523888523888524352465Francisella sp. TX077308 chromosome, complete genomeferric uptake regulation protein FUR5e-1270.1
NC_007677:3316540:334114833411483341690543Salinibacter ruber DSM 13855, complete genomeferric uptake regulation protein8e-1269.3
NC_007005:4992730:499528249952824995689408Pseudomonas syringae pv. syringae B728a, complete genomeFerric-uptake regulator9e-1268.9
NC_005773:4797242:479981247998124800315504Pseudomonas syringae pv. phaseolicola 1448A, complete genomeferric uptake regulation protein2e-1168.6
NC_015557:765500:780445780445780903459Hydrogenobaculum sp. 3684 chromosome, complete genomeferric uptake regulator, Fur family1e-1168.6
NC_011126:779500:794469794469794927459Hydrogenobaculum sp. Y04AAS1, complete genomeferric uptake regulator, Fur family1e-1168.6
NC_015587:765500:780500780500780958459Hydrogenobaculum sp. SHO chromosome, complete genomeferric uptake regulator, Fur family1e-1168.6
NC_020411:765500:780472780472780930459Hydrogenobaculum sp. HO, complete genomeferric uptake regulator, Fur family1e-1168.6
NC_010677:96470:102363102363102785423Francisella tularensis subsp. mediasiatica FSC147, complete genomeferric uptake regulation protein1e-1168.6
NC_006570:24636:305293052930951423Francisella tularensis subsp. tularensis Schu 4, complete genomeferric uptake regulation protein1e-1168.6
NC_008245:24652:305453054530967423Francisella tularensis subsp. tularensis FSC 198, complete genomeferric uptake regulation protein1e-1168.6
NC_009257:109528:115423115423115845423Francisella tularensis subsp. tularensis WY96-3418 chromosome,ferric uptake regulation protein1e-1168.6
NC_016933:24654:305473054730969423Francisella tularensis TIGB03 chromosome, complete genomeFerric uptake regulation protein FUR1e-1168.6
NC_016937:24654:305473054730969423Francisella tularensis subsp. tularensis TI0902 chromosome,Ferric uptake regulation protein FUR1e-1168.6
NC_010296:5278081:529809452980945298477384Microcystis aeruginosa NIES-843, complete genomeferric uptake regulation protein1e-1168.6
NC_017192:1137724:113864111386411139045405Arcobacter sp. L, complete genomeperoxide stress regulator2e-1168.2
NC_007777:75885:771997719977627429Frankia sp. CcI3, complete genomeferric uptake regulator, FUR family4e-1167
NC_014246:1730000:174166417416641742089426Mobiluncus curtisii ATCC 43063 chromosome, complete genomeFur family transcriptional regulator7e-1166.2
NC_008820:2595500:259631125963112596715405Prochlorococcus marinus str. MIT 9303, complete genomeFerric uptake regulator family protein2e-1064.7
NC_016001:905164:927594927594928046453Flavobacterium branchiophilum, complete genomeferric iron uptake transcription regulator, Fur2e-1064.3
NC_015387:261799:280726280726281121396Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeferric uptake regulator, Fur family3e-1064.3
NC_013510:2288746:229245522924552292868414Thermomonospora curvata DSM 43183, complete genomeferric uptake regulator, Fur family7e-1062.8
NC_014836:2848000:286175128617512862212462Desulfurispirillum indicum S5 chromosome, complete genomeferric-uptake regulator1e-0962
NC_021150:68251:858698586986354486Azotobacter vinelandii CA6, complete genomezinc uptake transcriptional regulator, Fur family2e-0961.2
NC_012560:68251:858698586986354486Azotobacter vinelandii DJ, complete genomezinc uptake transcriptional regulator, Fur family2e-0961.2
NC_019904:5526000:553969555396955540162468Echinicola vietnamensis DSM 17526 chromosome, complete genomeFe2+/Zn2+ uptake regulation protein2e-0961.2
NC_019745:3066177:306617730661773066620444Gloeocapsa sp. PCC 7428, complete genomeferric uptake regulator, Fur family3e-0960.8
NC_015737:143428:145598145598146020423Clostridium sp. SY8519, complete genomeFe2+/Zn2+ uptake regulation protein4e-0960.5
NC_015914:3317029:331930733193073319795489Cyclobacterium marinum DSM 745 chromosome, complete genomeFur family ferric uptake regulator5e-0960.1
NC_007516:2383097:238269023826902383100411Synechococcus sp. CC9605, complete genomeputative ferric uptake regulator, FUR family8e-0959.3
NC_005070:2308363:231005023100502310454405Synechococcus sp. WH 8102, complete genomeFerric uptake regulator family1e-0858.9
NC_015589:366296:380204380204380635432Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeferric-uptake regulator2e-0857.8
NC_015161:36668:540785407854461384Deinococcus proteolyticus MRP chromosome, complete genomeferric uptake regulator, Fur family3e-0857.4
NC_010617:558954:577184577184577627444Kocuria rhizophila DC2201, complete genomeFur family transcriptional regulator5e-0856.6
NC_011653:1574415:159227515922751592685411Thermosipho africanus TCF52B, complete genomeiron uptake regulatory protein7e-0856.2
NC_016906:839406:840702840702841172471Gordonia polyisoprenivorans VH2 chromosome, complete genomeferric-uptake regulator8e-0856.2
NC_014721:434501:438500438500438922423Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeferric uptake regulator, fur family3e-0754.3
NC_013947:1956923:197105919710591971478420Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeferric uptake regulator, Fur family3e-0754.3
NC_015380:303215:320127320127320570444Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomeferric uptake regulation protein FUR2e-0754.3
NC_009380:2310000:232434523243452324950606Salinispora tropica CNB-440 chromosome, complete genomeferric-uptake regulator4e-0753.9
NC_011726:1911500:193356819335681934011444Cyanothece sp. PCC 8801, complete genomeferric uptake regulator, Fur family6e-0753.1
NC_013161:1878700:190339519033951903838444Cyanothece sp. PCC 8802, complete genomeferric uptake regulator, Fur family6e-0753.1
NC_010831:173499:192015192015192473459Chlorobium phaeobacteroides BS1, complete genomeferric uptake regulator, Fur family1e-0652.4
NC_015389:1782825:178282517828251783262438Coriobacterium glomerans PW2 chromosome, complete genomeFe2+/Zn2+ uptake regulation protein1e-0652
NC_013961:3413011:343379934337993434308510Erwinia amylovora, complete genomePeroxide operon regulator2e-0651.2
NC_013971:335247:337074337074337583510Erwinia amylovora ATCC 49946 chromosome, complete genomezinc uptake regulation protein2e-0651.2
NC_006361:3132000:313261931326193133059441Nocardia farcinica IFM 10152, complete genomeputative ferric uptake regulator3e-0650.8
NC_015186:2931000:295191129519112952381471Acidiphilium multivorum AIU301, complete genomeFur family transcriptional regulator4e-0650.4
NC_015913:1248000:125185212518521252280429Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeferric uptake regulation protein4e-0650.4
NC_014633:681198:702806702806703219414Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceferric uptake regulator, Fur family7e-0649.7