Pre_GI Gene

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Host: NC_018870 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_018870:1506918 Thermacetogenium phaeum DSM 12270 chromosome, complete genome

Host Lineage: Thermacetogenium phaeum; Thermacetogenium; Thermoanaerobacteraceae; Thermoanaerobacterales; Firmicutes; Bacteria

General Information: Nitrogen fixation. Thermophilic strictly anaerobic bacterium oxidizing acetate to CO2 in syntrophic association with a methanogenic partner. Capable of growing with various substrates such as alcohols and methylated nitrogen compounds, and to reduce sulfate in the presence of acetate. Isolated from sludge of an anaerobic digester run at 58 degrees C. Thermacetogenium phaeum is a strictly anaerobic, homoacetogenic bacterium. It is exceptional because it can use the homoacetogenic Wood-Ljungdahl (CO- dehydrogenase) pathway both for acetate formation and acetate oxidation. Acetate oxidation is possible only in syntrophic cooperation with a methanogenic partner which maintains a low hydrogen and/or formate concentration in the coculture. With this, the bacterium operates close to the thermodynamic equilibrium of substrate conversion, similar to other syntrophically fermenting bacteria such as Syntrophomonas wolfei the genomes of which have been sequenced as well in the recent past.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15062871506928642NADH-quinone oxidoreductase subunit G 2QuickGO ontologyBLASTP
150691815088401923NADH-quinone oxidoreductase 51 kDa subunit FQuickGO ontologyBLASTP
15088371509388552NADH dehydrogenase ubiquinone flavoprotein 2QuickGO ontologyBLASTP
15093691510310942AAA type ATPaseQuickGO ontologyBLASTP
15103141510574261hypothetical protein
151057415113627895-nucleotidase SurEQuickGO ontologyBLASTP
15114831512046564GTP cyclohydrolase 1QuickGO ontologyBLASTP
15122101513196987TPR_2 repeat domain-containing proteinQuickGO ontologyBLASTP
15133891513829441ferric uptake regulation protein FurQuickGO ontologyBLASTP
15138501514794945response regulator receiver modulated diguanylate cyclaseQuickGO ontologyBLASTP
15149471515327381hypothetical protein
15154871516149663hypothetical proteinBLASTP
1516333151640775tRNA-ArgQuickGO ontology
15164161517306891v-SNARE-like vesicle transport proteinQuickGO ontology
15174901517660171hypothetical proteinBLASTP
151768215187881107histidinol-phosphate aminotransferase HisCQuickGO ontologyBLASTP
15188751519699825spermidine synthase SpeEQuickGO ontologyBLASTP
15197161520501786IstB-like ATP-binding proteinQuickGO ontologyBLASTP
15205291521290762DnaDDnaB domain-containing replication proteinQuickGO ontologyBLASTP
15214471522268822hypothetical protein
152229015235011212aminotransferase YugHQuickGO ontologyBLASTP
15237721524419648hypothetical protein
152453715255501014FAD-dependent pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP
15255771526518942510-methylenetetrahydrofolate reductaseQuickGO ontologyBLASTP
15265051527176672hypothetical proteinBLASTP
152717315291431971CoB--CoM heterodisulfide reductase-like proteinQuickGO ontologyBLASTP