Pre_GI: BLASTP Hits

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Query: NC_008593:1060548:1081779 Clostridium novyi NT, complete genome

Start: 1081779, End: 1082039, Length: 261

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:1207314:121321712132171213492276Clostridium botulinum BKT015925 chromosome, complete genomeflagellin synthesis regulator FlgM1e-23108
NC_021182:2921000:293644429364442936731288Clostridium pasteurianum BC1, complete genomeflagellar biosynthesis anti-sigma factor FlgM9e-1165.5
NC_009698:2727203:274314227431422743423282Clostridium botulinum A str. Hall chromosome, complete genomeregulator of flagellin synthesis FlgM8e-1062.4
NC_009697:2790277:280621628062162806497282Clostridium botulinum A str. ATCC 19397 chromosome, completeregulator of flagellin synthesis FlgM8e-1062.4
NC_009495:2876865:289280428928042893085282Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeregulator of flagellin synthesis FlgM8e-1062.4
NC_010516:2900057:291185729118572912138282Clostridium botulinum B1 str. Okra, complete genomeregulator of flagellin synthesis FlgM8e-1062.4
NC_010520:2937981:295221329522132952494282Clostridium botulinum A3 str. Loch Maree, complete genomeregulator of flagellin synthesis FlgM8e-1062.4
NC_012563:3090954:310689331068933107174282Clostridium botulinum A2 str. Kyoto, complete genomeregulator of flagellin synthesis FlgM8e-1062.4
NC_017179:281069:301504301504301779276Clostridium difficile BI1, complete genomenegative regulator of flagellin synthesis4e-0960.1
NC_009699:2901497:291639129163912916672282Clostridium botulinum F str. Langeland chromosome, complete genomeregulator of flagellin synthesis FlgM4e-0960.1
NC_017297:2905138:291652929165292916810282Clostridium botulinum F str. 230613 chromosome, complete genomeregulator of flagellin synthesis FlgM4e-0960.1
NC_014328:1046958:106007210600721060344273Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenegative regulator of flagellin synthesis8e-0959.3
NC_012658:2930244:294437829443782944659282Clostridium botulinum Ba4 str. 657 chromosome, complete genomeregulator of flagellin synthesis FlgM2e-0858.2
NC_010723:801215:802725802725803003279Clostridium botulinum E3 str. Alaska E43, complete genomenegative regulator of flagellin synthesis3e-0754.3
NC_017295:2286911:230497623049762305257282Clostridium acetobutylicum EA 2018 chromosome, complete genomeRegulator of flagellin synthesis, FLGM1e-0652
NC_020291:4944835:499289249928924993167276Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeanti-sigma-28 factor, FlgM family2e-0650.8
NC_016047:3599095:359959235995923599858267Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeAnti-sigma-28 factor, FlgM5e-0650.1
NC_018664:239000:246865246865247155291Clostridium acidurici 9a chromosome, complete genomenegative regulator of flagellin synthesis, anti-sigma-28 factor FlgM7e-0649.3