Pre_GI: BLASTP Hits

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Query: NC_008345:4107847:4114890 Shewanella frigidimarina NCIMB 400, complete genome

Start: 4114890, End: 4115498, Length: 609

Host Lineage: Shewanella frigidimarina; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from the North Sea near Aberdeen, United Kingdom. Iron-reducing marine bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella frigidimarina is an iron-reducing marine bacterium. This organism have been isolated from seawater, sea ice, and marine algae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016614:1543333:1543333154333315448051473Vibrio sp. EJY3 chromosome 2, complete sequenceRNA-directed DNA polymerase4e-111400
NC_016901:2916988:2921351292135129228651515Shewanella baltica OS678 chromosome, complete genomeRNA-directed DNA polymerase7e-107385
NC_009997:2967521:2971884297188429733561473Shewanella baltica OS195, complete genomeRNA-directed DNA polymerase7e-107385
NC_009831:3092126:3109232310923231107041473Shewanella sediminis HAW-EB3, complete genomeRNA-directed DNA polymerase7e-88322
NC_009052:2683447:2699890269989027013621473Shewanella baltica OS155, complete genomeRNA-directed DNA polymerase1e-87322
NC_007512:2024880:2031253203125320327401488Pelodictyon luteolum DSM 273, complete genomeRNA-directed DNA polymerase5e-47187
NC_014394:993465:1006372100637210080421671Gallionella capsiferriformans ES-2 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)7e-46183
NC_009614:4201098:4214682421468242163371656Bacteroides vulgatus ATCC 8482 chromosome, complete genomereverse transcriptase1e-44179
NC_009614:2723262:2750847275084727525021656Bacteroides vulgatus ATCC 8482 chromosome, complete genomereverse transcriptase2e-44178
NC_004663:2859158:2871211287121128728691659Bacteroides thetaiotaomicron VPI-5482, complete genomeputative reverse transcriptase2e-43175
NC_009434:3611738:3671821367182136733261506Pseudomonas stutzeri A1501, complete genomegroup II intron-encoding maturase5e-43173
NC_009434:695582:7563407563407578451506Pseudomonas stutzeri A1501, complete genomeputative reverse transcriptase-maturase-transposase5e-43173
NC_018080:5091772:5143572514357251452901719Pseudomonas aeruginosa DK2 chromosome, complete genomereverse transcriptase1e-42172
NC_010627:233572:2353602353602368711512Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceRNA-directed DNA polymerase3e-42171
NC_010170:1103224:1122690112269011244081719Bordetella petrii, complete genomereverse transcriptase6e-41166
NC_010170:4533416:4554103455410345558211719Bordetella petrii, complete genomereverse transcriptase6e-41166
NC_011059:670345:6821856821856836721488Prosthecochloris aestuarii DSM 271, complete genome9e-41166
NC_008782:1483155:1491219149121914926341416Acidovorax sp. JS42, complete genome2e-40165
NC_020054:943945:9492149492149509291716Fibrella aestuarina BUZ 2 drat genomereverse transcriptase3e-40164
NC_008322:641197:6470116470116486601650Shewanella sp. MR-7, complete genomeRNA-directed DNA polymerase7e-40163
NC_012781:700226:7309837309837326471665Eubacterium rectale ATCC 33656, complete genomeRNA-directed DNA polymerase2e-39161
NC_012781:2552723:2566112256611225677761665Eubacterium rectale ATCC 33656, complete genomeRNA-directed DNA polymerase2e-39161
NC_007414:56508:5884958849605731725Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein4e-39160
NC_002128:35000:3627436274379981725Escherichia coli O157:H7 str. Sakai plasmid pO157, completereverse transcriptase4e-39160
NC_011059:670345:6889086889086903801473Prosthecochloris aestuarii DSM 271, complete genomeRNA-directed DNA polymerase1e-38159
NC_015942:3147514:3152957315295731546481692Acidithiobacillus ferrivorans SS3 chromosome, complete genomeRNA-directed DNA polymerase2e-38158
NC_015600:1161640:1166985116698511686431659Streptococcus pasteurianus ATCC 43144, complete genomereverse transcriptase5e-38157
NC_008463:632869:6405816405816422661686Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative reverse transcriptase2e-37155
NC_012560:2451500:2457641245764124591581518Azotobacter vinelandii DJ, complete genomeRNA-directed DNA polymerase8e-37153
NC_021150:2451500:2457653245765324591701518Azotobacter vinelandii CA6, complete genomeRNA-directed DNA polymerase8e-37153
NC_010170:4533416:4549438454943845511531716Bordetella petrii, complete genomereverse transcriptase2e-36151
NC_009614:2723262:2745951274595127476061656Bacteroides vulgatus ATCC 8482 chromosome, complete genomereverse transcriptase2e-35149
NC_019968:1084288:111226911122691113018750Prevotella dentalis DSM 3688 chromosome 2, complete sequence5e-32137
NC_003552:3479000:348958634895863490149564Methanosarcina acetivorans C2A, complete genome4e-31134
NC_016109:4753493:4770979477097947727091731Kitasatospora setae KM-6054, complete genomeputative group II intron-encoded protein4e-31134
NC_008312:7255094:7261363726136372626761314Trichodesmium erythraeum IMS101, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-30132
NC_014973:2425994:2435812243581224373501539Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase6e-30130
NC_007796:2387002:2411009241100924124811473Methanospirillum hungatei JF-1, complete genomeRNA-directed DNA polymerase2e-29128
NC_007796:3379614:3397846339784633993091464Methanospirillum hungatei JF-1, complete genomeRNA-directed DNA polymerase2e-29128
NC_018867:1303287:1303287130328713042881002Dehalobacter sp. CF chromosome, complete genomeRetron-type reverse transcriptase3e-27121
NC_018866:1224748:1224748122474812257491002Dehalobacter sp. DCA chromosome, complete genomeRetron-type reverse transcriptase3e-27121
NC_014023:24000:4529445294469431650Bacillus megaterium QM B1551 plasmid pBM700, complete sequencereverse transcriptase/endonuclease protein5e-26117
NC_003901:3207154:3207154320715432086531500Methanosarcina mazei Go1, complete genomereverse transcriptase3e-25114
NC_003901:3207154:322300532230053223757753Methanosarcina mazei Go1, complete genomereverse transcriptase5e-25114
NC_019748:42358:5390553905557521848Stanieria cyanosphaera PCC 7437, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-23108
NC_021182:4829000:4837801483780148395821782Clostridium pasteurianum BC1, complete genomeRetron-type reverse transcriptase1e-22106
NC_008312:666287:6758496758496776181770Trichodesmium erythraeum IMS101, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-22106
NC_019748:42358:5045350453522191767Stanieria cyanosphaera PCC 7437, complete genomeRNA-directed DNA polymerase2e-22105
NC_007322:1:6678667884861809Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, completereverse transcriptase/endonuclease protein, (pxo1-07)2e-21102
NC_014331:1:6728672885361809Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, completereverse transcriptase/endonuclease protein2e-21102
NC_012579:1:6903690387111809Bacillus anthracis str. CDC 684 plasmid pX01, complete sequencereverse transcriptase/endonuclease protein2e-21102
NC_012656:1:6942694287501809Bacillus anthracis str. A0248 plasmid pXO1, complete sequencereverse transcriptase/endonuclease protein2e-21102
NC_008312:5579819:5587676558767655893401665Trichodesmium erythraeum IMS101, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-21100
NC_010418:70000:8046280462822851824Clostridium botulinum A3 str. Loch Maree plasmid pCLK, completereverse transcriptase/endonuclease protein2e-2098.6
NC_012751:1071589:1073875107387510755571683Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completegroup II intron encoded reverse transcriptase2e-1995.9
NC_012751:594851:6102356102356119171683Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completegroup II intron encoded reverse transcriptase2e-1995.9
NC_012751:942315:9744789744789761601683Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completegroup II intron encoded reverse transcriptase2e-1995.9
NC_012751:1296877:1304601130460113062831683Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completegroup II intron encoded reverse transcriptase2e-1995.9
NC_011973:120500:1253781253781271891812Bacillus cereus Q1 plasmid pBc239, complete sequenceputative reverse transcriptase2e-1995.5
NC_011726:1456585:1464222146422214660451824Cyanothece sp. PCC 8801, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1994.4
NC_011726:1456585:1466831146683114686541824Cyanothece sp. PCC 8801, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1994.4
NC_011726:3051408:3059473305947330612961824Cyanothece sp. PCC 8801, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1994.4
NC_011726:3051408:3062082306208230639051824Cyanothece sp. PCC 8801, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1994.4
NC_015656:1947810:1957176195717619586121437Frankia symbiont of Datisca glomerata chromosome, complete genomeRNA-directed DNA polymerase5e-1890.9
NC_012751:1190206:1199314119931412007591446Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete2e-1789
NC_003552:3479000:349229534922953492816522Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-1789
NC_010546:4923496:4931435493143549333001866Cyanothece sp. ATCC 51142 chromosome circular, complete sequencereverse transcriptase3e-1685.1
NC_013131:4525075:4539041453904145404921452Catenulispora acidiphila DSM 44928, complete genomeRNA-directed DNA polymerase1e-1479.3
NC_004116:560893:5693965693965707151320Streptococcus agalactiae 2603V/R, complete genomeprophage LambdaSa1, reverse transcriptase/maturase family protein2e-1375.5
NC_012751:942315:9762379762379774211185Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completegroup II intron encoded reverse transcriptase1e-1273.2
NC_008312:7255094:7258754725875472601031350Trichodesmium erythraeum IMS101, complete genomeGroup II intron, maturase-specific2e-1272
NC_008312:666287:6807926807926823001509Trichodesmium erythraeum IMS101, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-1270.5
NC_019697:1696000:1702918170291817045821665Chamaesiphon minutus PCC 6605, complete genomeRetron-type reverse transcriptase8e-1270.5
NC_014355:2775979:277734227773422778103762Candidatus Nitrospira defluvii, complete genomeputative reverse transcriptase (fragment)5e-1167.8
NC_009380:4702815:4707627470762747090931467Salinispora tropica CNB-440 chromosome, complete genomeRNA-directed DNA polymerase7e-1167
NC_021184:148000:166185166185166751567Desulfotomaculum gibsoniae DSM 7213, complete genome9e-1063.5
NC_004741:3041294:306476030647603065593834Shigella flexneri 2a str. 2457T, complete genomereverse transcriptase-like protein8e-0960.5
NC_021182:1761789:176381317638131764370558Clostridium pasteurianum BC1, complete genome7e-0960.5
NC_004337:3049118:3072584307258430740921509Shigella flexneri 2a str. 301, complete genomereverse transcriptase-like protein1e-0860.1
NC_007941:11319:3112031120326281509Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein1e-0860.1
NC_017328:3088907:3112372311237231136461275Shigella flexneri 2002017 chromosome, complete genomeReverse transcriptase-like protein9e-0960.1
CU928145:3360967:3366116336611633676391524Escherichia coli 55989 chromosome, complete genomeputative reverse transcriptase-like protein from putative prophage or plasmid9e-0960.1
NC_011748:3360967:3366116336611633676391524Escherichia coli 55989, complete genomeputative reverse transcriptase-like protein from putative prophage or plasmid9e-0960.1
NC_011750:919953:9200439200439215661524Escherichia coli IAI39 chromosome, complete genomeGroup II intron-encoded reverse transcriptase/maturase9e-0960.1
NC_011750:1565000:1584678158467815862011524Escherichia coli IAI39 chromosome, complete genomeGroup II intron-encoded reverse transcriptase/maturase9e-0960.1
NC_011750:1094000:1094818109481810963411524Escherichia coli IAI39 chromosome, complete genomeGroup II intron-encoded reverse transcriptase/maturase9e-0960.1
NC_011750:3545466:3557374355737435588971524Escherichia coli IAI39 chromosome, complete genomeGroup II intron-encoded reverse transcriptase/maturase9e-0960.1
NC_017328:1075535:1091646109164610931691524Shigella flexneri 2002017 chromosome, complete genomeReverse transcriptase-like protein9e-0960.1
NC_010981:242500:2849612849612863041344Wolbachia pipientis, complete genomeputative reverse transcriptase8e-0960.1
NC_003276:252217:2612922612922626201329Nostoc sp. PCC 7120 plasmid pCC7120alpha, complete sequencehypothetical protein3e-0858.5
NC_014973:4630132:4644655464465546461811527Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase2e-0755.8
NC_019772:169269:2073892073892089601572Anabaena cylindrica PCC 7122 plasmid pANACY.01, complete sequenceRNA-directed DNA polymerase (Reverse transcriptase)2e-0755.5
NC_009953:2281349:229202622920262292928903Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein6e-0753.9
NC_003276:252217:2596462596462613341689Nostoc sp. PCC 7120 plasmid pCC7120alpha, complete sequencehypothetical protein9e-0753.5
NC_012660:2143376:217602021760202176169150Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0653.5
NC_017044:702483:711603711603711968366Rickettsia parkeri str. Portsmouth chromosome, complete genomereverse transcriptase2e-0652.8
NC_008576:2458573:2464162246416224654631302Magnetococcus sp. MC-1, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0652.4
NC_014829:1526401:1533531153353115348561326Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0651.6
NC_010718:1959517:1966127196612719673951269Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0651.6
NC_010718:2513917:2535266253526625365341269Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0651.6
NC_019978:1477724:1479685147968514809741290Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase8e-0650.4
NC_019978:1477724:1477724147772414790131290Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase9e-0650.1
NC_009454:2502724:2519632251963225209181287Pelotomaculum thermopropionicum SI, complete genomeretron-type reverse transcriptase1e-0550.1