Pre_GI Gene

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Host: NC_008312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008312:666287 Trichodesmium erythraeum IMS101, complete genome

Host Lineage: Trichodesmium erythraeum; Trichodesmium; ; Oscillatoriales; Cyanobacteria; Bacteria

General Information: Trichodesmium erythraeum strain IMS101 was isolated from the North Carolina coast in 1992 and grows in straight filaments. Filamentous marine cyanobacterium. This filamentous marine cyanobacterium is a nitrogen-fixing organism that contribues a significant amount of the global fixed nitrogen each year. These bacteria are unusual in that nitrogen fixation takes place in a differentiated cell called the diazocyte which is different from the nitrogen-fixing differentiated cell (heterocyst) found in other cyanobacteria. The diazocyte is developed in order to protect the oxygen-sensitive nitrogenases and includes a number of changes including production of more membranes and down-regulation of photosynthetic activity during times of peak nitrogen fixation (noontime). This organism gives the Red Sea its name when large blooms appear and is one of the organisms most often associated with large blooms in marine waters.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6662876693403054Hemolysin-type calcium-binding regionQuickGO ontologyBLASTP
6696426755995958Protein splicing siteQuickGO ontologyBLASTP
6758496776181770RNA-directed DNA polymerase Reverse transcriptaseQuickGO ontologyBLASTP
677883678125243hypothetical proteinBLASTP
678196678477282RP ribonucleotide reductase-likeQuickGO ontologyBLASTP
679466679681216hypothetical proteinBLASTP
679909680187279hypothetical proteinBLASTP
6807926823001509RNA-directed DNA polymerase Reverse transcriptaseQuickGO ontologyBLASTP
682941683198258protein splicing siteQuickGO ontologyBLASTP
6839166849921077binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
685183685695513adenine phosphoribosyltransferaseQuickGO ontologyBLASTP
687517688122606hypothetical proteinBLASTP
6889506905721623peptidase S15QuickGO ontologyBLASTP
690731691150420transposaseQuickGO ontologyBLASTP
691235691768534transposaseQuickGO ontologyBLASTP
692630693079450Cupin 2 conserved barrelQuickGO ontologyBLASTP