Pre_GI: BLASTP Hits

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Query: NC_008149:4053363:4064106 Yersinia pestis Nepal516, complete genome

Start: 4064106, End: 4064513, Length: 408

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:4265659:426821842682184268625408Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transcriptional regulator1e-73274
NC_005810:4469156:448001144800114480499489Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulatory protein1e-73274
NC_004088:266543:277204277204277692489Yersinia pestis KIM, complete genometranscriptional repressor1e-73274
NC_003143:4006884:402561340256134026020408Yersinia pestis CO92, complete genomeputative transcriptional regulatory protein1e-73274
NC_006155:4302826:430538543053854305792408Yersinia pseudotuberculosis IP 32953, complete genomeputative transcriptional regulatory protein1e-73274
NC_009381:222735:241443241443241850408Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulatory protein1e-73274
NC_014029:3958811:397754039775403977947408Yersinia pestis Z176003 chromosome, complete genomeputative transcriptional regulatory protein1e-73274
NC_017154:3898925:391765439176543918061408Yersinia pestis D106004 chromosome, complete genometranscriptional regulator1e-73274
NC_017160:4073611:408435440843544084761408Yersinia pestis D182038 chromosome, complete genometranscriptional regulator1e-73274
NC_017168:1631052:164978116497811650188408Yersinia pestis A1122 chromosome, complete genomeputative transcriptional regulator1e-73274
NC_012214:1267589:127161312716131272011399Erwinia pyrifoliae Ep1/96, complete genomePutative phage regulatory protein6e-1166.2
NC_013892:1272448:128399912839991284364366Xenorhabdus bovienii SS-2004 chromosome, complete genomeDNA-binding protein1e-1065.5
NC_002505:1550108:156602715660271566365339Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional repressor RstR2e-1064.7
NC_002505:1550108:157294315729431573281339Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional repressor RstR2e-1064.7
NC_016445:1027143:104721810472181047556339Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional repressor RstR2e-1064.7
NC_016445:1027143:104994310499431050281339Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional repressor RstR2e-1064.7
NC_016944:1547176:156305615630561563394339Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional repressor RstR2e-1064.7
NC_016944:1547176:156996915699691570307339Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional repressor RstR2e-1064.7
NC_014306:1981956:200126420012642001389126Erwinia billingiae Eb661, complete genome3e-1063.9
NC_004129:195347:205065205065205427363Pseudomonas fluorescens Pf-5, complete genomeDNA-binding protein, putative4e-1063.5
NC_015144:900000:908808908808909149342Weeksella virosa DSM 16922 chromosome, complete genomehelix-turn-helix domain protein1e-0858.5
NC_020272:2692746:269463426946342694972339Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator6e-0856.2
NC_014228:2883500:289875728987572899128372Xenorhabdus nematophila ATCC 19061, complete genomeputative Cryptic phage CTXphi transcriptional repressor rstR1e-0755.1
NC_014228:2883500:289160828916082891979372Xenorhabdus nematophila ATCC 19061, complete genomeputative Cryptic phage CTXphi transcriptional repressor rstR1e-0755.1
NC_011660:2924397:292631729263172926793477Listeria monocytogenes HCC23 chromosome, complete genomegp331e-0755.1
NC_014964:35862:358623586236251390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein1e-0755.1
NC_010321:35855:358553585536244390Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeXRE family transcriptional regulator1e-0755.1
NC_019896:1989997:200906620090662009404339Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completetranscription regulator YobD2e-0754.3
NC_014551:576000:577723577723578103381Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein3e-0754.3
NC_014364:2693840:270089127008912701232342Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, XRE family3e-0754.3
NC_014364:2322269:233682923368292337170342Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, XRE family3e-0753.9
NC_021175:2063611:207187220718722072216345Streptococcus oligofermentans AS 1.3089, complete genomeCro/CI family transcriptional regulator4e-0753.5
NC_005126:1265071:130947513094751309813339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0753.5
NC_005126:4333767:435394543539454354283339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0753.5
NC_005126:1613818:162726016272601627598339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0753.5
NC_005126:4333767:434657743465774346915339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0753.5
NC_013421:385930:393473393473393742270Pectobacterium wasabiae WPP163, complete genomehypothetical protein5e-0753.1
NC_017195:2027430:204155520415552041794240Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completehypothetical protein5e-0753.1
NC_014976:684000:685892685892686242351Bacillus subtilis BSn5 chromosome, complete genomeputative Xre family transcriptional regulator6e-0752.8
NC_015975:923812:941399941399941818420Lactobacillus ruminis ATCC 27782 chromosome, complete genomehypothetical protein7e-0752.8
NC_000964:2049899:205548820554882055826339Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0651.2
NC_011830:720756:734271734271734603333Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, XRE family2e-0651.2
NC_009706:1972000:199149419914941992135642Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein3e-0650.4
NC_016048:751000:769269769269769643375Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein6e-0649.7
NC_005126:4333767:437298043729804373342363Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein6e-0649.7
NC_005126:4333767:436409043640904364452363Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein6e-0649.7
NC_015660:1076159:108793410879341088275342Geobacillus thermoglucosidasius C56-YS93 chromosome, completehelix-turn-helix domain-containing protein8e-0649.3
NC_016048:3063888:309691430969143097129216Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein8e-0649.3
NC_007644:280000:287262287262287648387Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, XRE family8e-0649.3
NC_017208:694500:696523696523696867345Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscriptional regulator1e-0548.9