Pre_GI: BLASTP Hits

Some Help

Query: NC_008146:1016446:1039920 Mycobacterium sp. MCS, complete genome

Start: 1039920, End: 1040783, Length: 864

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:1022252:104565410456541046427774Mycobacterium sp. KMS, complete genomemethyltransferase FkbM family3e-148524
NC_008726:1776192:178661417866141787081468Mycobacterium vanbaalenii PYR-1, complete genome6e-42171
NC_007484:1671835:168403416840341684747714Nitrosococcus oceani ATCC 19707, complete genomeMethyltransferase FkbM4e-36152
NC_011901:2202690:222057222205722221300729Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completemethyltransferase FkbM1e-32140
NC_009565:1688642:170969517096951710426732Mycobacterium tuberculosis F11, complete genomehypothetical protein3e-1685.9
NC_002755:1684161:170521317052131705944732Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein3e-1685.9
NC_000962:1684005:170505817050581705789732Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein3e-1685.9
NC_009525:1685522:170657517065751707306732Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein3e-1685.9
NC_012943:2707677:270767727076772708408732Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein3e-1685.9
NC_016768:2704350:270435027043502705081732Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein3e-1685.9
NC_017026:1686500:170609317060931706824732Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein3e-1685.9
NC_015848:1708176:172923317292331729967735Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein1e-1583.6
NC_019950:1689910:170981817098181710552735Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein1e-1583.6
NC_002944:1285436:129571912957191296441723Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein9e-1580.9
NC_016604:297687:314531314531315271741Mycobacterium rhodesiae NBB3 chromosome, complete genomeFkbM family methyltransferase5e-1478.6
NC_010475:1161000:117416311741631174906744Synechococcus sp. PCC 7002, complete genomemethyltransferase, FkbM family protein9e-1477.8
NC_015848:3343731:336528933652893366020732Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein8e-1477.8
NC_009565:3299937:332014133201413320872732Mycobacterium tuberculosis F11, complete genomehypothetical protein8e-1477.8
NC_000962:3288464:330866833086683309399732Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein8e-1477.8
NC_019950:3306419:332959833295983330329732Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein8e-1477.8
NC_009525:3300456:332066033206603321391732Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein8e-1477.8
NC_002755:3282785:330298833029883303719732Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein8e-1477.8
NC_017026:3282405:330261333026133303344732Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein8e-1477.8
NC_008769:3242453:326282932628293263560732Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein1e-1377
NC_002945:3246278:326535632653563266087732Mycobacterium bovis AF2122/97, complete genomehypothetical protein1e-1377
NC_012207:3237440:325565632556563256387732Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein1e-1377
NC_016804:3221818:324219432421943242925732Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein1e-1377
NC_011901:2202690:223037822303782231085708Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein2e-1273.2
NC_000911:2777447:2781403278140327844473045Synechocystis sp. PCC 6803, complete genomehypothetical protein7e-1168.2
NC_017039:2775275:2779231277923127822753045Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein7e-1168.2
NC_017052:2775263:2779219277921927822633045Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein7e-1168.2
NC_017277:2776264:2780220278022027832643045Synechocystis sp. PCC 6803, complete genomehypothetical protein7e-1168.2
NC_000914:135534:151051151051151782732Rhizobium sp. NGR234 plasmid pNGR234a, complete sequenceNoeI1e-1067.4
NC_015572:1252000:129141412914141292145732Methylomonas methanica MC09 chromosome, complete genomemethyltransferase FkbM family2e-1067
NC_004463:2158116:222394722239472224594648Bradyrhizobium japonicum USDA 110, complete genomenodulation protein4e-1065.5
NC_017249:7993713:805491680549168055563648Bradyrhizobium japonicum USDA 6, complete genomenodulation protein4e-1065.5
NC_008312:3385930:3391278339127833927351458Trichodesmium erythraeum IMS101, complete genomemethyltransferase FkbM family4e-1065.5
NC_016147:1435000:143665014366501436949300Pseudoxanthomonas spadix BD-a59 chromosome, complete genomemethyltransferase FkbM2e-0963.2
NC_007508:2277640:228465422846542285406753Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein2e-0962.8
NC_015510:3641676:365094836509483651673726Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeFkbM family methyltransferase3e-0962.4
NC_008435:1215437:126814912681491268928780Rhodopseudomonas palustris BisA53, complete genomemethyltransferase FkbM family7e-0961.2
NC_008536:5861495:587940658794065880119714Solibacter usitatus Ellin6076, complete genomemethyltransferase FkbM family1e-0860.8
NC_012850:459315:470623470623471375753Rhizobium leguminosarum bv. trifolii WSM1325, complete genomemethyltransferase FkbM family1e-0860.8
NC_013851:2211120:222328922232892224056768Allochromatium vinosum DSM 180 chromosome, complete genomemethyltransferase FkbM family2e-0860.1
NC_015496:2279829:230194423019442302819876Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomemethyltransferase FkbM family2e-0859.7
NC_017271:2278500:228450422845042285256753Xanthomonas campestris pv. raphani 756C chromosome, completemethyltransferase, FkbM family protein5e-0858.5
NC_011884:732000:744734744734745693960Cyanothece sp. PCC 7425, complete genomemethyltransferase FkbM family6e-0858.5
NC_007406:2615916:262099026209902621793804Nitrobacter winogradskyi Nb-255, complete genomemethyltransferase FkbM7e-0858.2
NC_016629:1111619:113694311369431137827885Desulfovibrio africanus str. Walvis Bay chromosome, completeFkbM family methyltransferase3e-0756.2
NC_011979:1590432:162393916239391624676738Geobacter sp. FRC-32, complete genomemethyltransferase FkbM family4e-0755.5
NC_011666:3001513:300842730084273009224798Methylocella silvestris BL2, complete genomemethyltransferase FkbM family4e-0755.5
NC_019940:1059000:1067209106720910682131005Thioflavicoccus mobilis 8321 chromosome, complete genomeFkbM family methyltransferase7e-0754.7
NC_005027:1304887:130488713048871305777891Rhodopirellula baltica SH 1, complete genomeconserved hypothetical protein-putative methyltransferase7e-0754.7
NC_009937:3324793:333558033355803336365786Azorhizobium caulinodans ORS 571, complete genomemethyltransferase2e-0653.5
NC_015666:1623790:164442316444231645262840Halopiger xanaduensis SH-6 chromosome, complete genomeFkbM family methyltransferase4e-0652.4
NC_010172:5036385:504295250429525043785834Methylobacterium extorquens PA1, complete genomemethyltransferase FkbM family5e-0652
NC_007519:2847816:287379828737982874655858Desulfovibrio alaskensis G20 chromosome, complete genomemethyltransferase FkbM7e-0651.6