Pre_GI: BLASTP Hits

Some Help

Query: NC_007952:3283394:3302307 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3302307, End: 3303254, Length: 948

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012792:385670:408949408949409914966Variovorax paradoxus S110 chromosome 2, complete genomePhthalate 4,5-dioxygenase2e-89329
NC_003296:262118:278338278338279291954Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE VANILLATE O-DEMETHYLASE (VANILLATE DEGRADATION FERREDOXIN-LIKE) OXIDOREDUCTASE PROTEIN2e-85315
NC_010501:3448389:345377834537783454731954Pseudomonas putida W619, complete genomeferredoxin2e-79296
NC_020209:1986503:200595520059552006908954Pseudomonas poae RE*1-1-14, complete genomeferredoxin3e-75281
NC_020209:1949500:197429119742911975250960Pseudomonas poae RE*1-1-14, complete genomeferredoxin2e-74279
NC_010170:1580832:159031115903111591288978Bordetella petrii, complete genomeVanillate O-demethylase oxidoreductase4e-73275
NC_007951:3655088:367691336769133677890978Burkholderia xenovorans LB400 chromosome 1, complete sequenceVanillate O-demethylase reductase subunit, VanB4e-73275
NC_011740:810411:819063819063819995933Escherichia fergusonii ATCC 35469, complete genomeVanillate O-demethylase oxidoreductase (Vanillate degradation ferredoxin-like protein)8e-72270
NC_007974:2097334:211653021165302117525996Ralstonia metallidurans CH34 chromosome 2, complete sequenceferredoxin9e-72270
NC_013209:2384826:239389423938942394853960Acetobacter pasteurianus IFO 3283-01, complete genomevanillate O-demethylase oxidoreductase subunit1e-67256
NC_017100:2383487:239510123951012396060960Acetobacter pasteurianus IFO 3283-03, complete genomevanillate O-demethylase oxidoreductase subunit1e-67256
NC_017108:2383370:239243823924382393397960Acetobacter pasteurianus IFO 3283-12, complete genomevanillate O-demethylase oxidoreductase subunit1e-67256
NC_017111:2383388:239245623924562393415960Acetobacter pasteurianus IFO 3283-32, complete genomevanillate O-demethylase oxidoreductase subunit1e-67256
NC_017121:2383375:239244323924432393402960Acetobacter pasteurianus IFO 3283-07, complete genomevanillate O-demethylase oxidoreductase subunit1e-67256
NC_017125:2383467:239508123950812396040960Acetobacter pasteurianus IFO 3283-22, complete genomevanillate O-demethylase oxidoreductase subunit1e-67256
NC_017146:2383509:239512323951232396082960Acetobacter pasteurianus IFO 3283-26, complete genomevanillate O-demethylase oxidoreductase subunit1e-67256
NC_017150:2290681:230164023016402302599960Acetobacter pasteurianus IFO 3283-01-42C, complete genomevanillate O-demethylase oxidoreductase subunit1e-67256
NC_010086:1907959:193564219356421936610969Burkholderia multivorans ATCC 17616 chromosome 2, completeferredoxin1e-60233
NC_010805:530876:538694538694539662969Burkholderia multivorans ATCC 17616 chromosome 2, completeFAD/NAD(P)-binding oxidoreductase1e-60233
NC_009255:1071868:107976710797671080735969Burkholderia vietnamiensis G4 chromosome 2, complete sequenceferredoxin1e-60233
NC_012997:1335902:133794813379481338916969Teredinibacter turnerae T7901, complete genomeputative vanillate O-demethylase oxidoreductase2e-59229
NC_015381:1705383:170778417077841708755972Burkholderia gladioli BSR3 chromosome 1, complete sequenceOxidoreductase1e-57223
NC_013446:1648556:167632916763291677291963Comamonas testosteroni CNB-2, complete genomeferredoxin3e-55215
NC_012856:2931995:295331529533152954277963Ralstonia pickettii 12D chromosome 1, complete genomeferredoxin1e-54213
NC_014306:3006028:303941730394173040385969Erwinia billingiae Eb661, complete genomevanillate O-demethylase oxidoreductase3e-54212
NC_014839:12519:203192031921281963Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceferredoxin5e-54211
NC_007953:314872:315695315695316645951Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative iron-sulfur oxidoreductase, beta subunit4e-53208
NC_020302:3014483:302435030243503025300951Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein3e-52205
NC_010801:238430:2384302384302407782349Burkholderia multivorans ATCC 17616 chromosome 3, completecytochrome P4501e-51203
NC_008043:615049:6183026183026215143213Silicibacter sp. TM1040 mega plasmid, complete sequenceReductive dehalogenase3e-50199
NC_021171:1661923:168394216839421684904963Bacillus sp. 1NLA3E, complete genomevanillate O-demethylase5e-50198
NC_013446:2062862:207993620799362080631696Comamonas testosteroni CNB-2, complete genomeferredoxin8e-50197
NC_016642:4517478:452257045225704523514945Pseudovibrio sp. FO-BEG1 chromosome, complete genomevanillate O-demethylase oxidoreductase8e-50197
NC_007650:832507:8520958520958544462352Burkholderia thailandensis E264 chromosome II, complete sequencecytochrome P4507e-50197
NC_009342:2528426:253142325314232532364942Corynebacterium glutamicum R chromosome, complete genomehypothetical protein6e-50197
NC_018581:759932:789577789577790542966Gordonia sp. KTR9 chromosome, complete genomeFlavodoxin reductases (ferredoxin-NADPH reductases) family 11e-49196
NC_016514:1627664:164146416414641642417954Enterobacter cloacae EcWSU1 chromosome, complete genomevanillate O-demethylase oxidoreductase5e-49194
NC_014640:3808639:381137438113743812318945Achromobacter xylosoxidans A8 chromosome, complete genomephenoxybenzoate dioxygenase subunit beta 26e-49194
NC_017986:331610:372319372319373287969Pseudomonas putida ND6 chromosome, complete genomeferredoxin4e-48192
NC_015968:1618862:163413416341341635099966Enterobacter asburiae LF7a chromosome, complete genomeferredoxin6e-48191
NC_007802:4071006:4071006407100640742153210Jannaschia sp. CCS1, complete genomeReductive dehalogenase7e-48191
NC_007974:2097334:214943221494322150397966Ralstonia metallidurans CH34 chromosome 2, complete sequenceferredoxin2e-47189
NC_013757:3012130:3027282302728230282831002Geodermatophilus obscurus DSM 43160, complete genomeferredoxin8e-47187
NC_012522:2623172:262644726264472627400954Rhodococcus opacus B4, complete genomeoxidoreductase4e-46185
NC_013757:2858327:2875240287524028775642325Geodermatophilus obscurus DSM 43160, complete genomeferredoxin1e-45184
NC_014010:1850500:189379618937961894755960Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeferredoxin3e-45182
NC_009708:1735903:175894417589441759909966Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeoxidoreductase1e-42174
NC_010465:1790739:179195917919591792924966Yersinia pseudotuberculosis YPIII, complete genomeferredoxin9e-43174
NC_017160:2787637:280841928084192809369951Yersinia pestis D182038 chromosome, complete genomeoxidoreductase FAD/NAD binding/2Fe-2S iron-sulfur cluster binding domain-containing protein8e-43174
NC_004088:1851500:187092118709211871886966Yersinia pestis KIM, complete genomediogenase beta subunit8e-43174
NC_005810:2549680:256626825662682567233966Yersinia pestis biovar Microtus str. 91001, complete genomeputative dioxygenase beta subunit8e-43174
NC_009381:2138625:215242121524212153386966Yersinia pestis Pestoides F chromosome, complete genomedioxygenase beta subunit8e-43174
NC_017168:2941938:296125729612572962222966Yersinia pestis A1122 chromosome, complete genomeputative dioxygenase subunit beta8e-43174
NC_017265:1571305:159200115920011592966966Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative dioxygenase subunit beta8e-43174
NC_010634:2894631:291118029111802912145966Yersinia pseudotuberculosis PB1/+, complete genomeferredoxin7e-43174
NC_006155:2979500:299324829932482994213966Yersinia pseudotuberculosis IP 32953, complete genomeputative dioxygenase beta subunit7e-43174
NC_009659:997779:100930010093001010232933Janthinobacterium sp. Marseille chromosome, complete genomeferredoxin/oxidoreductase2e-42173
NC_017904:1725180:172518017251801726109930Mycobacterium sp. MOTT36Y chromosome, complete genomeoxidoreductase4e-42171
NC_008268:7180663:718648171864817187458978Rhodococcus sp. RHA1, complete genomepossible oxidoreductase2e-41169
NC_012522:3224526:323170532317053232637933Rhodococcus opacus B4, complete genomeoxidoreductase8e-39160
NC_008343:2050000:205961220596122060361750Granulibacter bethesdensis CGDNIH1, complete genomeflavodoxin reductase family3e-36152
NC_008786:1507139:153306315330631534040978Verminephrobacter eiseniae EF01-2, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein2e-35149
NC_020302:146807:1585171585171595241008Corynebacterium halotolerans YIM 70093 = DSM 44683, completevanillate monooxygenase3e-33142
NC_020302:85821:8703287032892482217Corynebacterium halotolerans YIM 70093 = DSM 44683, completecytochrome P450 family protein5e-33141
NC_016906:1565868:157999615799961580943948Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative vanillate O-demethylase oxygenase subunit B7e-32137
NC_008786:1507139:1529423152942315304661044Verminephrobacter eiseniae EF01-2, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein3e-30132
NC_015942:2316354:234477523447752345707933Acidithiobacillus ferrivorans SS3 chromosome, complete genomeferredoxin2e-29129
NC_015733:2581324:2591522259152225926491128Pseudomonas putida S16 chromosome, complete genomeiron-sulfur cluster-binding protein7e-22104
NC_016943:1560000:1569167156916715703481182Blastococcus saxobsidens DD2, complete genomeputative flavodoxin reductase5e-1892
NC_016114:3711000:3723962372396237250231062Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeOxidoreductase FAD-binding domain-containing protein6e-1788.6
NC_015312:4658548:4658548465854846602511704Pseudonocardia dioxanivorans CB1190 chromosome, complete genomenitric oxide dioxygenase1e-1687.4
NC_011894:6516856:6529650652965065314101761Methylobacterium nodulans ORS 2060, complete genomeMOSC domain containing protein1e-1584.3
NC_014310:607896:6370226370226381131092Ralstonia solanacearum PSI07 megaplasmid, complete sequencephenylacetic acid degradation protein3e-1582.8
NC_018681:2447871:2447871244787124512213351Nocardia brasiliensis ATCC 700358 chromosome, complete genomemolybdopterin dinucleotide-binding region3e-1582.8
NC_020064:3157656:3181421318142131825481128Serratia marcescens FGI94, complete genomeflavodoxin reductase family protein5e-1582
NC_014228:4408500:4413590441359044147081119Xenorhabdus nematophila ATCC 19061, complete genomeputative phenylacetic acid degradation protein with NADP-linked, 2Fe-2S ferredoxin-like and riboflavin synthase-like domains1e-1480.5
NC_013892:114884:1260031260031270881086Xenorhabdus bovienii SS-2004 chromosome, complete genomephenylacetic acid degradation protein with NADP-linked, 2Fe-2S ferredoxin-like and riboflavin synthase-like domains1e-1480.5
NC_010612:6113155:6118831611883161208522022Mycobacterium marinum M, complete genomeelectron transfer protein FdxB3e-1479.3
NC_020133:5710661:5714114571411457161352022Mycobacterium liflandii 128FXT, complete genomeelectron transfer protein FdxB3e-1479.3
NC_013947:1296877:1313733131373313148331101Stackebrandtia nassauensis DSM 44728 chromosome, complete genomephenylacetate-CoA oxygenase/reductase PaaK subunit3e-1479.3
NC_021177:163000:1683581683581693681011Streptomyces fulvissimus DSM 40593, complete genomeOxidoreductase FAD-binding domain-containing protein2e-1377
NC_015183:2483653:2490745249074524918541110Agrobacterium sp. H13-3 chromosome, complete genomeflavohemoprotein3e-1376.3
NC_007912:4364215:4371101437110143731252025Saccharophagus degradans 2-40, complete genomeoxidoreductase, FAD-binding4e-1375.5
NC_013446:1648556:167066516706651670967303Comamonas testosteroni CNB-2, complete genomehypothetical protein5e-1375.5
NC_010674:658596:6611006611006622541155Clostridium botulinum B str. Eklund 17B, complete genomeputative oxidoreductase6e-1375.1
NC_010681:1234500:1244919124491912470212103Burkholderia phytofirmans PsJN chromosome 1, complete sequenceoxidoreductase FAD/NAD(P)-binding domain protein6e-1375.1
NC_016510:1874942:1897246189724618983011056Flavobacterium columnare ATCC 49512 chromosome, complete genomephenylacetic acid degradation NADH oxidoreductase PaaE2e-1273.6
NC_010723:622928:6263066263066274601155Clostridium botulinum E3 str. Alaska E43, complete genomeputative oxidoreductase3e-1272.8
NC_020125:1237536:1253179125317912542791101Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein4e-1272.4
NC_014738:469945:4742674742674753671101Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,oxidoreductase fad/nad(p)-binding domain-containing protein4e-1272.4
NC_017045:631761:6360836360836371831101Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,oxidoreductase fad/nad(p)-binding domain protein4e-1272.4
NC_003910:4234000:4236340423634042374371098Colwellia psychrerythraea 34H, complete genomeoxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein6e-1271.6
NC_016887:1714664:1747213174721317482441032Nocardia cyriacigeorgica GUH-2, complete genomeputative oxido-reductase8e-1271.2
NC_016111:5181475:5195241519524151962961056Streptomyces cattleya NRRL 8057, complete genomeOxidoreductase1e-1170.9
NC_015703:5865921:5892667589266758944781812Runella slithyformis DSM 19594 chromosome, complete genomefatty acid hydroxylase7e-1168.2
NC_020302:3014483:3044832304483230459891158Corynebacterium halotolerans YIM 70093 = DSM 44683, completephenylacetic acid degradation NADH oxidoreductase2e-1066.6
NC_012808:1920500:1920876192087619229182043Methylobacterium extorquens AM1, complete genomehypothetical protein2e-1066.6
NC_011740:621408:6315916315916327811191Escherichia fergusonii ATCC 35469, complete genomefused nitric oxide dioxygenase ; dihydropteridine reductase 23e-1066.2
NC_014541:1231021:1246029124602912472131185Ferrimonas balearica DSM 9799 chromosome, complete genomeglobin4e-1065.5
NC_009921:3473854:3499216349921635002411026Frankia sp. EAN1pec, complete genomeOxidoreductase FAD-binding domain protein4e-1065.5
NC_009725:2784334:2796779279677927979691191Bacillus amyloliquefaciens FZB42, complete genomeHmp9e-1064.7
NC_006510:1731939:1763762176376217649971236Geobacillus kaustophilus HTA426, complete genomeflavohemoglobin9e-1064.7
NC_011758:326366:3584523584523595611110Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeoxidoreductase FAD/NAD(P)-binding domain protein1e-0964.3
NC_011892:306437:313381313381313776396Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete2e-0963.9
NC_011999:728353:7364357364357375771143Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein1e-0963.9
NC_011004:1136895:1150461115046111525692109Rhodopseudomonas palustris TIE-1, complete genomeOxidoreductase FAD-binding domain protein2e-0963.5
NC_015634:959396:9848139848139859311119Bacillus coagulans 2-6 chromosome, complete genomeOxidoreductase FAD-binding domain-containing protein2e-0963.2
NC_013722:3081459:3085709308570930867851077Xanthomonas albilineans, complete genomeputative oxidoreductase protein3e-0962.8
NC_009052:1394000:1398381139838113996011221Shewanella baltica OS155, complete genomeOxidoreductase FAD-binding domain protein4e-0962.4
NC_016901:1527877:1532763153276315339291167Shewanella baltica OS678 chromosome, complete genomeOxidoreductase FAD-binding domain-containing protein5e-0962.4
NC_017343:224777:2455252455252466701146Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeflavohemo(Hemoglobin-like protein) (Flavohemoglobin) (Nitricoxide dioxygenase) (NO oxygenase) (NOD)5e-0962
NC_016147:586433:5988755988756008331959Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeoxidoreductase, FAD-binding protein1e-0860.8
NC_016604:2944555:2956768295676829577991032Mycobacterium rhodesiae NBB3 chromosome, complete genomeflavodoxin reductase family protein2e-0860.5
NC_018531:3679978:3695648369564836968531206Arthrobacter sp. Rue61a chromosome, complete genomering 1,2-phenylacetyl-CoA epoxidase component2e-0860.5
NC_016027:123853:1387241387241399441221Gluconacetobacter xylinus NBRC 3288, complete genomeflavohemoprotein2e-0860.1
NC_008711:3520515:3540886354088635420911206Arthrobacter aurescens TC1, complete genomephenylacetate-CoA oxygenase/reductase, PaaK subunit3e-0859.3
NC_015638:1824794:1828210182821018292831074Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeNitric oxide dioxygenase6e-0858.5
NC_018583:95388:1086861086861097591074Gordonia sp. KTR9 plasmid pGKT3, complete sequenceFlavodoxin reductases (ferredoxin-NADPH reductases) family 18e-0858.2
NC_009434:3611738:3644169364416936463612193Pseudomonas stutzeri A1501, complete genomeoxidoreductase, FAD-binding1e-0757.8
NC_003919:4618988:4656306465630646573821077Xanthomonas axonopodis pv. citri str. 306, complete genomeoxidoreductase1e-0757.8
NC_013510:262888:2776152776152786971083Thermomonospora curvata DSM 43183, complete genomeferredoxin1e-0757.4
NC_012803:361127:3786513786513798351185Micrococcus luteus NCTC 2665, complete genomehemoglobin-like flavoprotein3e-0756.2
NC_020054:765511:7700617700617711341074Fibrella aestuarina BUZ 2 drat genomeoxidoreductase FAD/NAD(P)-binding domain protein4e-0755.8
NC_013446:1648556:1692210169221016932201011Comamonas testosteroni CNB-2, complete genomereductase component of terephthalate 1,2-dioxygenase5e-0755.5
NC_008711:3454359:3488319348831934894161098Arthrobacter aurescens TC1, complete genomeputative flavodoxin reductases (ferredoxin-NADPH reductases) family 17e-0755.1
NC_015576:4070195:4087180408718040882681089Mycobacterium sp. JDM601 chromosome, complete genomeflavodoxin reductase Hmp5e-0652.4
NC_020302:85821:904349043490625192Corynebacterium halotolerans YIM 70093 = DSM 44683, completevanillate O-demethylase8e-0651.6