Pre_GI: BLASTP Hits

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Query: NC_007951:2206263:2209152 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2209152, End: 2209604, Length: 453

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007973:2150962:215247421524742152926453Ralstonia metallidurans CH34 chromosome 1, complete sequenceribosomal protein L99e-43172
NC_014394:2111985:213132621313262131775450Gallionella capsiferriformans ES-2 chromosome, complete genome50S ribosomal protein L96e-42169
NC_015731:3274739:327848032784803278935456Nitrosomonas sp. Is79A3 chromosome, complete genome50S ribosomal protein L96e-38156
NC_012559:2563922:256964225696422570091450Laribacter hongkongensis HLHK9, complete genomeRplI2e-36150
NC_004757:230541:233577233577234032456Nitrosomonas europaea ATCC 19718, complete genomeRibosomal protein L92e-33140
NC_013364:5083949:510686451068645107313450Escherichia coli O111:H- str. 11128, complete genome50S ribosomal protein L95e-24109
NC_012214:594667:602417602417602869453Erwinia pyrifoliae Ep1/96, complete genome50S ribosomal protein L91e-22105
NC_012997:541648:565485565485565934450Teredinibacter turnerae T7901, complete genomeribosomal protein L93e-21100
NC_018012:1274500:127609012760901276539450Thiocystis violascens DSM 198 chromosome, complete genome50S ribosomal protein L95e-2199.8
NC_014934:11341:352993529935748450Cellulophaga algicola DSM 14237 chromosome, complete genomelsu ribosomal protein l9p5e-2096.7
NC_017059:1727095:173019217301921730755564Rhodospirillum photometricum DSM 122, complete genome50S ribosomal protein L92e-1994.7
NC_011963:1482042:150683315068331507402570Rhodobacter sphaeroides KD131 chromosome 1, complete sequence50S ribosomal protein L95e-1993.2
NC_010981:712843:720131720131720685555Wolbachia pipientis, complete genomeribosomal protein L96e-1992.8
NC_012778:2015409:201679120167912017237447Eubacterium eligens ATCC 27750, complete genomelarge subunit ribosomal protein L94e-1787
NC_014376:317312:332156332156332602447Clostridium saccharolyticum WM1 chromosome, complete genomeribosomal protein L99e-1785.9
NC_016111:3308310:331714833171483317594447Streptomyces cattleya NRRL 8057, complete genome50S ribosomal protein L92e-1684.3
NC_013222:2795919:281386728138672814319453Robiginitalea biformata HTCC2501, complete genome50S ribosomal protein L92e-1684.3
NC_018750:3988196:400524040052404005686447Streptomyces venezuelae ATCC 10712, complete genomeLSU ribosomal protein L9p4e-1683.6
NC_014972:2089003:210048821004882100946459Desulfobulbus propionicus DSM 2032 chromosome, complete genome50S ribosomal protein L9P4e-1683.6
NC_012918:1697860:173257017325701733013444Geobacter sp. M21 chromosome, complete genome50S ribosomal protein L95e-1683.2
NC_015671:3470903:349372234937223494171450Cellvibrio gilvus ATCC 13127 chromosome, complete genome50S ribosomal protein L97e-1682.8
NC_014218:1948165:196217719621771962623447Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosomal protein L91e-1582.4
NC_014355:139324:140656140656141141486Candidatus Nitrospira defluvii, complete genome50S ribosomal protein L91e-1582
NC_003888:4251867:430451343045134304959447Streptomyces coelicolor A3(2), complete genome50S ribosomal protein L92e-1581.6
NC_019897:4014485:401644640164464016889444Thermobacillus composti KWC4 chromosome, complete genome50S ribosomal protein L94e-1580.5
NC_015167:313506:334534334534334986453Cellulophaga lytica DSM 7489 chromosome, complete genome50S ribosomal protein L94e-1580.1
NC_015722:4539:453945395060522Candidatus Midichloria mitochondrii IricVA chromosome, complete50S ribosomal protein L95e-1580.1
NC_021177:4041915:406245440624544062900447Streptomyces fulvissimus DSM 40593, complete genome50S ribosomal protein L95e-1579.7
NC_014909:86000:973699736997866498Candidatus Blochmannia vafer str. BVAF chromosome, complete genome50S ribosomal protein L96e-1579.7
NC_013355:105500:120193120193120822630Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeribosomal protein L92e-1477.8
NC_018145:104303:119063119063119692630Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, complete50S ribosomal protein L92e-1477.8
NC_017360:1052473:107641510764151076864450Helicobacter pylori 35A chromosome, complete genome50S ribosomal protein L93e-1477.4
NC_012526:4462:109641096411404441Deinococcus deserti VCD115, complete genomeputative 50S ribosomal protein L93e-1477.4
NC_013525:1953920:195523319552331955682450Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeribosomal protein L93e-1477.4
NC_006833:637964:654236654236654796561Wolbachia endosymbiont strain TRS of Brugia malayi, completeRibosomal protein L94e-1477
NC_014209:2257316:228320322832032283646444Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,ribosomal protein L95e-1476.6
NC_017368:852490:876118876118876567450Helicobacter pylori F16, complete genome50S ribosomal protein L96e-1476.3
NC_015977:3424178:352984435298443530311468Roseburia hominis A2-183 chromosome, complete genome50S ribosomal protein L97e-1475.9
NC_014256:683384:708049708049708498450Helicobacter pylori B8 chromosome, complete genome50S ribosomal protein L98e-1475.9
NC_017375:872478:896108896108896557450Helicobacter pylori 83 chromosome, complete genome50S ribosomal protein L98e-1475.9
NC_017365:848500:872698872698873147450Helicobacter pylori F30, complete genome50S ribosomal protein L98e-1475.9
NC_014622:5683400:570317457031745703617444Paenibacillus polymyxa SC2 chromosome, complete genome50S ribosomal protein L91e-1375.5
NC_014560:518582:541275541275541724450Helicobacter pylori SJM180 chromosome, complete genome50S ribosomal protein L91e-1375.1
NC_010321:2319820:233899623389962339439444Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, complete50S ribosomal protein L91e-1375.1
NC_014964:2301835:232101123210112321454444Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete50S ribosomal protein L91e-1375.1
NC_011244:94756:123058123058123552495Borrelia recurrentis A1, complete genome50S ribosomal protein L92e-1375.1
NC_017372:855384:879120879120879569450Helicobacter pylori India7 chromosome, complete genome50S ribosomal protein L92e-1374.3
NC_017354:848500:872491872491872940450Helicobacter pylori 52 chromosome, complete genome50S ribosomal protein L93e-1373.9
NC_018681:9262000:926489792648979265349453Nocardia brasiliensis ATCC 700358 chromosome, complete genome50S ribosomal protein L93e-1373.9
NC_017095:1461520:146798814679881468440453Fervidobacterium pennivorans DSM 9078 chromosome, complete genome50S ribosomal protein L98e-1372.8
NC_008699:4922465:494122849412284941674447Nocardioides sp. JS614, complete genomeribosomal protein L97e-1372.8
NC_010516:3903867:393729039372903937733444Clostridium botulinum B1 str. Okra, complete genomeribosomal protein L97e-1372.8
NC_010520:3938490:397194039719403972383444Clostridium botulinum A3 str. Loch Maree, complete genomeribosomal protein L97e-1372.8
NC_009699:3940984:397440839744083974851444Clostridium botulinum F str. Langeland chromosome, complete genome50S ribosomal protein L97e-1372.8
NC_017297:3939328:397210339721033972546444Clostridium botulinum F str. 230613 chromosome, complete genome50S ribosomal protein L97e-1372.8
NC_014638:321382:338988338988339434447Bifidobacterium bifidum PRL2010 chromosome, complete genome50S ribosomal protein L91e-1272
NC_009698:3706154:373957737395773740020444Clostridium botulinum A str. Hall chromosome, complete genome50S ribosomal protein L91e-1272
NC_009495:3832500:386593338659333866376444Clostridium botulinum A str. ATCC 3502 chromosome, complete genome50S ribosomal protein L91e-1272
NC_012781:3087467:309770230977023098148447Eubacterium rectale ATCC 33656, complete genome50S ribosomal protein L92e-1271.6
NC_007799:284058:297159297159297785627Ehrlichia chaffeensis str. Arkansas, complete genomeribosomal protein L92e-1271.2
NC_016609:6361862:636213863621386362584447Niastella koreensis GR20-10 chromosome, complete genome50S ribosomal protein L9P2e-1271.2
NC_009338:912894:916383916383916838456Mycobacterium gilvum PYR-GCK chromosome, complete genome50S ribosomal protein L92e-1270.9
NC_008710:108057:110916110916111413498Borrelia turicatae 91E135, complete genomeLSU ribosomal protein L9P3e-1270.9
NC_017063:775337:793883793883794332450Helicobacter pylori ELS37 chromosome, complete genome50S ribosomal protein L93e-1270.9
NC_012814:1757753:175775317577531758199447Bifidobacterium animalis subsp. lactis Bl-04, complete genome50S ribosomal protein L94e-1270.5
NC_015687:3907000:392493239249323925375444Clostridium acetobutylicum DSM 1731 chromosome, complete genome50S ribosomal protein L94e-1270.5
NC_003030:3902000:392335039233503923793444Clostridium acetobutylicum ATCC 824, complete genome50S ribosomal protein L94e-1270.5
NC_017295:3901773:392270139227013923144444Clostridium acetobutylicum EA 2018 chromosome, complete genome50S ribosomal protein L94e-1270.5
NC_016947:70210:764097640976867459Mycobacterium intracellulare MOTT-02 chromosome, complete genome50S ribosomal protein L93e-1270.5
NC_009953:5733211:573626457362645736710447Salinispora arenicola CNS-205 chromosome, complete genome50S ribosomal protein L99e-1269.3
NC_007929:1805000:180912418091241809573450Lactobacillus salivarius subsp. salivarius UCC118, complete genomeLSU ribosomal protein L9P2e-1168.2
NC_018720:357716:374845374845375294450Bifidobacterium asteroides PRL2011 chromosome, complete genome50S ribosomal protein L93e-1167.4
NC_016935:8716704:871830887183088718751444Paenibacillus mucilaginosus 3016 chromosome, complete genome50S ribosomal protein L93e-1167.4
NC_011653:1728000:173647617364761736931456Thermosipho africanus TCF52B, complete genomeribosomal protein L94e-1167
NC_006582:4256915:428498242849824285425444Bacillus clausii KSM-K16, complete genome50S ribosomal protein L95e-1166.6
NC_017219:275476:282065282065282511447Bifidobacterium longum subsp. infantis ATCC 15697, complete genome50S ribosomal protein L96e-1166.6
NC_006832:1125000:114211111421111142734624Ehrlichia ruminantium str. Welgevonden, complete genome50S ribosomal protein L99e-1165.9
NC_005295:1146500:116351211635121164135624Ehrlichia ruminantium str. Welgevonden, complete genome50S ribosomal protein L99e-1165.9
NC_006831:1112000:113176511317651132388624Ehrlichia ruminantium str. Gardel, complete genome50S ribosomal protein L99e-1165.9
NC_014363:8228:300953009530616522Olsenella uli DSM 7084 chromosome, complete genomeLSU ribosomal protein L9P8e-1165.9
NC_009706:3882500:394482339448233945266444Clostridium kluyveri DSM 555 chromosome, complete genome50S ribosomal protein L91e-1065.5
NC_011837:3814000:387632638763263876769444Clostridium kluyveri NBRC 12016, complete genome50S ribosomal protein L91e-1065.5
NC_014314:576465:602232602232602684453Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete50S ribosomal protein L91e-1065.5
NC_020195:330000:336767336767337216450Blattabacterium sp. (Blatta orientalis) str. Tarazona, completelarge subunit ribosomal protein L92e-1064.7
NC_010003:605961:613684613684614133450Petrotoga mobilis SJ95, complete genomeribosomal protein L97e-1062.8
NC_009802:931129:951781951781952227447Campylobacter concisus 13826, complete genomeribosomal protein L93e-0960.8
NC_009850:972692:976447976447976893447Arcobacter butzleri RM4018, complete genome50S ribosomal protein L94e-0960.1
NC_017187:937649:941404941404941850447Arcobacter butzleri ED-1, complete genome50S ribosomal protein L94e-0960.1
NC_009328:3504454:352628435262843526733450Geobacillus thermodenitrificans NG80-2 chromosome, complete genome50S ribosomal protein L92e-0858.2
NC_015275:1223088:123956912395691240015447Clostridium lentocellum DSM 5427 chromosome, complete genomeribosomal protein L92e-0857.8
NC_004461:1:202722027220718447Staphylococcus epidermidis ATCC 12228, complete genome50S ribosomal protein L96e-0753.1
NC_002976:2580485:259597225959722596418447Staphylococcus epidermidis RP62A, complete genomeribosomal protein L96e-0753.1
NC_007168:16431:183951839518841447Staphylococcus haemolyticus JCSC1435, complete genome50S ribosomal protein L91e-0652