Pre_GI Gene

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Host: NC_009953 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009953:5733211 Salinispora arenicola CNS-205 chromosome, complete genome

Host Lineage: Salinispora arenicola; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Found in marine sediment, this organism produces cancer-fighting compounds. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. Salinispora arenicola produces the bioactive compounds staurosporine and rifamycin which may be useful in the treatment of cancer.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
573321157357452535replicative DNA helicaseQuickGO ontologyBLASTP
5736264573671044750S ribosomal protein L9QuickGO ontologyBLASTP
5736725573696424030S ribosomal protein S18QuickGO ontologyBLASTP
57370065737509504single-strand binding proteinQuickGO ontologyBLASTP
5737616573790629130S ribosomal protein S6QuickGO ontologyBLASTP
57385085739299792endonuclease IVQuickGO ontologyBLASTP
573929657414312136hypothetical protein
57415135742403891SARP family transcriptional regulatorQuickGO ontologyBLASTP
57426905743589900hypothetical protein
574364957476984050hypothetical proteinBLASTP
574884057503391500hypothetical proteinBLASTP
57503555750747393hypothetical protein
57508845751384501hypothetical protein
575244557553842940glycosyl transferase family proteinQuickGO ontologyBLASTP
57555815756036456hypothetical proteinBLASTP