Pre_GI: BLASTP Hits

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Query: NC_007778:1053462:1066658 Rhodopseudomonas palustris HaA2, complete genome

Start: 1066658, End: 1067362, Length: 705

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011769:3434744:344837734483773449063687Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeResolvase domain protein1e-57222
NC_013173:953633:976055976055976738684Desulfomicrobium baculatum DSM 4028, complete genomeResolvase domain protein2e-53208
NC_011894:7563668:758709175870917587786696Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein4e-52204
NC_011146:1998981:200636420063642007050687Geobacter bemidjiensis Bem, complete genomeResolvase domain1e-48192
NC_007517:2564361:258513825851382585788651Geobacter metallireducens GS-15, complete genomeResolvase-like5e-47187
NC_007298:2689731:269958526995852700274690Dechloromonas aromatica RCB, complete genomeResolvase, N-terminal1e-45182
NC_012988:4633930:464917846491784649987810Methylobacterium extorquens DM4, complete genomeresolvase, N-terminal2e-44179
NC_010172:4185904:420216842021684202977810Methylobacterium extorquens PA1, complete genomeResolvase domain2e-44179
NC_007925:4060635:407180240718024072548747Rhodopseudomonas palustris BisB18, complete genomeResolvase-like2e-43175
NC_004463:5540924:555310755531075553823717Bradyrhizobium japonicum USDA 110, complete genomeputative resolvase9e-42170
NC_010511:5424004:543344754334475434157711Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein3e-40165
NC_008609:251608:272195272195272869675Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain3e-39161
NC_011000:3362382:337420133742013374914714Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative phage resolvase/recombinase for integration and excision2e-38159
NC_011146:3426500:346533034653303465995666Geobacter bemidjiensis Bem, complete genomeResolvase domain2e-37155
NC_010084:2674972:268798226879822688695714Burkholderia multivorans ATCC 17616 chromosome 1, completeresolvase domain-containing protein5e-37154
NC_010804:831000:836078836078836791714Burkholderia multivorans ATCC 17616 chromosome 1, completeserine recombinase5e-37154
NC_010725:2589014:259846725984672599141675Methylobacterium populi BJ001, complete genomeResolvase domain6e-36150
NC_012526:2155947:217099521709952171678684Deinococcus deserti VCD115, complete genomeputative resolvase, N terminal domain (putative serine recombinase family, catalytic domain)4e-33141
NC_009431:40917:563255632557005681Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, completehypothetical protein4e-31134
NC_009937:1733196:174168017416801742357678Azorhizobium caulinodans ORS 571, complete genomeresolvase family protein9e-31133
NC_011146:3991683:399538239953823996041660Geobacter bemidjiensis Bem, complete genomeResolvase domain1e-30132
NC_014923:4017575:403353240335324034305774Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeResolvase domain3e-30131
NC_014958:843456:854304854304854969666Deinococcus maricopensis DSM 21211 chromosome, complete genomeResolvase domain-containing protein3e-29128
NC_009485:5171658:518306951830695183713645Bradyrhizobium sp. BTAi1 chromosome, complete genomeDNA-invertase8e-27120
NC_009485:7021228:703264170326417033312672Bradyrhizobium sp. BTAi1 chromosome, complete genomeresolvase9e-27120
NC_014958:557208:568633568633569298666Deinococcus maricopensis DSM 21211 chromosome, complete genomeResolvase domain-containing protein1e-26119
NC_011369:4395773:440916744091674409817651Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeResolvase domain2e-25115
NC_016609:606000:625315625315625977663Niastella koreensis GR20-10 chromosome, complete genomeResolvase domain-containing protein6e-25114
NC_017249:8510121:853227585322758532970696Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-24111
NC_016812:4246542:425467142546714255303633Sinorhizobium fredii HH103, complete genomeDNA-invertase7e-24110
NC_002947:1268089:127665712766571277367711Pseudomonas putida KT2440, complete genomesite-specific recombinase, resolvase family2e-23108
NC_010505:4396800:441274144127414413436696Methylobacterium radiotolerans JCM 2831, complete genomeResolvase domain protein9e-23107
NC_002678:3701500:373736337373633738010648Mesorhizobium loti MAFF303099, complete genomesimilar to DNA invertase3e-21102
NC_016812:463000:480936480936481592657Sinorhizobium fredii HH103, complete genometransposon Tn552 DNA-invertase binR1e-20100
NC_011146:3426500:346821434682143468807594Geobacter bemidjiensis Bem, complete genomeResolvase domain2e-2099.4
NC_007492:3954345:398111639811163981862747Pseudomonas fluorescens PfO-1, complete genomeResolvase-like2e-1996.3
NC_016609:7608723:761556276155627616245684Niastella koreensis GR20-10 chromosome, complete genomeResolvase domain-containing protein3e-1995.5
NC_008463:1912348:192200019220001922695696Pseudomonas aeruginosa UCBPP-PA14, complete genomepossible resolvase6e-1994.4
NC_013441:1487058:149085514908551491550696Gordonia bronchialis DSM 43247, complete genomeResolvase domain protein6e-1787.8
NC_013132:7954000:797813379781337978768636Chitinophaga pinensis DSM 2588, complete genomeresolvase domain protein2e-1685.9
NC_008699:1132790:114850611485061149189684Nocardioides sp. JS614, complete genomeResolvase, N-terminal domain7e-1684
NC_009077:3851203:3859860385986038610021143Mycobacterium sp. JLS, complete genomeResolvase, N-terminal domain2e-1375.9
NC_006582:2944237:2992454299245429938571404Bacillus clausii KSM-K16, complete genomesite-specific recombinase for integration and excision7e-1374.3
NC_017337:1107930:1107930110793011093151386Staphylococcus aureus subsp. aureus ED133 chromosome, completePhage integrase1e-1273.2
NC_014815:841484:877025877025877648624Micromonospora sp. L5 chromosome, complete genomeresolvase domain protein2e-1273.2
NC_014355:4151798:416274541627454163440696Candidatus Nitrospira defluvii, complete genomeputative site-specific DNA recombinase3e-1272.4
NC_016906:3006748:301666730166673017305639Gordonia polyisoprenivorans VH2 chromosome, complete genomeresolvase5e-1271.2
NC_017179:3984000:398438639843863984955570Clostridium difficile BI1, complete genomeresolvase3e-1168.9
NC_009089:4177117:417883141788314179400570Clostridium difficile 630, complete genomeputative resolvase3e-1168.9
NC_009454:136468:1560681560681575431476Pelotomaculum thermopropionicum SI, complete genomehypothetical protein6e-1167.8
NC_010162:8760128:876213487621348762838705Sorangium cellulosum 'So ce 56', complete genomeputative recombinase7e-1167.4
NC_017351:643674:6436746436746450501377Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeresolvase, N terminal domain protein1e-1066.6
NC_014158:1479313:149176514917651492412648Tsukamurella paurometabola DSM 20162 chromosome, complete genomeResolvase domain protein3e-1065.9
NC_014915:2963500:3002419300241930038071389Geobacillus sp. Y412MC52 chromosome, complete genomeResolvase domain protein4e-1065.1
NC_013411:597235:6001286001286015161389Geobacillus sp. Y412MC61, complete genomeResolvase domain protein4e-1065.1
NC_014550:3316115:333747333374733338141669Arthrobacter arilaitensis Re117, complete genomeputative resolvase4e-1064.7
NC_015660:739040:7405367405367419271392Geobacillus thermoglucosidasius C56-YS93 chromosome, completeResolvase domain-containing protein5e-1064.7
NC_017353:887581:8875818875818889631383Staphylococcus lugdunensis N920143, complete genomesite-specific recombinase1e-0963.2
NC_011894:7421867:742715374271537428040888Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein2e-0962.8
NC_021175:1291707:130395313039531304597645Streptococcus oligofermentans AS 1.3089, complete genomeresolvase3e-0962.4
NC_018876:587094:596638596638597261624Methanolobus psychrophilus R15 chromosome, complete genomeputative DNA-invertase (Site-specific recombinase)4e-0962
NC_011894:3319856:335406033540603354512453Methylobacterium nodulans ORS 2060, complete genomeresolvase domain-containing protein3e-0962
NC_016048:3261166:326405332640533264604552Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase3e-0962
NC_011777:161505:165657165657166208552Bacillus cereus AH820 plasmid pAH820_272, complete sequenceresolvase4e-0961.6
NC_014614:2643203:2648799264879926504481650Clostridium sticklandii, complete genomesite-specific DNA recombinase (modular protein)4e-0961.6
NC_016629:3496630:351258835125883513109522Desulfovibrio africanus str. Walvis Bay chromosome, complete9e-0960.5
NC_009349:78000:972929729297852561Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTnpR resolvase1e-0860.1
NC_008573:195317:209233209233209793561Shewanella sp. ANA-3 plasmid 1, complete sequenceResolvase, N-terminal domain protein1e-0860.1
NC_016860:4055117:407155640715564072116561Salmonella enterica subsp. enterica serovar Typhimurium strtransposon Tn21 resolvase TnpR1e-0860.1
NC_017328:1075535:111282011128201113380561Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn21 resolvase1e-0860.1
NC_014008:1463795:147254714725471473173627Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeResolvase domain protein1e-0860.1
NC_014318:2252417:2261119226111922630531935Amycolatopsis mediterranei U32 chromosome, complete genomerecombinase2e-0859.7
NC_010172:2722000:273599827359982736843846Methylobacterium extorquens PA1, complete genomeResolvase domain2e-0859.7
NC_009380:4702815:470481947048194705493675Salinispora tropica CNB-440 chromosome, complete genomeresolvase domain-containing protein1e-0859.7
NC_009445:6621996:665476866547686655373606Bradyrhizobium sp. ORS 278 chromosome, complete genometransposon Tn21 resolvase1e-0859.7
NC_002689:1548000:155904915590491559654606Thermoplasma volcanium GSS1, complete genomeSite-specific recombinase, DNA invertase Pin-related2e-0859.3
NC_013205:526281:5333245333245347511428Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Resolvase domain protein2e-0859.3
NC_011979:773673:782603782603783214612Geobacter sp. FRC-32, complete genomeResolvase domain protein2e-0859.3
NC_007298:1418500:142663114266311427194564Dechloromonas aromatica RCB, complete genomeResolvase, N-terminal:Resolvase helix-turn-helix region2e-0859.3
NC_005090:1812833:182048618204861821109624Wolinella succinogenes DSM 1740, complete genomeHYPOTHETICAL PROTEIN-Putative Site-specific recombinase3e-0858.9
NC_017186:2252438:2261140226114022628551716Amycolatopsis mediterranei S699 chromosome, complete genomerecombinase3e-0858.9
NC_021150:4350461:435918743591874359756570Azotobacter vinelandii CA6, complete genomeResolvase-like protein4e-0858.5
NC_012560:4350465:435919143591914359760570Azotobacter vinelandii DJ, complete genomeResolvase-like protein4e-0858.5
NC_015385:2050648:2070407207040720719181512Treponema succinifaciens DSM 2489 chromosome, complete genomeResolvase domain protein4e-0858.5
NC_013173:953633:967010967010967573564Desulfomicrobium baculatum DSM 4028, complete genomeResolvase domain protein5e-0858.2
NC_006270:4149004:4173904417390441751481245Bacillus licheniformis ATCC 14580, complete genomesite-specific DNA recombinase6e-0857.8
NC_006322:4149500:4174019417401941752631245Bacillus licheniformis ATCC 14580, complete genomeSpoIVCA6e-0857.8
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete6e-0857.8
NC_008044:1736000:175037117503711751012642Silicibacter sp. TM1040, complete genomeResolvase-like8e-0857.4
NC_009921:5681677:569052656905265691095570Frankia sp. EAN1pec, complete genomeResolvase domain8e-0857.4
NC_014963:113015:129583129583130182600Terriglobus saanensis SP1PR4 chromosome, complete genomeResolvase domain-containing protein1e-0757
NC_012752:1:673267327292561Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidputative resolvase HDEF_p00079e-0857
NC_015740:2614317:262086026208602621420561Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein1e-0756.6
NC_013757:1212308:1212308121230812136901383Geodermatophilus obscurus DSM 43160, complete genomeResolvase domain protein1e-0756.6
NC_004757:905417:914348914348914908561Nitrosomonas europaea ATCC 19718, complete genomeSite-specific recombinase2e-0756.6
NC_006625:63342:812898128981846558Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceresolvase domain-containing protein2e-0756.2
NC_008345:4107847:411968141196814120238558Shewanella frigidimarina NCIMB 400, complete genomeResolvase, N-terminal domain protein2e-0756.2
NC_007298:3764048:377307737730773773631555Dechloromonas aromatica RCB, complete genomeResolvase, N-terminal:Resolvase helix-turn-helix region2e-0756.2
NC_015145:92397:117011117011117577567Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomesite-specific recombinase, DNA invertase Pin2e-0756.2
NC_008702:815264:829733829733830302570Azoarcus sp. BH72, complete genomeputative resolvase2e-0756.2
NC_012490:3094857:309723030972303097820591Rhodococcus erythropolis PR4, complete genomesite-specific recombinase2e-0755.8
NC_008347:1636660:164962816496281650176549Maricaulis maris MCS10, complete genomeResolvase3e-0755.5
NC_007274:72979:892548925489865612Pseudomonas syringae pv. phaseolicola 1448A large plasmid, completeDNA invertase3e-0755.5
NC_014828:107802:113308113308113874567Ethanoligenens harbinense YUAN-3 chromosome, complete genomeResolvase domain3e-0755.5
NC_014828:501342:515018515018515584567Ethanoligenens harbinense YUAN-3 chromosome, complete genomeResolvase domain3e-0755.5
NC_017208:4435573:447154344715434472124582Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeSite-specific recombinase, resolvase family (DNA invertase-like protein)4e-0755.1
NC_007946:289425:302117302117302680564Escherichia coli UTI89, complete genomeputative resolvase4e-0755.1
NC_015733:5909821:592850459285045929064561Pseudomonas putida S16 chromosome, complete genomeTn501 transposition resolvase6e-0754.7
NC_004349:3938:167331673317290558Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceISSod9, DNA-invertase6e-0754.7
NC_016616:760145:771982771982772542561Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase, DNA invertase Pin5e-0754.7
NC_016846:24500:256552565526215561Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,Tn4653 resolvase7e-0754.3
NC_007777:2638580:264382526438252644376552Frankia sp. CcI3, complete genomeResolvase-like7e-0754.3
NC_013446:4281250:429116142911614291727567Comamonas testosteroni CNB-2, complete genomeResolvase-like protein7e-0754.3
NC_013791:875224:877866877866878429564Bacillus pseudofirmus OF4 chromosome, complete genomeresolvase6e-0754.3
NC_014973:1941500:194952219495221950079558Geobacter sp. M18 chromosome, complete genomeResolvase domain-containing protein6e-0754.3
NC_011886:177039:188420188420188986567Arthrobacter chlorophenolicus A6, complete genomeResolvase domain protein6e-0754.3
NC_015730:1107840:112029511202951120915621Roseobacter litoralis Och 149 chromosome, complete genomebacteriophage DNA-invertase6e-0754.3
NC_012969:1574330:158524815852481585832585Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeResolvase domain-containing protein9e-0753.9
NC_017986:1862408:187575318757531876328576Pseudomonas putida ND6 chromosome, complete genomeputative DNA invertase9e-0753.9
NC_008345:4107847:413391541339154134481567Shewanella frigidimarina NCIMB 400, complete genomeResolvase, N-terminal domain protein9e-0753.9
NC_002655:5382557:538321153832115383786576Escherichia coli O157:H7 EDL933, complete genomeputative resolvase9e-0753.9
NC_002695:5352554:535320853532085353783576Escherichia coli O157:H7 str. Sakai, complete genomeputative resolvase9e-0753.9
NC_013008:5382917:538291753829175383492576Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeresolvase9e-0753.9
NC_009720:2489003:250632625063262506877552Xanthobacter autotrophicus Py2, complete genomeresolvase domain-containing protein8e-0753.9
NC_015259:673662:684998684998685570573Polymorphum gilvum SL003B-26A1 chromosome, complete genomeInvertase recombinase-like protein1e-0653.5
NC_007651:3560652:357357235735723574225654Burkholderia thailandensis E264 chromosome I, complete sequenceresolvase TnpR1e-0653.5
NC_008341:29038:398433984340400558Nitrosomonas eutropha C91 plasmid1, complete sequenceResolvase, N-terminal domain1e-0653.5
NC_008344:1364142:137394513739451374502558Nitrosomonas eutropha C91, complete genomeResolvase, N-terminal domain1e-0653.5
NC_003384:109036:122365122365122922558Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidresolvase1e-0653.5
NC_010002:2933909:295119029511902951747558Delftia acidovorans SPH-1, complete genomeResolvase domain1e-0653.5
NC_008609:1976403:206462720646272065184558Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain1e-0653.5
NC_010501:3987615:399935239993524000065714Pseudomonas putida W619, complete genomeResolvase domain1e-0653.5
NC_010995:1417329:143561314356131436203591Cellvibrio japonicus Ueda107, complete genomeinvertase/recombinase like protein1e-0653.5
NC_011353:5426793:542679354267935427431639Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeresolvase TnpR1e-0653.1
NC_009838:81913:945989459895077480Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencerecombinase1e-0653.1
NC_010815:40357:550125501255566555Geobacter lovleyi SZ plasmid pGLOV01, complete sequence1e-0653.1
NC_009140:121107:124082124082124699618Salmonella enterica enterica sv Newport str. SL254, complete1e-0653.1
NC_007517:3524715:353936435393643539975612Geobacter metallireducens GS-15, complete genomeResolvase-like1e-0653.1
NC_009956:88354:971909719097789600Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequenceresolvase domain-containing protein2e-0652.8
NC_015942:763500:775184775184775762579Acidithiobacillus ferrivorans SS3 chromosome, complete genomeResolvase domain-containing protein2e-0652.8
NC_007613:1353500:137085113708511371450600Shigella boydii Sb227, complete genomeputative DNA-invertase2e-0652.8
NC_009342:135500:153413153413154030618Corynebacterium glutamicum R chromosome, complete genomehypothetical protein2e-0652.8
NC_015312:848403:8526538526538543411689Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeResolvase domain-containing protein2e-0652.8
NC_018080:3088866:309182730918273092387561Pseudomonas aeruginosa DK2 chromosome, complete genomeresolvase domain-containing protein2e-0652.8
NC_013850:2182337:224002122400212240590570Klebsiella variicola At-22 chromosome, complete genomeResolvase domain protein3e-0652.4
NC_008463:1293079:130641013064101306970561Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative resolvase, essential for transposition4e-0652
NC_008752:2936933:296832429683242969247924Acidovorax avenae subsp. citrulli AAC00-1, complete genomeResolvase, N-terminal domain3e-0652
NC_008752:3217695:323449732344973235420924Acidovorax avenae subsp. citrulli AAC00-1, complete genomeResolvase, N-terminal domain3e-0652
NC_010002:2293670:230093123009312301503573Delftia acidovorans SPH-1, complete genomeResolvase domain3e-0652
NC_008712:250240:256259256259256807549Arthrobacter aurescens TC1 plasmid TC1, complete sequenceDNA-invertase (Site-specific recombinase resolvase family)3e-0652
NC_009656:115390:116395116395117324930Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-0651.6
NC_021066:3201500:321098232109823211554573Raoultella ornithinolytica B6, complete genomesite-specific recombinase, DNA invertase Pin4e-0651.6
NC_021182:1911088:192520819252081925777570Clostridium pasteurianum BC1, complete genomesite-specific recombinase, DNA invertase Pin5e-0651.2
NC_011666:2109274:2112431211243121141161686Methylocella silvestris BL2, complete genomeResolvase domain protein6e-0651.2
NC_012857:1097400:111612511161251116718594Ralstonia pickettii 12D chromosome 2, complete genomeResolvase domain protein6e-0651.2
NC_007507:101887:117717117717118640924Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,Tn5045 resolvase7e-0650.8
NC_013421:3752619:375992837599283760485558Pectobacterium wasabiae WPP163, complete genomeResolvase domain protein7e-0650.8
NC_012559:1635922:165037916503791650963585Laribacter hongkongensis HLHK9, complete genomeTransposon Tn2501 resolvase8e-0650.8
NC_017150:853708:858568858568859134567Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA resolvase9e-0650.4