Pre_GI: BLASTP Hits

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Query: NC_006905:3845000:3868259 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 3868259, End: 3868900, Length: 642

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:3923000:394610039461003946741642Salmonella enterica subsp. enterica serovar Typhimurium str. 798orotate phosphoribosyltransferase2e-121434
NC_010102:3851500:387490638749063875547642Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-121434
NC_003197:3902500:392595939259593926600642Salmonella typhimurium LT2, complete genomeorotate phosphoribosyltransferase2e-121434
NC_011083:3915500:393896939389693939610642Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,orotate phosphoribosyltransferase2e-121434
NC_011080:3875320:389911038991103899751642Salmonella enterica subsp. enterica serovar Newport str. SL254,orotate phosphoribosyltransferase2e-121434
NC_011094:3778000:380204538020453802686642Salmonella enterica subsp. enterica serovar Schwarzengrund strorotate phosphoribosyltransferase2e-121434
NC_011205:3942500:396566039656603966301642Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853orotate phosphoribosyltransferase2e-121434
NC_011294:3782655:380706338070633807704642Salmonella enterica subsp. enterica serovar Enteritidis strorotate phosphoribosyltransferase2e-121434
NC_012125:3840000:386311238631123863753642Salmonella enterica subsp. enterica serovar Paratyphi C strainorotate phosphoribosyltransferase2e-121434
NC_016810:3923988:394727339472733947914642Salmonella enterica subsp. enterica serovar Typhimurium strorotate phosphoribosyltransferase2e-121434
NC_016856:3916500:393965139396513940292642Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sorotate phosphoribosyltransferase2e-121434
NC_016857:3924000:394727439472743947915642Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74orotate phosphoribosyltransferase2e-121434
NC_016860:3925500:394885539488553949496642Salmonella enterica subsp. enterica serovar Typhimurium strorotate phosphoribosyltransferase2e-121434
NC_016863:3864000:388725838872583887899642Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1orotate phosphoribosyltransferase2e-121434
NC_011149:3822000:384532638453263845967642Salmonella enterica subsp. enterica serovar Agona str. SL483,orotate phosphoribosyltransferase1e-120432
NC_006511:3690828:371461837146183715259642Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCorotate phosphoribosyltransferase2e-119427
NC_011147:3686500:371028837102883710929642Salmonella enterica subsp. enterica serovar Paratyphi A strorotate phosphoribosyltransferase2e-119427
NC_015761:3611993:363581336358133636454642Salmonella bongori NCTC 12419, complete genomeorotate phosphoribosyltransferase8e-119426
NC_008563:4083558:410645141064514107107657Escherichia coli APEC O1, complete genomeorotate phosphoribosyltransferase2e-117421
NC_009792:4658909:468045046804504681106657Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-117421
NC_009800:3821824:384470838447083845349642Escherichia coli HS, complete genomeorotate phosphoribosyltransferase2e-117421
CU928145:4167043:419014941901494190790642Escherichia coli 55989 chromosome, complete genomeorotate phosphoribosyltransferase2e-117421
NC_000913:3786124:381315038131503813791642Escherichia coli K12, complete genomeorotate phosphoribosyltransferase2e-117421
NC_008253:3896704:391959739195973920238642Escherichia coli 536, complete genomeorotate phosphoribosyltransferase2e-117421
NC_011751:4251296:427440542744054275046642Escherichia coli UMN026 chromosome, complete genomeorotate phosphoribosyltransferase2e-117421
NC_011748:4167043:419014941901494190790642Escherichia coli 55989, complete genomeorotate phosphoribosyltransferase2e-117421
NC_010473:3883701:391072739107273911368642Escherichia coli str. K-12 substr. DH10B, complete genomeorotate phosphoribosyltransferase2e-117421
NC_011745:4226186:424929142492914249932642Escherichia coli ED1a chromosome, complete genomeorotate phosphoribosyltransferase2e-117421
NC_012759:3675396:370147637014763702117642Escherichia coli BW2952 chromosome, complete genomeorotate phosphoribosyltransferase2e-117421
NC_011742:3998285:402117840211784021819642Escherichia coli S88 chromosome, complete genomeorotate phosphoribosyltransferase3e-117420
NC_010658:3774110:379794937979493798590642Shigella boydii CDC 3083-94, complete genomeorotate phosphoribosyltransferase7e-117419
NC_002695:4537000:455898645589864559627642Escherichia coli O157:H7 str. Sakai, complete genomeorotate phosphoribosyltransferase7e-117419
NC_007613:3637832:366072536607253661366642Shigella boydii Sb227, complete genomeorotate phosphoribosyltransferase7e-117419
NC_002655:4606000:462796946279694628610642Escherichia coli O157:H7 EDL933, complete genomeorotate phosphoribosyltransferase7e-117419
NC_011353:4639002:466209046620904662731642Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeorotate phosphoribosyltransferase7e-117419
NC_013008:4595043:461813146181314618772642Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeorotate phosphoribosyltransferase7e-117419
NC_013364:4460500:448252844825284483169642Escherichia coli O111:H- str. 11128, complete genomeorotate phosphoribosyltransferase7e-117419
NC_013941:4427000:444893144489314449572642Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeOrotate phosphoribosyltransferase7e-117419
NC_004337:3590323:378544137854413786082642Shigella flexneri 2a str. 301, complete genomeorotate phosphoribosyltransferase1e-116418
NC_004337:3761865:378544137854413786082642Shigella flexneri 2a str. 301, complete genomeorotate phosphoribosyltransferase1e-116418
NC_017328:3794105:381764138176413818282642Shigella flexneri 2002017 chromosome, complete genomeorotate phosphoribosyltransferase1e-116418
NC_011415:4040211:406331740633174063958642Escherichia coli SE11 chromosome, complete genomeorotate phosphoribosyltransferase2e-116417
CP002185:3998112:402099640209964021637642Escherichia coli W, complete genomeorotate phosphoribosyltransferase2e-116417
NC_009801:4108179:413106341310634131704642Escherichia coli E24377A, complete genomeorotate phosphoribosyltransferase2e-116417
NC_009648:4359875:436431243643124364953642Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeorotate phosphoribosyltransferase9e-115412
NC_016845:5162481:516619151661915166832642Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,orotate phosphoribosyltransferase3e-114410
NC_012731:5074000:507849150784915079243753Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeorotate phosphoribosyltransferase6e-114409
NC_013850:109500:122755122755123396642Klebsiella variicola At-22 chromosome, complete genomeorotate phosphoribosyltransferase1e-113408
NC_011283:105245:117559117559118200642Klebsiella pneumoniae 342 chromosome, complete genomeorotate phosphoribosyltransferase1e-113408
NC_020064:4751097:475109747510974751738642Serratia marcescens FGI94, complete genomeorotate phosphoribosyltransferase1e-111402
NC_013971:73037:9938199381100022642Erwinia amylovora ATCC 49946 chromosome, complete genomeorotate phosphoribosyltransferase1e-109395
NC_013961:73037:9938199381100022642Erwinia amylovora, complete genomeOrotate phosphoribosyltransferase1e-109395
NC_013421:4790696:481555848155584816199642Pectobacterium wasabiae WPP163, complete genomeorotate phosphoribosyltransferase7e-109392
NC_010694:63654:819618196182602642Erwinia tasmaniensis, complete genomeOrotate phosphoribosyltransferase (OPRTase)2e-106385
NC_016816:127802:143183143183143824642Pantoea ananatis LMG 5342, complete genomeorotate phosphoribosyltransferase2e-105381
NC_013456:212150:215154215154215795642Vibrio sp. Ex25 chromosome 1, complete genomeorotate phosphoribosyltransferase1e-102372
NC_008700:367949:388412388412389053642Shewanella amazonensis SB2B, complete genomeOrotate phosphoribosyltransferase1e-99362
NC_008577:4533574:453657145365714537218648Shewanella sp. ANA-3 chromosome 1, complete sequenceorotate phosphoribosyltransferase4e-99360
NC_007954:334795:358537358537359178642Shewanella denitrificans OS217, complete genomeorotate phosphoribosyltransferase8e-96349
NC_016602:173314:176416176416176928513Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceorotate phosphoribosyltransferase6e-80296
NC_007963:3553678:357160535716053572309705Chromohalobacter salexigens DSM 3043, complete genomeorotate phosphoribosyltransferase1e-75282
NC_008340:277223:292213292213292872660Alkalilimnicola ehrlichei MLHE-1, complete genomeorotate phosphoribosyltransferase1e-70266
NC_014532:3967463:396746339674633968155693Halomonas elongata DSM 2581, complete genomeorotate phosphoribosyltransferase1e-66252
NC_010717:4851000:487079948707994871500702Xanthomonas oryzae pv. oryzae PXO99A, complete genomeorotate phosphoribosyltransferase2e-54211
NC_010577:151926:155176155176155835660Xylella fastidiosa M23, complete genomeorotate phosphoribosyltransferase1e-52206
NC_004556:151593:155324155324155983660Xylella fastidiosa Temecula1, complete genomeorotate phosphoribosyltransferase9e-53206
NC_003919:4568892:458949845894984590157660Xanthomonas axonopodis pv. citri str. 306, complete genomeorotate phosphoribosyltransferase5e-52204
NC_007508:4593446:461400246140024614661660Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeorotate phosphoribosyltransferase1e-51202
NC_014828:2657623:267661226766122677295684Ethanoligenens harbinense YUAN-3 chromosome, complete genomeorotate phosphoribosyltransferase1e-44179
NC_014500:4049384:406358040635804064221642Dickeya dadantii 3937 chromosome, complete genomeOrotate phosphoribosyltransferase6e-36150
NC_011529:1375920:138877813887781389335558Thermococcus onnurineus NA1, complete genomeorotate phosphoribosyltransferase2e-1582.4
NC_003106:1457802:147967814796781480265588Sulfolobus tokodaii str. 7, complete genomeorotate phosphoribosyltransferase2e-1479
NC_018876:1061682:107871010787101079246537Methanolobus psychrophilus R15 chromosome, complete genomeorotate phosphoribosyltransferase2e-1375.9
NC_015315:416140:437668437668438249582Thermoproteus uzoniensis 768-20 chromosome, complete genomeorotate phosphoribosyltransferase1e-1273.2
NC_008148:2290806:231447623144762315012537Rubrobacter xylanophilus DSM 9941, complete genomeorotate phosphoribosyltransferase2e-1272.8
NC_007681:1157402:118151611815161182052537Methanosphaera stadtmanae DSM 3091, complete genomePyrE9e-1270.1
NC_012589:1502390:150467315046731505260588Sulfolobus islandicus L.S.2.15, complete genomeorotate phosphoribosyltransferase5e-1167.8
NC_012623:1141951:116345911634591164046588Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeorotate phosphoribosyltransferase5e-1167.8
NC_012632:1518520:154111815411181541705588Sulfolobus islandicus M.16.27 chromosome, complete genomeorotate phosphoribosyltransferase5e-1167.8
NC_013769:1478546:150114415011441501731588Sulfolobus islandicus L.D.8.5 chromosome, complete genomeorotate phosphoribosyltransferase5e-1167.8
NC_017275:1436875:145947414594741460061588Sulfolobus islandicus HVE10/4 chromosome, complete genomeorotate phosphoribosyltransferase5e-1167.8
NC_002754:513790:535932535932536519588Sulfolobus solfataricus P2, complete genomeorotate phosphoribosyltransferase6e-1167.4
NC_014122:606000:625894625894626397504Methanocaldococcus infernus ME chromosome, complete genomeorotate phosphoribosyltransferase5e-0960.8
NC_013407:146000:165695165695166225531Methanocaldococcus vulcanius M7, complete genomeorotate phosphoribosyltransferase8e-0960.5
NC_014471:1303634:130586713058671306454588Ignisphaera aggregans DSM 17230 chromosome, complete genomeorotate phosphoribosyltransferase2e-0859.3
NC_015954:2873402:289333628933362893962627Halophilic archaeon DL31 chromosome, complete genomepyrE-like protein2e-0859.3
NC_011660:724711:737001737001737630630Listeria monocytogenes HCC23 chromosome, complete genomeorotate phosphoribosyltransferase2e-0859.3
NC_014019:4094750:409652240965224097160639Bacillus megaterium QM B1551 chromosome, complete genomeorotate phosphoribosyltransferase2e-0858.9
NC_017138:980696:996596996596997234639Bacillus megaterium WSH-002 chromosome, complete genomeOrotate phosphoribosyltransferase PyrE2e-0858.9
NC_019903:2806466:281052628105262811131606Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,orotate phosphoribosyltransferase2e-0858.9
NC_007907:3230513:325088432508843251489606Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0858.2
NC_011830:4234392:426062342606234261228606Desulfitobacterium hafniense DCB-2, complete genomeorotate phosphoribosyltransferase7e-0857.4
NC_013768:1983711:199177419917741992403630Listeria monocytogenes 08-5923, complete genomeorotate phosphoribosyltransferase1e-0757
NC_003212:1958500:196099419609941961623630Listeria innocua Clip11262, complete genomeorotate phosphoribosyltransferase9e-0857
NC_003210:1904152:190659219065921907221630Listeria monocytogenes EGD-e, complete genomeorotate phosphoribosyltransferase8e-0857
NC_002973:1877905:188596718859671886596630Listeria monocytogenes str. 4b F2365, complete genomeorotate phosphoribosyltransferase1e-0756.6
NC_008312:577302:5785385785385800401503Trichodesmium erythraeum IMS101, complete genomeorotate phosphoribosyltransferase1e-0756.6
NC_014915:1080793:108242210824221083045624Geobacillus sp. Y412MC52 chromosome, complete genomeorotate phosphoribosyltransferase1e-0756.2
NC_013411:1941762:194247819424781943101624Geobacillus sp. Y412MC61, complete genomeorotate phosphoribosyltransferase1e-0756.2
NC_009483:2401209:242389024238902424438549Geobacter uraniireducens Rf4 chromosome, complete genomeorotate phosphoribosyltransferase2e-0755.8
NC_008555:1874878:188054118805411881170630Listeria welshimeri serovar 6b str. SLCC5334, complete genomeorotate phosphoribosyltransferase3e-0755.1
NC_009633:4308016:431273943127394313320582Alkaliphilus metalliredigens QYMF chromosome, complete genomeorotate phosphoribosyltransferase6e-0754.3
NC_013891:1861294:186477118647711865400630Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomehypothetical protein7e-0754.3
NC_015216:652266:654608654608655132525Methanobacterium sp. AL-21 chromosome, complete genomeorotate phosphoribosyltransferase1e-0653.5
NC_014633:583858:592855592855593478624Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceorotate phosphoribosyltransferase1e-0653.1
NC_014410:1527405:153975815397581540333576Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,orotate phosphoribosyltransferase2e-0652.8
NC_008319:262894:287284287284287853570Synechococcus sp. CC9311, complete genomeorotate phosphoribosyltransferase3e-0652
NC_006958:2911711:293078829307882931342555Corynebacterium glutamicum ATCC 13032, complete genomeorotate phosphoribosyltransferase3e-0652
NC_003450:2938404:295748329574832958037555Corynebacterium glutamicum ATCC 13032, complete genomeorotate phosphoribosyltransferase3e-0652
NC_015416:1645419:166457416645741665131558Methanosaeta concilii GP-6 chromosome, complete genomeorotate phosphoribosyltransferase4e-0651.6
NC_015555:1450704:146298114629811463556576Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeorotate phosphoribosyltransferase6e-0650.8
NC_015391:1248583:126310512631051263737633Carnobacterium sp. 17-4 chromosome, complete genomeorotate phosphoribosyltransferase7e-0650.8