Pre_GI: BLASTP Hits

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Query: NC_006512:696000:703511 Idiomarina loihiensis L2TR, complete genome

Start: 703511, End: 704071, Length: 561

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006512:1722138:174273917427391743299561Idiomarina loihiensis L2TR, complete genomeIntegrase/recombinase, XerC/XerD family9e-91332
NC_009092:1441813:145236114523611452921561Shewanella loihica PV-4, complete genomephage integrase family protein3e-70264
NC_013456:212150:227153227153227713561Vibrio sp. Ex25 chromosome 1, complete genomesite-specific recombinase phage integrase family4e-69260
NC_008322:2077628:209227720922772092891615Shewanella sp. MR-7, complete genomephage integrase family protein8e-69259
NC_008321:1993541:200790620079062008544639Shewanella sp. MR-4, complete genomephage integrase family protein1e-68258
NC_008577:2115440:212711521271152127729615Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein4e-68256
NC_009901:1516340:152799315279931528553561Shewanella pealeana ATCC 700345, complete genomeintegrase family protein2e-66251
NC_018678:2382708:239659923965992397159561Alteromonas macleodii str. 'English Channel 673' chromosome,integrase family protein7e-59226
NC_015566:1127595:113875111387511139302552Serratia sp. AS12 chromosome, complete genomeintegrase family protein1e-25115
NC_015567:1127780:113893611389361139487552Serratia sp. AS9 chromosome, complete genomeintegrase family protein1e-25115
NC_012925:1357783:136497613649761365518543Streptococcus suis P1/7, complete genomephage integrase family protein4e-24110
NC_012924:1446190:145338314533831453925543Streptococcus suis SC84, complete genomephage integrase family protein4e-24110
NC_012926:1496510:150370315037031504245543Streptococcus suis BM407 chromosome, complete genomephage integrase family protein4e-24110
NC_009442:1446508:145370114537011454273573Streptococcus suis 05ZYH33 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein4e-24110
NC_009443:1445936:145312714531271453699573Streptococcus suis 98HAH33, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein4e-24110
UCMB5137:1522159:153732315373231537868546Bacillus atrophaeus UCMB-5137putative bacteriophage integrase2e-22105
NC_009697:2558286:258053225805322581077546Clostridium botulinum A str. ATCC 19397 chromosome, completephage integrase family site specific recombinase3e-21101
NC_014650:603500:628630628630629172543Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase9e-2199.8
NC_020272:1311932:133478513347851335327543Bacillus amyloliquefaciens IT-45, complete genomesite-specific tyrosine recombinase2e-2098.6
NC_012984:1074721:109936710993671099963597Lactobacillus plantarum JDM1, complete genomeintegrase/recombinase4e-2097.8
NC_014916:22644:437804378044349570Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequenceintegrase family protein5e-2097.4
NC_004567:1089231:108996710899671090554588Lactobacillus plantarum WCFS1, complete genomeintegrase/recombinase, fragment (putative)5e-2097.4
NC_017297:3428429:345042734504273450972546Clostridium botulinum F str. 230613 chromosome, complete genomesite-specific recombinase, phage integrase family6e-2097.1
NC_009699:3429817:345181334518133452358546Clostridium botulinum F str. Langeland chromosome, complete genomephage integrase family site specific recombinase6e-2097.1
NC_012658:1405788:141169614116961412241546Clostridium botulinum Ba4 str. 657 chromosome, complete genomephage integrase family site-specific recombinase7e-2096.7
NC_015875:34270:484594845949001543Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein2e-1995.5
NC_010516:2676746:269860026986002699145546Clostridium botulinum B1 str. Okra, complete genomesite-specific recombinase, phage integrase family4e-1994.4
NC_010723:2269372:228565622856562286198543Clostridium botulinum E3 str. Alaska E43, complete genomesite-specific recombinase, phage integrase family1e-1893.2
UCMB5137:1522159:153330715333071533849543Bacillus atrophaeus UCMB-5137site-specific recombinase, phage integrase family protein1e-1893.2
NC_003485:296140:308140308140308715576Streptococcus pyogenes MGAS8232, complete genomehypothetical protein1e-1892.8
NC_004116:1827351:185300518530051853547543Streptococcus agalactiae 2603V/R, complete genomeprophage LambdaSa2, site-specific recombinase, phage integrase family2e-1892
NC_004606:1107500:113322111332211133796576Streptococcus pyogenes SSI-1, complete genomeputative integrase/recombinase, XerC/XerD family3e-1891.7
NC_004070:747146:762960762960763535576Streptococcus pyogenes MGAS315, complete genomeputative recombinase - phage associated3e-1891.7
NC_009697:3110772:312844431284443128989546Clostridium botulinum A str. ATCC 19397 chromosome, completephage integrase family site specific recombinase3e-1891.7
NC_020207:1614000:162429216242921624864573Enterococcus faecium NRRL B-2354, complete genomesite-specific recombinase2e-1788.6
NC_013766:679906:692805692805693347543Listeria monocytogenes 08-5578 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase, phage integrase family3e-1788.2
NC_008261:1787345:180851718085171809065549Clostridium perfringens ATCC 13124, complete genomesite-specific recombinase, phage integrase family1e-1582.4
NC_013891:1639694:165579916557991656341543Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomesite-specific recombinase, phage integrase family7e-1580.1
NC_007907:960104:101699610169961017559564Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-1579.7
NC_015634:2595500:262310826231082623683576Bacillus coagulans 2-6 chromosome, complete genomeDNA integration/recombination/inversion protein1e-1479.3
NC_014554:1019730:104094210409421041406465Lactobacillus plantarum subsp. plantarum ST-III chromosome,integrase1e-1479.3
NC_016052:2335648:234426723442672344818552Tetragenococcus halophilus NBRC 12172, complete genomeputative site-specific recombinase4e-1477.4
NC_021184:3533500:354809635480963548656561Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD2e-1375.5
NC_010382:3643288:366613336661333666714582Lysinibacillus sphaericus C3-41, complete genomephage integrase family site specific recombinase6e-1373.9
NC_015690:1186545:120681212068121207384573Paenibacillus mucilaginosus KNP414 chromosome, complete genomeintegrase family protein2e-1272.4
NC_016613:2596464:260011526001152600969855Vibrio sp. EJY3 chromosome 1, complete sequenceXerC/XerD family integrase/recombinase3e-1271.6
NC_007954:334795:352296352296352925630Shewanella denitrificans OS217, complete genomephage integrase4e-1270.9
NC_014011:1139818:115296411529641153572609Aminobacterium colombiense DSM 12261 chromosome, complete genomeintegrase family protein4e-1270.9
NC_012796:985000:998898998898999455558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase7e-1167
NC_012796:3374911:342491734249173425474558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-1066.2
NC_008497:1111891:111574411157441116331588Lactobacillus brevis ATCC 367, complete genomeIntegrase2e-1065.9
NC_012796:1645856:166448516644851665042558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-1065.9
NC_012796:1049034:106572110657211066278558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1065.1
NC_012796:3600630:362703436270343627591558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-1065.1
NC_009012:2706755:272158027215802722146567Clostridium thermocellum ATCC 27405, complete genomephage integrase1e-0963.2
NC_020134:1941523:195526219552621955822561Clostridium stercorarium subsp. stercorarium DSM 8532, completeintegrase family protein1e-0962.8
NC_020409:1173796:118265711826571183256600Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase family protein1e-0962.8
NC_016803:3502749:352127235212723521871600Desulfovibrio desulfuricans ND132 chromosome, complete genomeintegrase family protein2e-0962.4
NC_012796:77071:953999539995956558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-0961.6
NC_012796:1049034:113043711304371130994558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase5e-0960.8
NC_012796:77071:114358114358114915558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase6e-0960.5
NC_008529:887008:942654942654943220567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase8e-0960.1
NC_008529:906576:916198916198916764567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase8e-0960.1
NC_008529:887008:916198916198916764567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase8e-0960.1
NC_008529:918277:942654942654943220567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase8e-0960.1
NC_008529:906576:942654942654943220567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase8e-0960.1
NC_020181:4800298:480979548097954810412618Enterobacter aerogenes EA1509E, complete genomephage integrase family protein7e-0960.1
NC_014844:511552:517143517143517697555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeintegrase family protein1e-0859.3
NC_012796:3600630:361445136144513615008558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-0859.3
NC_012796:3600630:364833536483353648892558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-0859.3
NC_016002:2946702:296022929602292960843615Pseudogulbenkiania sp. NH8B, complete genomephage integrase family protein2e-0858.9
NC_012796:4075583:416552141655214166078558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-0858.5
NC_011004:4073916:410016341001634100795633Rhodopseudomonas palustris TIE-1, complete genomeintegrase family protein3e-0858.5
NC_012792:962292:971437971437972060624Variovorax paradoxus S110 chromosome 2, complete genomeintegrase family protein3e-0858.2
NC_014394:1626699:163772816377281638342615Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein3e-0858.2
NC_014153:2077647:208438620843862085012627Thiomonas intermedia K12 chromosome, complete genomeintegrase family protein4e-0857.8
NC_013446:2164974:218941721894172190040624Comamonas testosteroni CNB-2, complete genomephage integrase4e-0857.8
NC_015563:4093650:410572541057254106348624Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein4e-0857.8
NC_014910:2779573:278745227874522788075624Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein6e-0857.4
NC_009617:1085000:108757010875701088175606Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephage integrase family protein2e-0755.8
NC_012796:1049034:109984510998451100402558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-0755.5
NC_011883:2680380:269246126924612693054594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein4e-0754.7
NC_011883:2680380:270035627003562700949594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein4e-0754.7
NC_020209:47504:858688586886488621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC3e-0754.7
NC_020209:47504:604376043761057621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC3e-0754.7
NC_020829:940692:982480982480983100621Pseudomonas denitrificans ATCC 13867, complete genomesite-specific recombinase XerC4e-0754.3
NC_020291:1122282:112310111231011123706606Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage integrase family protein4e-0754.3
NC_017047:2042346:206242220624222063024603Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein5e-0754.3
NC_017075:1970168:197925419792541979877624Rubrivivax gelatinosus IL144, complete genomephage integrase family protein5e-0753.9
NC_009434:3611738:368162936816293682249621Pseudomonas stutzeri A1501, complete genomephage integrase family site specific recombinase9e-0753.5
NC_015942:355944:362190362190362819630Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein7e-0753.5
NC_016641:2587000:260566426056642606509846Paenibacillus terrae HPL-003 chromosome, complete genomesite-specific recombinase XerC1e-0653.1
NC_014012:3812754:382801038280103828606597Shewanella violacea DSS12, complete genomesite-specific recombinase, phage integrase family2e-0652.4
NC_016641:5671186:5692012569201256931511140Paenibacillus terrae HPL-003 chromosome, complete genomeintegrase/recombinase y4qK2e-0652.4
NC_018876:2305659:233518723351872335762576Methanolobus psychrophilus R15 chromosome, complete genomeintegrase family protein2e-0652
NC_008702:2520500:252684025268402527454615Azoarcus sp. BH72, complete genomeputative Tyrosine recombinase xerD3e-0651.6
NC_013887:1104840:111127211112721111829558Methanocaldococcus sp. FS406-22 chromosome, complete genomeintegrase family protein4e-0651.2
NC_015572:2186394:220779522077952208418624Methylomonas methanica MC09 chromosome, complete genomeintegrase family protein4e-0651.2
NC_009778:1222273:123099312309931231595603Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-0651.2
NC_012108:2159230:216676321667632167356594Desulfobacterium autotrophicum HRM2, complete genomesite-specific recombinase/integrase XerD4e-0651.2
NC_009512:2238437:224339322433932244109717Pseudomonas putida F1, complete genomephage integrase family protein4e-0650.8