Pre_GI: BLASTP Hits

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Query: NC_006511:1808815:1825604 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1825604, End: 1826151, Length: 548

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:1078113:108120810812081081755548Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-70265
NC_010102:2020762:203531720353172035865549Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-30132
NC_011205:1147556:115065111506511151199549Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-30132
NC_011149:1035990:104172810417281042276549Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-30132
NC_011274:1057887:105931310593131059861549Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-30132
NC_011083:1173802:117689711768971177445549Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-30132
NC_011294:1048223:105002410500241050572549Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-30132
NC_012125:2687980:270254627025462703094549Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane protein1e-30132
NC_003197:1170746:117217211721721172720549Salmonella typhimurium LT2, complete genomeputative outer membrane protein1e-30132
NC_016810:1126693:112849411284941129042549Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-30132
NC_016856:1128715:113051611305161131064549Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane protein1e-30132
NC_016857:1126693:112849411284941129042549Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane protein1e-30132
NC_016860:1168431:116985711698571170405549Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane protein1e-30132
NC_016863:1128381:112980711298071130355549Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane protein1e-30132
NC_016831:1950650:196521419652141965762549Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-29129
NC_011094:1127983:113107811310781131626549Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-29128
NC_017046:1127325:112878411287841129299516Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-25112
NC_016514:1627664:162903016290301629587558Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YbcL3e-1581.3
NC_009901:1516340:151984615198461520373528Shewanella pealeana ATCC 700345, complete genomePEBP family protein8e-1270.1
NC_013008:2910567:292261229226122923163552Escherichia coli O157:H7 str. TW14359 chromosome, complete genomekinase inhibitor1e-1169.3
NC_013941:699286:710239710239710790552Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphatidylethanolamine-binding protein1e-1169.3
AC_000091:558920:570116570116570667552Escherichia coli W3110 DNA, complete genomepredicted kinase inhibitor1e-1169.3
NC_010473:498252:509448509448509999552Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted kinase inhibitor1e-1169.3
NC_000913:558920:570116570116570667552Escherichia coli K12, complete genomeDLP12 prophage; predicted kinase inhibitor1e-1169.3
NC_012759:461680:472876472876473427552Escherichia coli BW2952 chromosome, complete genomeputative kinase inhibitor1e-1169.3
NC_012947:3231893:324234532423453242896552Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completekinase inhibitor1e-1169.3
NC_012967:531000:542783542783543334552Escherichia coli B str. REL606 chromosome, complete genomeputative kinase inhibitor1e-1169.3
NC_012779:2424967:244479824447982445349552Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-1166.6
NC_008639:2786447:280605428060542806539486Chlorobium phaeobacteroides DSM 266, complete genomePEBP family protein1e-1066.2
NC_010334:1561691:156511715651171565644528Shewanella halifaxensis HAW-EB4, complete genomePEBP family protein1e-1065.9
NC_013508:2356865:238442323844232384974552Edwardsiella tarda EIB202, complete genomeDLP12 prophage; predicted kinase inhibitor2e-1065.5
NC_002655:919654:931451931451931927477Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-1065.1
NC_002695:917509:929799929799930275477Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1065.1
NC_011353:921500:933164933164933640477Escherichia coli O157:H7 str. EC4115 chromosome, complete genomekinase inhibitor protein2e-1065.1
NC_013008:918215:934757934757935233477Escherichia coli O157:H7 str. TW14359 chromosome, complete genomekinase inhibitor protein2e-1065.1
NC_013941:1014386:102682910268291027305477Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-1065.1
NC_012967:786534:800059800059800535477Escherichia coli B str. REL606 chromosome, complete genomeputative kinase inhibitor protein2e-1065.1
NC_007912:1924392:194016219401621940734573Saccharophagus degradans 2-40, complete genomephospholipid-binding protein3e-1064.7
NC_013353:867869:881393881393881869477Escherichia coli O103:H2 str. 12009, complete genomekinase inhibitor4e-1064.3
AP010958:867869:881393881393881869477Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted kinase inhibitor4e-1064.3
NC_014118:1559770:157122815712281571800573Burkholderia sp. CCGE1002 chromosome chromosome 2, completePEBP family protein6e-1063.9
NC_012559:2353236:237554523755452376099555Laribacter hongkongensis HLHK9, complete genomeputative phospholipid-binding protein7e-1063.5
NC_011601:756885:771868771868772344477Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomekinase inhibitor protein7e-1063.5
NC_013592:1056500:106081310608131061394582Dickeya dadantii Ech586, complete genomePEBP family protein1e-0962.4
NC_014121:4043198:406973640697364070212477Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-0961.6
NC_008391:699222:710842710842711414573Burkholderia cepacia AMMD chromosome 2, complete sequenceYbhB and YbcL5e-0960.5
NC_008686:1383891:141573814157381416283546Paracoccus denitrificans PD1222 chromosome 1, complete sequencePEBP family protein2e-0858.5
NC_015381:3457784:350546335054633505966504Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein6e-0857
NC_010622:2385932:240427624042762404785510Burkholderia phymatum STM815 chromosome 1, complete sequencePEBP family protein1e-0756.2