Pre_GI: BLASTP Hits

Some Help

Query: NC_006510:746814:752586 Geobacillus kaustophilus HTA426, complete genome

Start: 752586, End: 753659, Length: 1074

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014206:2941575:2955729295572929568021074Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein0714
NC_016593:762216:7679087679087689811074Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completespermidine/putrescine-binding periplasmic protein0713
NC_012914:469117:4691174691174701871071Paenibacillus sp. JDR-2, complete genomeextracellular solute-binding protein family 18e-157553
NC_019897:3810000:3812967381296738140371071Thermobacillus composti KWC4 chromosome, complete genomespermidine/putrescine-binding periplasmic protein7e-143506
NC_007929:111092:1330981330981341831086Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSpermidine/putrescine-binding protein5e-115414
NC_004461:779000:7919067919067929791074Staphylococcus epidermidis ATCC 12228, complete genomepotD protein2e-110399
NC_009922:2721343:2741311274131127423571047Alkaliphilus oremlandii OhILAs, complete genomeextracellular solute-binding protein family 11e-81303
NC_020134:1328302:1342631134263113436891059Clostridium stercorarium subsp. stercorarium DSM 8532, completespermidine/putrescine transport system substarte-binding protein PotD1e-76286
NC_013716:1298932:1302979130297913040251047Citrobacter rodentium ICC168, complete genomespermidine/putrescine ABC transporter, substrate-binding protein1e-66253
NC_002505:1507860:1521892152189215229291038Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein7e-66251
NC_009457:1068000:1080309108030910813461038Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein7e-66251
NC_012578:1465302:1479334147933414803711038Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein7e-66251
NC_012668:2115228:2121142212114221221791038Vibrio cholerae MJ-1236 chromosome 1, complete sequenceputrescine ABC transporter putrescine-binding protein PotF7e-66251
NC_016445:984856:9988879988879999241038Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine transport system substrate-binding protein7e-66251
NC_016944:1504888:1518920151892015199571038Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein7e-66251
NC_010498:1995500:2023681202368120247271047Escherichia coli SMS-3-5, complete genomespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein1e-65250
NC_016048:1930089:1955292195529219563651074Oscillibacter valericigenes Sjm18-20, complete genomespermidine/putrescine ABC transporter spermidine/putrescine-binding protein2e-61236
NC_010519:1802294:1824678182467818257631086Haemophilus somnus 2336 chromosome, complete genomeextracellular solute-binding protein3e-57222
NC_008309:1289370:1310334131033413114191086Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein7e-57221
NC_010278:398521:4181284181284192101083Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,spermidine/putrescine-binding periplasmic protein2e-54213
NC_009053:393700:4134014134014144831083Actinobacillus pleuropneumoniae L20, complete genomespermidine/putrescine-binding periplasmic protein 1 precursor2e-54213
NC_008312:4358134:4377026437702643780901065Trichodesmium erythraeum IMS101, complete genomeextracellular solute-binding protein, family 14e-54212
NC_010939:405477:4411834411834422651083Actinobacillus pleuropneumoniae serovar 7 str. AP76, completespermidine/putrescine-binding periplasmic protein 1 precursor3e-54212
NC_009457:1068000:1081457108145710825571101Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein8e-54211
NC_016445:984856:1000036100003610010671032Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein7e-54211
NC_016944:1504888:1520069152006915211001032Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine transport system substrate-binding protein7e-54211
NC_002505:1507860:1523041152304115241411101Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein6e-54211
NC_012578:1465302:1480483148048314815831101Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein6e-54211
NC_012668:2115228:2119984211998421210301047Vibrio cholerae MJ-1236 chromosome 1, complete sequenceABC transporter periplasmic spermidine putrescine-binding protein PotD6e-54211
NC_008309:1155218:1155218115521811562551038Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein7e-50197
NC_010483:1441614:1463190146319014642001011Thermotoga sp. RQ2, complete genomespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein3e-49195
NC_009718:1470972:1474505147450514755391035Fervidobacterium nodosum Rt17-B1, complete genomeextracellular solute-binding protein5e-48192
NC_013173:2305394:2305394230539423064311038Desulfomicrobium baculatum DSM 4028, complete genomeextracellular solute-binding protein family 15e-48191
NC_014221:38000:5405354053551231071Truepera radiovictrix DSM 17093 chromosome, complete genomeextracellular solute-binding protein family 11e-47190
NC_009439:101174:1242421242421253361095Pseudomonas mendocina ymp, complete genomeextracellular solute-binding protein2e-44179
NC_009831:1255995:1257662125766212587621101Shewanella sediminis HAW-EB3, complete genomeextracellular solute-binding protein, family 12e-44179
NC_004129:3965947:3982527398252739836271101Pseudomonas fluorescens Pf-5, complete genomeputrescine ABC transporter, periplasmic putrescine-binding protein1e-43177
NC_015379:6714545:6732759673275967338591101Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative ABC transporter, periplasmic component1e-42174
NC_012560:4929683:4936837493683749379521116Azotobacter vinelandii DJ, complete genomePolyamine transporter periplasmic protein PotF9e-43174
NC_021150:4929670:4936824493682449379391116Azotobacter vinelandii CA6, complete genomePolyamine transporter periplasmic protein PotF9e-43174
NC_002947:4167500:4241729424172942428321104Pseudomonas putida KT2440, complete genomeperiplasmic polyamine-binding protein, putative8e-43174
NC_016612:3361802:3379230337923033803421113Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputrescine ABC transporter periplasmic-binding protein1e-41170
NC_002947:4362271:4368119436811943692281110Pseudomonas putida KT2440, complete genomeABC transporter, periplasmic polyamine-binding protein, putative5e-40165
NC_009672:30000:3000930009311631155Ochrobactrum anthropi ATCC 49188 plasmid pOANT04, completeextracellular solute-binding protein1e-39164
NC_020829:940692:9802589802589813701113Pseudomonas denitrificans ATCC 13867, complete genomeextracellular solute-binding protein4e-39162
NC_008781:2981868:3003498300349830046581161Polaromonas naphthalenivorans CJ2, complete genomeextracellular solute-binding protein, family 12e-37156
NC_002678:5714000:5723382572338257244641083Mesorhizobium loti MAFF303099, complete genomeABC transporter, binding protein7e-37154
NC_007435:1914375:1924940192494019262981359Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative ABC transport system, exported substrate-binding protein1e-36154
NC_007650:84140:9424394243952741032Burkholderia thailandensis E264 chromosome II, complete sequenceputrescine ABC transporter, periplasmic putrescine-binding protein, putative1e-36154
NC_009078:74954:8604786047870781032Burkholderia pseudomallei 1106a chromosome II, complete sequenceABC transport system, exported substrate-binding protein1e-36153
NC_008044:857759:8797618797618807861026Silicibacter sp. TM1040, complete genomeextracellular solute-binding protein, family 13e-36152
NC_008027:3844355:3863214386321438643171104Pseudomonas entomophila L48, complete genomeABC transporter, periplasmic polyamine-binding protein5e-36152
NC_009512:1025365:1028350102835010294291080Pseudomonas putida F1, complete genomeextracellular solute-binding protein, family 12e-35150
NC_016830:3697173:3704398370439837055011104Pseudomonas fluorescens F113 chromosome, complete genomeperiplasmic spermidine putrescine-binding protein3e-35149
NC_015379:3175500:3183989318398931850921104Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative putrescine-binding periplasmic protein precursor2e-35149
NC_004129:3123000:3128254312825431293421089Pseudomonas fluorescens Pf-5, complete genomeputrescine ABC transporter, periplasmic putrescine-binding protein6e-35148
NC_020829:4390417:440740144074014408384984Pseudomonas denitrificans ATCC 13867, complete genomeputative periplasmic polyamine binding protein8e-34144
NC_006351:73000:8666886668876991032Burkholderia pseudomallei K96243 chromosome 2, complete sequenceABC transport system, exported substrate-binding protein5e-32138
NC_009075:92210:1059791059791070101032Burkholderia pseudomallei 668 chromosome II, complete sequenceputative ABC transporter, periplasmic solute-binding protein5e-32138
NC_015385:2135456:2153331215333121543801050Treponema succinifaciens DSM 2489 chromosome, complete genomeextracellular solute-binding protein family 12e-30133
NC_011666:1923776:1937462193746219385711110Methylocella silvestris BL2, complete genomeextracellular solute-binding protein family 11e-29130
NC_016113:1143580:1142327114232711435831257Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceABC transporter substrate-binding protein6e-25115
NC_013515:65822:8754687546885951050Streptobacillus moniliformis DSM 12112, complete genomeextracellular solute-binding protein family 19e-25114
NC_016590:548312:5483125483125494121101Burkholderia sp. YI23 chromosome 3, complete sequenceextracellular solute-binding protein2e-21103
NC_017059:3404000:3404073340407334052271155Rhodospirillum photometricum DSM 122, complete genomeSpermidine/putrescine-binding periplasmic protein1e-20101
NC_008209:253663:2723772723772734831107Roseobacter denitrificans OCh 114, complete genomespermidine/putrescine-binding periplasmic protein, putative7e-21101
NC_011985:194973:2123562123562133961041Agrobacterium radiobacter K84 chromosome 1, complete genomespermidine/putrescine ABC transporter1e-1687.4
NC_017150:2290681:2318414231841423195441131Acetobacter pasteurianus IFO 3283-01-42C, complete genometransporter substrate-binding periplasmic protein8e-1685.1
NC_014483:5015890:5018463501846350195361074Paenibacillus polymyxa E681 chromosome, complete genomeSpermidine/putrescine-binding periplasmic protein4e-1582.4
NC_016641:1148220:1148220114822011492931074Paenibacillus terrae HPL-003 chromosome, complete genomeABC transporter substrate-binding protein8e-1581.6
NC_008786:3681847:3690955369095536921061152Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 12e-1480.5
NC_008314:477722:5138795138795149041026Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, periplasmic component: POPT family2e-1480.5
NC_015559:1478114:1486459148645914876101152Marinomonas posidonica IVIA-Po-181 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-1479.3
NC_015276:2948923:2954973295497329561241152Marinomonas mediterranea MMB-1 chromosome, complete genomeextracellular solute-binding protein family 13e-1376.3
NC_006510:2044347:2055331205533120564371107Geobacillus kaustophilus HTA426, complete genomeABC transporter (substrate-binding protein)5e-1375.9
NC_007492:1193626:1214276121427612154271152Pseudomonas fluorescens PfO-1, complete genomeextracellular solute-binding protein, family 12e-1170.5
NC_020210:3341976:3355714335571433568021089Geobacillus sp. GHH01, complete genomespermidine/putrescine ABC transporter substrate-binding protein3e-1169.7
NC_009328:3322802:3336523333652333376141092Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter substrate-binding protein5e-1168.9
NC_002678:5060670:5076721507672150778361116Mesorhizobium loti MAFF303099, complete genomeABC transporter binding protein component7e-1168.6
NC_013858:416000:4519414519414530321092Azospirillum sp. B510 plasmid pAB510d, complete sequencespermidine/putrescine transport system substrate-binding protein2e-1066.6
NC_008054:1815723:1828034182803418290951062Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeSpermidine/putrescine ABC transporter, substrate binding protein9e-1064.7
NC_018000:1914945:1920839192083919219511113Sinorhizobium fredii USDA 257 chromosome, complete genomeABC transporter substrate-binding protein8e-0961.6
NC_009012:1901492:1919023191902319201291107Clostridium thermocellum ATCC 27405, complete genomeextracellular solute-binding protein, family 14e-0859.7
NC_002678:4885790:4911919491191949130251107Mesorhizobium loti MAFF303099, complete genomeABC transporter, binding protein component6e-0755.5
NC_013524:969038:9810049810049822211218Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeextracellular solute-binding protein family 11e-0654.7
NC_014122:967194:9842959842959853201026Methanocaldococcus infernus ME chromosome, complete genomeextracellular solute-binding protein family 11e-0654.7
NC_008391:1210451:1220047122004712210841038Burkholderia cepacia AMMD chromosome 2, complete sequenceABC spermidine/putrescine transporter, periplasmic ligand binding protein5e-0652.4