Pre_GI Gene

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Host: NC_009012 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009012:1901492 Clostridium thermocellum ATCC 27405, complete genome

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19014921902346855nitrogenase iron proteinQuickGO ontologyBLASTP
19026981903441744hypothetical protein
19041171904827711purine nucleoside phosphorylaseQuickGO ontologyBLASTP
190491019059771068basic membrane lipoproteinQuickGO ontologyBLASTP
190603219075761545hypothetical proteinBLASTP
19075791908421843Radical SAMQuickGO ontologyBLASTP
190848319100451563ABC transporter related proteinQuickGO ontologyBLASTP
191002019111381119inner-membrane translocatorQuickGO ontologyBLASTP
19111391912074936inner-membrane translocatorQuickGO ontologyBLASTP
19121561912572417cytidine deaminaseQuickGO ontologyBLASTP
19126291913297669deoxyribose-phosphate aldolaseQuickGO ontologyBLASTP
19135231914302780two component transcriptional regulator AraC familyQuickGO ontologyBLASTP
191429519160191725signal transduction histidine kinase LytSQuickGO ontologyBLASTP
191613019177851656binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
191778219188851104ABC transporter related proteinQuickGO ontologyBLASTP
191902319201291107extracellular solute-binding protein family 1QuickGO ontologyBLASTP
19204371920799363transcriptional repressor CopY familyQuickGO ontologyBLASTP
192080019230642265peptidase M56 BlaR1QuickGO ontologyBLASTP