Pre_GI: BLASTP Hits

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Query: NC_006155:3779381:3783316 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 3783316, End: 3792627, Length: 9312

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:3692321:3696277369627737056099333Yersinia pseudotuberculosis PB1/+, complete genomepore forming RTX toxin family protein05905
NC_009381:627685:6356696356696450019333Yersinia pestis Pestoides F chromosome, complete genomevirulence determinant05720
NC_005810:3964468:3972453397245339817859333Yersinia pestis biovar Microtus str. 91001, complete genomeputative virulence determinant05719
NC_004088:3661601:3665557366555736748899333Yersinia pestis KIM, complete genomehypothetical protein05718
NC_008149:3529428:3533384353338435427169333Yersinia pestis Nepal516, complete genomevirulence determinant05718
NC_008150:361224:3713313713313806639333Yersinia pestis Antiqua, complete genomeputative virulence determinant05718
NC_003143:1033500:1037479103747910468119333Yersinia pestis CO92, complete genomeputative virulence determinant05718
NC_014029:1001000:1009046100904610183789333Yersinia pestis Z176003 chromosome, complete genomeputative virulence determinant05718
NC_017160:945176:9531659531659624979333Yersinia pestis D182038 chromosome, complete genomeputative virulence determinant05718
NC_017168:50391:5846358463677959333Yersinia pestis A1122 chromosome, complete genomeputative virulence determinant05718
NC_017265:854492:8624778624778718099333Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative virulence determinant05710
NC_010465:933488:9415759415759509079333Yersinia pseudotuberculosis YPIII, complete genomevirulence determinant05707
NC_010159:138879:1441581441581534729315Yersinia pestis Angola, complete genomeputative phage minor structural protein05704
NC_017154:941065:9512089512089605229315Yersinia pestis D106004 chromosome, complete genomevirulence determinant05703
NC_009708:986918:99513299513210044469315Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage minor structural protein05697
NC_012751:594851:6143796143796170422664Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative RTX-family protein-44e-29132
NC_002505:1550108:15501081550108156378413677Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRTX toxin RtxA2e-28130
NC_016445:1027143:10271431027143104074413602Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRTX toxin RtxA2e-28130
NC_016944:1547176:15471761547176156081313638Vibrio cholerae IEC224 chromosome I, complete sequenceRTX toxin RtxA2e-28130
NC_008800:1459015:1467937146793714742696333Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative RTX-family protein2e-23113
NC_015224:3225000:3232254323225432385806327Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative RTX-family protein1e-22111
NC_012962:3499900:34999003499900351018910290Photorhabdus asymbiotica, complete genomeSimilar to RTX toxin RtxA8e-23111
NC_012962:3499900:35481233548123355871510593Photorhabdus asymbiotica, complete genomeSimilar to RTX toxin RtxA1e-19100
NC_012751:1071589:1075689107568910799784290Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative RTX-family protein-104e-1689.4
NC_015224:1514747:1526945152694515310934149Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative cytotoxin RtxA6e-1689
NC_012751:1538500:1549965154996515539123948Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative RTX-family protein-217e-1688.6