Pre_GI: BLASTP Hits

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Query: NC_005810:3333000:3361212 Yersinia pestis biovar Microtus str. 91001, complete genome

Start: 3361212, End: 3361985, Length: 774

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:522731:550850550850551623774Yersinia pestis Pestoides F chromosome, complete genomeflagellar assembly protein2e-122437
NC_003143:741169:770010770010770783774Yersinia pestis CO92, complete genomeputative flagellar assembly protein2e-122437
NC_008149:650706:678873678873679646774Yersinia pestis Nepal516, complete genomeflagellar assembly protein2e-122437
NC_009792:2688747:268874726887472689520774Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-76284
NC_010515:1618093:165436216543621655159798Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceflagellar biosynthetic protein FliR2e-30132
NC_004129:1848701:185379718537971854564768Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis protein1e-25117
NC_007492:1735595:173754017375401738325786Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis protein1e-25116
NC_010501:4080937:409588040958804096656777Pseudomonas putida W619, complete genomeflagellar biosynthetic protein FliR3e-25115
NC_017986:4374979:437995243799524380728777Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein FliR1e-24114
NC_009512:1691930:169690316969031697679777Pseudomonas putida F1, complete genomeflagellar biosynthetic protein FliR1e-24114
NC_002947:4931476:494658249465824947358777Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein2e-23109
NC_009654:3849774:387610238761023876884783Marinomonas sp. MWYL1, complete genomeflagellar biosynthetic protein FliR3e-23108
NC_013851:3300278:330354133035413304323783Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar biosynthetic protein FliR1e-1997.1
NC_019940:293476:300920300920301693774Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar biosynthetic protein FliR2e-1995.9
NC_014562:1844268:187554118755411876326786Pantoea vagans C9-1 chromosome, complete genomeFlagellar biosynthetic protein fliR5e-1788.2
NC_014366:1814000:183494918349491835728780Gamma proteobacterium HdN1, complete genomeFlagellar biosynthesis protein FliR6e-1787.8
NC_013892:2689645:269080526908052691587783Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar biosynthetic protein, regulator1e-1480.1
NC_020911:2921925:294200629420062942833828Octadecabacter antarcticus 307, complete genomeflagellar biosynthetic protein FliR3e-1375.5
NC_014328:1135854:1144086114408611459061821Clostridium ljungdahlii ATCC 49587 chromosome, complete genomebifunctional flagellar biosynthesis proteins FliR/FlhB4e-1272
NC_021184:2238500:225729222572922258059768Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliR6e-1271.2
NC_014366:2513352:251499225149922515783792Gamma proteobacterium HdN1, complete genomeType III secretory pathway protein7e-1271.2
NC_014377:1089894:108913310891331089897765Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar biosynthetic protein FliR1e-1170.5
NC_009253:2615777:261684126168412617608768Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar biosynthesis protein FliR4e-1168.6
NC_021182:2883716:2896408289640828982371830Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FlhB/flagellar biosynthetic protein FliR4e-1065.5
NC_010520:2860960:2860960286096028627891830Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar biosynthetic protein FliR/FlhB9e-1063.9
NC_009698:2649453:2649453264945326512821830Clostridium botulinum A str. Hall chromosome, complete genomebifunctional flagellar biosynthesis protein FliR/FlhB2e-0962.8
NC_009012:574145:595409595409596194786Clostridium thermocellum ATCC 27405, complete genometype III secretion system inner membrane R protein4e-0962
NC_015391:2059191:207640620764062077098693Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliR4e-0962
NC_013223:685628:707734707734708516783Desulfohalobium retbaense DSM 5692, complete genomeflagellar biosynthetic protein FliR3e-0962
NC_009802:1525144:155836215583621559123762Campylobacter concisus 13826, complete genomeflagellar biosynthetic protein FliR1e-0860.5
NC_008011:663958:669154669154669969816Lawsonia intracellularis PHE/MN1-00, complete genomeType III secretion component protein SctT1e-0860.1
NC_016894:2931213:293522829352282935983756Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar biosynthesis protein FliR2e-0859.7
NC_012791:2386000:240507724050772405796720Variovorax paradoxus S110 chromosome 1, complete genometype III secretion system inner membrane R protein3e-0858.9
NC_010723:833870:8508728508728527041833Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar biosynthetic protein6e-0858.2
NC_010674:858397:8725658725658744061842Clostridium botulinum B str. Eklund 17B, complete genomeflagellar biosynthetic protein5e-0858.2
NC_009664:533021:536377536377537201825Kineococcus radiotolerans SRS30216, complete genomeflagellar biosynthetic protein FliR1e-0757
NC_004344:26828:550395503955815777Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-0757
NC_007759:1356439:135849013584901359269780Syntrophus aciditrophicus SB, complete genomeflagellar biosynthetic protein3e-0755.8
NC_020409:168916:186269186269187060792Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFlagellar biosynthetic protein fliR3e-0755.5
NC_009617:4911595:4913794491379449156351842Clostridium beijerinckii NCIMB 8052 chromosome, complete genomebifunctional flagellar biosynthesis protein FliR/FlhB7e-0754.7
NC_012962:1189021:119456611945661195354789Photorhabdus asymbiotica, complete genometype iii secretion component protein sctt8e-0754.3
NC_014652:628435:650982650982651764783Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthetic protein flir2e-0653.1
NC_020291:4903981:4924711492471149265491839Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biosynthetic protein FlhB2e-0652.8
NC_008576:4701930:107331073311533801Magnetococcus sp. MC-1, complete genomeflagellar biosynthetic protein FliR5e-0651.6
NC_008346:983816:984925984925985686762Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeflagellar biosynthetic protein FliR7e-0651.2