Pre_GI: BLASTP Hits

Some Help

Query: NC_005126:1265071:1272392 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1272392, End: 1273027, Length: 636

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008835:1483237:1490464149046414919451482Burkholderia mallei NCTC 10229 chromosome I, complete sequenceISBma2, transposase4e-56217
NC_009079:2339756:2347842234784223493231482Burkholderia mallei NCTC 10247 chromosome I, complete sequenceISBma2, transposase4e-56217
NC_006349:2311817:2320526232052623219891464Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceISBma2, transposase4e-56217
NC_006349:1630514:1638104163810416395671464Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceISBma2, transposase4e-56217
NC_008835:2133696:2146968214696821484611494Burkholderia mallei NCTC 10229 chromosome I, complete sequenceISBma2, transposase4e-56217
NC_009079:705931:7192107192107206911482Burkholderia mallei NCTC 10247 chromosome I, complete sequenceISBma2, transposase5e-56217
NC_009074:1470689:1488625148862514901061482Burkholderia pseudomallei 668 chromosome I, complete sequenceTransposase and inactivated derivatives1e-55216
NC_020409:437781:4837134837134851701458Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completetransposase2e-46185
NC_014483:3339926:334373933437393344458720Paenibacillus polymyxa E681 chromosome, complete genomeTransposase2e-44178
NC_014335:1094000:110936511093651110180816Bacillus cereus biovar anthracis str. CI chromosome, completeIS660 transposase6e-42170
NC_005957:4680089:468225946822594682987729Bacillus thuringiensis serovar konkukian str. 97-27, completetransposase for IS6603e-41168
NC_014377:480158:4801584801584841173960Thermosediminibacter oceani DSM 16646 chromosome, complete genome2e-39162
NC_019897:1577015:1591916159191615932801365Thermobacillus composti KWC4 chromosome, complete genometransposase6e-39160
NC_014377:1985714:2007986200798620094611476Thermosediminibacter oceani DSM 16646 chromosome, complete genometransposase IS4 family protein2e-38159
NC_014377:1060000:1070638107063810721131476Thermosediminibacter oceani DSM 16646 chromosome, complete genometransposase IS4 family protein2e-38159
NC_014377:1227850:1245337124533712468121476Thermosediminibacter oceani DSM 16646 chromosome, complete genometransposase IS4 family protein1e-38159
NC_014377:1512217:1519425151942515209001476Thermosediminibacter oceani DSM 16646 chromosome, complete genometransposase IS4 family protein1e-38159
NC_014377:1985714:2001764200176420032391476Thermosediminibacter oceani DSM 16646 chromosome, complete genometransposase IS4 family protein1e-38159
NC_014377:1298806:1307821130782113092961476Thermosediminibacter oceani DSM 16646 chromosome, complete genometransposase IS4 family protein1e-38159
NC_014377:1985714:1992463199246319939381476Thermosediminibacter oceani DSM 16646 chromosome, complete genometransposase IS4 family protein1e-38159
NC_014377:1089894:1101845110184511033201476Thermosediminibacter oceani DSM 16646 chromosome, complete genometransposase IS4 family protein1e-38159
NC_014377:321949:3319933319933334681476Thermosediminibacter oceani DSM 16646 chromosome, complete genometransposase IS4 family protein1e-37155
NC_017095:1927118:1927118192711819286441527Fervidobacterium pennivorans DSM 9078 chromosome, complete genometransposase1e-36152
NC_017095:1757935:1768851176885117703351485Fervidobacterium pennivorans DSM 9078 chromosome, complete genometransposase1e-36152
NC_016935:1365463:140292614029261403411486Paenibacillus mucilaginosus 3016 chromosome, complete genometransposase IS4 family protein4e-36150
NC_008593:1513107:1533669153366915350931425Clostridium novyi NT, complete genomeISBma2, transposase4e-34144
NC_008593:555463:5569795569795584181440Clostridium novyi NT, complete genomeISBma2, transposase3e-33141
NC_016048:2167440:2169923216992321713771455Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element6e-33140
NC_016048:351205:3568023568023582561455Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element8e-33140
NC_016048:693416:7006727006727021261455Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element2e-32139
NC_008593:2457594:2459696245969624611351440Clostridium novyi NT, complete genomeISBma2, transposase2e-32139
NC_008593:1917118:1943526194352619449651440Clostridium novyi NT, complete genomeISBma2, transposase1e-32139
NC_008593:37456:5936759367608061440Clostridium novyi NT, complete genomeISBma2, transposase1e-32139
NC_008593:609723:6264666264666279051440Clostridium novyi NT, complete genomeISBma2, transposase1e-32139
NC_016048:456732:4578794578794593331455Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element3e-32138
NC_016048:2678205:2707526270752627089771452Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element1e-30132
NC_008024:572916:592933592933593754822Streptococcus pyogenes MGAS10750, complete genomeTransposase1e-27122
NC_013385:1007616:1020398102039810220711674Ammonifex degensii KC4, complete genometransposase IS4 family protein4e-1787.8
NC_003552:1234712:1246905124690512483891485Methanosarcina acetivorans C2A, complete genometransposase2e-1685.5
NC_002737:1670164:1680888168088816820931206Streptococcus pyogenes M1 GAS, complete genomeIS1562 transposase3e-1685.1
NC_012891:1100726:1118420111842011196191200Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,transposase4e-1684.7
NC_009050:212270:2768072768072781891383Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencetransposase, IS4 family protein4e-1684.7
NC_020453:7826358:7846974784697478483261353Agromonas oligotrophica S58 DNA, complete genometransposase IS4 family protein6e-1580.9
NC_018515:3865522:3865522386552238669491428Desulfosporosinus meridiei DSM 13257 chromosome, complete genometransposase8e-1580.5
NC_015425:2144639:2174964217496421762831320Clostridium botulinum BKT015925 chromosome, complete genomeISBma2, transposase3e-1478.6
NC_010514:6000:2045920459218321374Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, complete3e-1375.5
NC_021182:4829000:4841785484178548432361452Clostridium pasteurianum BC1, complete genometransposase8e-1373.6
NC_009720:622262:6295886295886309641377Xanthobacter autotrophicus Py2, complete genometransposase IS4 family protein9e-1373.6
NC_011894:6731115:6732889673288967342711383Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein2e-1272.8
NC_011894:983572:1002643100264310040251383Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein2e-1272.8
NC_010424:825117:8251178251178268501734Candidatus Desulforudis audaxviator MP104C, complete genometransposase, IS4 family protein2e-1272
NC_008262:227354:2277702277702293351566Clostridium perfringens SM101, complete genomeISCpe5, transposase6e-1270.9
NC_007005:98488:1049511049511063691419Pseudomonas syringae pv. syringae B728a, complete genomeTransposase, IS46e-1270.9
NC_015425:2144639:2182910218291021841061197Clostridium botulinum BKT015925 chromosome, complete genomeISBma2, transposase5e-1270.9
NC_014657:1775929:1784713178471317865391827Caldicellulosiruptor owensensis OL chromosome, complete genometransposase is4 family protein2e-1168.9
NC_015572:3091707:3116765311676531182761512Methylomonas methanica MC09 chromosome, complete genometransposase IS4 family protein3e-1168.6
NC_015572:65597:8760187601891121512Methylomonas methanica MC09 chromosome, complete genometransposase IS4 family protein3e-1168.6
NC_017167:1648913:1748962174896217503951434Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein2e-1065.9
NC_015577:1974821:1983757198375719852951539Treponema azotonutricium ZAS-9 chromosome, complete genometransposase, IS4 family protein2e-1065.9
NC_015577:3776295:3781146378114637826841539Treponema azotonutricium ZAS-9 chromosome, complete genometransposase, IS4 family protein2e-1065.9
NC_016048:375676:3824683824683837241257Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element3e-1065.5
NC_015580:2444845:2448919244891924502831365Novosphingobium sp. PP1Y, complete genome3e-1065.1
NC_015577:1682970:1690170169017016914441275Treponema azotonutricium ZAS-9 chromosome, complete genome3e-1065.1
NC_016048:308342:3146793146793159351257Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element4e-1064.7
NC_016048:2907702:2989988298998829913161329Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element4e-1064.7
NC_015172:237397:255651255651256307657Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome4e-1064.7
NC_020164:2329340:2348085234808523497611677Staphylococcus warneri SG1, complete genomeIS1272 transposase6e-1064.3
NC_011365:1171536:1180468118046811818441377Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genometransposase IS1182 family protein6e-1064.3
NC_020164:2219612:2223900222390022256301731Staphylococcus warneri SG1, complete genomeIS1272 transposase6e-1063.9
NC_007168:195638:1978831978831995831701Staphylococcus haemolyticus JCSC1435, complete genomeIS1272 transposase6e-1063.9
NC_007168:1923723:1941999194199919436991701Staphylococcus haemolyticus JCSC1435, complete genomeIS1272 transposase7e-1063.9
NC_020156:3670500:3680407368040736819631557Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase8e-1063.9
NC_007492:3180480:3218775321877532201931419Pseudomonas fluorescens PfO-1, complete genomeTransposase, IS41e-0963.5
NC_007168:454000:4721854721854738731689Staphylococcus haemolyticus JCSC1435, complete genomeIS1272 transposase9e-1063.5
NC_020156:3670500:3670559367055936721151557Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase3e-0961.6
NC_020156:3050423:3058082305808230596381557Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase3e-0961.6
NC_003552:1234712:125420912542091254745537Methanosarcina acetivorans C2A, complete genometransposase3e-0961.6
NC_020156:3050423:3061281306128130628371557Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase5e-0961.2
NC_020156:3050423:3054257305425730557501494Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase5e-0961.2
NC_015844:3779500:3781254378125437828311578Zobellia galactanivorans, complete genometransposase, family 116e-0960.8
NC_017342:1254000:1272885127288512745311647Staphylococcus aureus subsp. aureus TCH60 chromosome, completeIS1272 transposase6e-0960.8
NC_003552:3479000:3493235349323534948301596Methanosarcina acetivorans C2A, complete genomehypothetical protein8e-0960.5
NC_015578:3309531:331856633185663319213648Treponema primitia ZAS-2 chromosome, complete genome9e-0960.5
NC_015578:247266:284522284522285469948Treponema primitia ZAS-2 chromosome, complete genome9e-0960.1
NC_009956:88354:1005221005221019041383Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequencetransposase IS4 family protein9e-0960.1
NC_020156:3670500:367741236774123678155744Nonlabens dokdonensis DSW-6, complete genomeISCps6, transposase1e-0860.1
NC_006582:3949832:396739039673903967719330Bacillus clausii KSM-K16, complete genometransposase fragment1e-0859.7
NC_015850:169180:1758881758881772821395Acidithiobacillus caldus SM-1 chromosome, complete genomeputative transposase1e-0859.7
NC_004461:73390:7577975779774401662Staphylococcus epidermidis ATCC 12228, complete genometruncated transposase2e-0859.3
NC_008435:1215437:1299783129978313016331851Rhodopseudomonas palustris BisA53, complete genometransposase, mutator type2e-0859.3
NC_014539:743523:7566597566597580741416Burkholderia sp. CCGE1003 chromosome 1, complete sequencetransposase IS4 family protein2e-0859.3
NC_009921:4186000:4194350419435041960261677Frankia sp. EAN1pec, complete genometransposase IS4 family protein2e-0858.9
NC_014934:244587:2578332578332592991467Cellulophaga algicola DSM 14237 chromosome, complete genome3e-0858.9
NC_014623:4683671:4696445469644546980611617Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase, is4-like protein5e-0857.8
NC_010725:4035397:4071817407181740732531437Methylobacterium populi BJ001, complete genometransposase IS4 family protein1e-0756.6
NC_007802:1240989:125324312532431253872630Jannaschia sp. CCS1, complete genometransposase, IS41e-0756.6
NC_009434:608765:6434746434746449041431Pseudomonas stutzeri A1501, complete genomehypothetical protein2e-0755.8
NC_020829:940692:9607179607179621531437Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-0755.8
NC_020541:4122852:4160409416040941619231515Rhodanobacter sp. 2APBS1, complete genometransposase3e-0755.5
NC_004663:44647:668566685667662807Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein3e-0755.5
NC_004578:1719849:1728650172865017301101461Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy6, transposase3e-0755.5
NC_004578:4204235:4217893421789342193531461Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPsy6, transposase2e-0755.5
NC_011894:5056901:5078916507891650803221407Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein9e-0753.5
NC_011894:3029964:3051949305194930533551407Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein9e-0753.5
NC_019902:2306961:2308559230855923100611503Thioalkalivibrio nitratireducens DSM 14787, complete genomeISPsy6, transposase9e-0753.5
NC_002516:1474000:1481334148133414827581425Pseudomonas aeruginosa PAO1, complete genomehypothetical protein1e-0653.5
NC_012914:4238142:4243847424384742453971551Paenibacillus sp. JDR-2, complete genometransposase IS4 family protein1e-0653.1
NC_015856:268034:2745272745272759661440Collimonas fungivorans Ter331 chromosome, complete genometransposase1e-0653.1
NC_008148:2290806:2297664229766422993941731Rubrobacter xylanophilus DSM 9941, complete genometransposase, IS42e-0652.4
NC_011894:6516856:6535052653505265367131662Methylobacterium nodulans ORS 2060, complete genometransposase IS4 family protein2e-0652.4
NC_009339:252174:2586312586312601781548Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequencetransposase, IS4 family protein4e-0651.6
NC_012791:4736084:4748063474806347495111449Variovorax paradoxus S110 chromosome 1, complete genometransposase IS4 family protein5e-0651.2
NC_015690:7785875:7804411780441178058621452Paenibacillus mucilaginosus KNP414 chromosome, complete genometransposase IS4 family protein6e-0650.8
NC_015690:3941113:3953917395391739553681452Paenibacillus mucilaginosus KNP414 chromosome, complete genometransposase IS4 family protein6e-0650.8
NC_015690:1348691:1354227135422713556781452Paenibacillus mucilaginosus KNP414 chromosome, complete genometransposase IS4 family protein6e-0650.8
NC_015957:5109902:5120226512022651218001575Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase IS4 family protein9e-0650.4