Pre_GI Gene

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Host: NC_015957 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:5109902 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
510990251109541053fatty acid desaturaseQuickGO ontologyBLASTP
51133475113493147hypothetical proteinBLASTP
511350651146691164hypothetical proteinBLASTP
51146665114995330XRE family transcriptional regulatorQuickGO ontologyBLASTP
511499251160711080integrase family proteinQuickGO ontologyBLASTP
51165305116913384hypothetical proteinBLASTP
511691351183521440peptidase C14 caspase catalytic subunit p20QuickGO ontologyBLASTP
51184475118557111hypothetical proteinBLASTP
512022651218001575transposase IS4 family proteinQuickGO ontologyBLASTP
512417051254561287transposase mutator typeQuickGO ontologyBLASTP
51255665126180615regulatory proteinQuickGO ontologyBLASTP
51262455126946702hypothetical protein
51269225127167246hypothetical protein
51276815128268588hypothetical proteinBLASTP