Pre_GI: BLASTP Hits

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Query: NC_004578:6334735:6350829 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 6350829, End: 6352334, Length: 1506

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007575:319119:3236653236653255871923Sulfurimonas denitrificans DSM 1251, complete genomesulfatase2e-102373
NC_020541:268406:2723242723242745342211Rhodanobacter sp. 2APBS1, complete genomephosphoglycerol transferase family protein, alkaline phosphatase superfamily8e-95347
NC_009441:3597020:3615467361546736174251959Flavobacterium johnsoniae UW101 chromosome, complete genomesulfatase1e-91337
NC_009052:144619:1585861585861605501965Shewanella baltica OS155, complete genomesulfatase1e-54214
NC_002940:1065246:1078607107860710805681962Haemophilus ducreyi 35000HP, complete genomehypothetical protein6e-51202
NC_007575:319119:3215553215553234951941Sulfurimonas denitrificans DSM 1251, complete genomesulfatase1e-31137
NC_002950:2098454:2113011211301121149421932Porphyromonas gingivalis W83, complete genomehypothetical protein2e-1997.4
NC_015571:290355:3093173093173112481932Porphyromonas gingivalis TDC60, complete genomeputative sulfatase2e-1894.4
NC_004129:4434259:4448721444872144508142094Pseudomonas fluorescens Pf-5, complete genomesulfatase family protein4e-1789.7
NC_019968:1304450:1339000133900013408531854Prevotella dentalis DSM 3688 chromosome 2, complete sequencephosphoglycerol transferase family protein, alkaline phosphatase superfamily9e-1788.6
NC_015172:850802:8697618697618715901830Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomesulfatase1e-1378.6
NC_005363:1604337:1605815160581516076441830Bdellovibrio bacteriovorus HD100, complete genomephosphoglycerol transferase5e-1272.8
NC_015975:752927:7554887554887575482061Lactobacillus ruminis ATCC 27782 chromosome, complete genomeSulfatase family protein4e-1170.1
NC_010723:3395187:3397359339735933991791821Clostridium botulinum E3 str. Alaska E43, complete genomesulfatase family protein1e-1068.6
NC_014106:419511:4395864395864416462061Lactobacillus crispatus ST1, complete genomeSulfatase4e-1066.6
NC_013198:1095591:1096422109642210986802259Lactobacillus rhamnosus GG, complete genomephosphoglycerol transferase related protein, alkaline phosphatase superfamily7e-1065.9
NC_015602:117939:1365591365591386192061Lactobacillus kefiranofaciens ZW3 chromosome, complete genomephosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase1e-0965.5
NC_014724:439594:4622804622804643402061Lactobacillus amylovorus GRL 1112 chromosome, complete genomeSulfatase2e-0964.3
NC_015214:437733:4620294620294640892061Lactobacillus acidophilus 30SC chromosome, complete genomeSulfatase2e-0964.3
NC_009012:75000:9396593965958541890Clostridium thermocellum ATCC 27405, complete genomesulfatase4e-0963.2
NC_019842:710308:7265227265227284501929Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein8e-0962.4
NC_009725:692237:7368167368167387441929Bacillus amyloliquefaciens FZB42, complete genomeYfnI8e-0962.4
NC_008497:1498430:1506765150676515088222058Lactobacillus brevis ATCC 367, complete genomePhosphoglycerol transferase related protein, alkaline phosphatase superfamily7e-0962.4
NC_020291:6216000:6220063622006362219491887Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomesulfatase family protein1e-0861.6
NC_015978:996933:1012245101224510142361992Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeglycerol phosphate lipoteichoic acid synthase 11e-0861.6
NC_003366:728859:7531277531277549351809Clostridium perfringens str. 13, complete genomehypothetical protein2e-0861.2
NC_003366:2556457:2558205255820525600941890Clostridium perfringens str. 13, complete genomehypothetical protein2e-0860.8
NC_008261:2770468:2772216277221627741051890Clostridium perfringens ATCC 13124, complete genomesulfatase2e-0860.8
NC_018528:446610:4680654680654701222058Lactobacillus helveticus R0052 chromosome, complete genomephosphoglycerol transferase2e-0860.8
NC_008262:2433979:2435726243572624376091884Clostridium perfringens SM101, complete genomesulfatase2e-0860.8
NC_010080:445398:4623634623634644202058Lactobacillus helveticus DPC 4571, complete genomeputative phosphoglycerol transferase3e-0860.5
NC_007929:428743:4324524324524345212070Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSulfatase family protein4e-0860.1
NC_008261:676000:7004377004377022451809Clostridium perfringens ATCC 13124, complete genomesulfatase family protein5e-0859.7
NC_008530:1551356:1567918156791815699872070Lactobacillus gasseri ATCC 33323, complete genomePhosphoglycerol transferase related protein, alkaline phosphatase superfamily6e-0859.3
NC_013504:1468227:1481697148169714837662070Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein9e-0858.9
NC_005362:1651767:1671938167193816739291992Lactobacillus johnsonii NCC 533, complete genomehypothetical protein1e-0758.5
NC_015428:1668465:1680757168075716828202064Lactobacillus buchneri NRRL B-30929 chromosome, complete genomesulfatase1e-0758.2
NC_010723:420025:4424574424574443071851Clostridium botulinum E3 str. Alaska E43, complete genomesulfatase1e-0654.7
NC_010674:426256:4475034475034493531851Clostridium botulinum B str. Eklund 17B, complete genomesulfatase3e-0653.9
NC_010688:449649:4703884703884724962109Xanthomonas campestris pv. campestris, complete genomephosphoglycerol transferase I6e-0652.8
NC_010674:3581044:3582757358275735845711815Clostridium botulinum B str. Eklund 17B, complete genomesulfatase family protein9e-0652.4