Pre_GI: BLASTP Hits

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Query: NC_004578:4781326:4798755 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4798755, End: 4800578, Length: 1824

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003910:3448983:3464423346442334662551833Colwellia psychrerythraea 34H, complete genomeglutathione-regulated potassium-efflux system protein KefC4e-95349
NC_009049:1125681:1125681112568111276091929Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencesodium/hydrogen exchanger4e-89329
NC_012918:3203136:3211097321109732130101914Geobacter sp. M21 chromosome, complete genomepotassium efflux system protein2e-85317
NC_017059:2771085:2792862279286227947781917Rhodospirillum photometricum DSM 122, complete genomeGlutathione-regulated potassium-efflux system protein KefB12e-79297
NC_007508:4765751:4768789476878947706061818Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeglutathione-regulated potassium-efflux protein C6e-77288
NC_011071:1877500:1877587187758718794191833Stenotrophomonas maltophilia R551-3, complete genomepotassium efflux system protein7e-77288
NC_010943:2091199:2091199209119920930311833Stenotrophomonas maltophilia K279a, complete genomeputative sodium/hydrogen exchanger TrkA-N domain transmembrane transport protein1e-76287
NC_009668:1591290:1591290159129015930831794Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencepotassium efflux system protein1e-73277
NC_008228:1404126:1405719140571914074761758Pseudoalteromonas atlantica T6c, complete genomepotassium efflux system protein3e-71270
NC_010510:139685:1437921437921455581767Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completepotassium efflux system protein7e-71268
NC_012808:58701:8314083140849061767Methylobacterium extorquens AM1, complete genomepotassium:proton antiporter (CPA2 family)6e-69262
NC_011757:97281:1240771240771258431767Methylobacterium chloromethanicum CM4, complete genomepotassium efflux system protein1e-68261
NC_007492:3954345:3991840399184039936481809Pseudomonas fluorescens PfO-1, complete genomePotassium efflux system protein4e-68259
NC_006142:994753:1019745101974510214721728Rickettsia typhi str. Wilmington, complete genomeglutathione-regulated potassium-efflux system5e-57223
NC_017062:996197:1021189102118910229161728Rickettsia typhi str. B9991CWPP chromosome, complete genomeglutathione-regulated potassium-efflux system5e-57223
NC_017066:995629:1020621102062110223481728Rickettsia typhi str. TH1527 chromosome, complete genomeglutathione-regulated potassium-efflux system5e-57223
NC_000963:995500:1020382102038210221091728Rickettsia prowazekii str. Madrid E, complete genomeGLUTATHIONE-REGULATED POTASSIUM-EFFLUX SYSTEM PROTEIN KEFB (kefB)4e-57223
NC_017048:225980:2508052508052525321728Rickettsia prowazekii str. GvV257 chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)4e-57223
NC_017049:993863:1018651101865110203781728Rickettsia prowazekii str. Chernikova chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)4e-57223
NC_017050:995500:1020301102030110220281728Rickettsia prowazekii str. Katsinyian chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)4e-57223
NC_017051:993000:1017894101789410196211728Rickettsia prowazekii str. Dachau chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)4e-57223
NC_017056:995500:1020292102029210220191728Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)4e-57223
NC_017057:996000:1020959102095910226861728Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeglutathione-regulated potassium-efflux system protein KEFB (kefB)4e-57223
NC_009881:1099479:1126654112665411283811728Rickettsia akari str. Hartford, complete genomeglutathione-regulated potassium-efflux system protein kefB2e-56221
NC_017058:283738:2837382837382854651728Rickettsia australis str. Cutlack chromosome, complete genomeglutathione-regulated potassium-efflux system protein kefB3e-54213
NC_015731:2460248:2492230249223024942121983Nitrosomonas sp. Is79A3 chromosome, complete genomepotassium efflux system protein4e-49196
NC_008825:4025705:4028098402809840301402043Methylibium petroleiphilum PM1, complete genomesodium/hydrogen exchanger family protein1e-47191
NC_014166:1809052:1827861182786118295731713Arcobacter nitrofigilis DSM 7299 chromosome, complete genomesodium/hydrogen exchanger1e-46188
NC_013855:892657:9043019043019059981698Azospirillum sp. B510 plasmid pAB510a, complete sequencemonovalent cation:H+ antiporter-2, CPA2 family2e-44180
NC_007908:4677856:4704535470453547065051971Rhodoferax ferrireducens T118, complete genomesodium/hydrogen exchanger1e-41171
NC_017223:2618535:2620455262045526216811227Bordetella pertussis CS chromosome, complete genomeputative membrane efflux protein6e-40166
NC_002927:4130697:4133621413362141348471227Bordetella bronchiseptica RB50, complete genomeputative membrane efflux protein6e-40166
NC_002929:2589202:2595819259581925970451227Bordetella pertussis Tohama I, complete genomeputative membrane efflux protein6e-40166
NC_018876:2403892:2430658243065824326822025Methanolobus psychrophilus R15 chromosome, complete genomesodium/hydrogen exchanger2e-39164
NC_002928:3715492:3718416371841637196961281Bordetella parapertussis 12822, complete genomeputative membrane efflux protein8e-39162
NC_009720:5046861:5046861504686150485971737Xanthobacter autotrophicus Py2, complete genomesodium/hydrogen exchanger2e-37157
NC_003552:3862275:3862878386287838648631986Methanosarcina acetivorans C2A, complete genomeglutathione-regulated potassium-efflux system protein3e-36153
NC_012559:1888000:1909233190923319112271995Laribacter hongkongensis HLHK9, complete genomeKefB6e-36152
NC_007955:1523500:1536106153610615380161911Methanococcoides burtonii DSM 6242, complete genomesodium/hydrogen exchanger2e-34147
NC_008942:1198000:1213839121383912158872049Methanocorpusculum labreanum Z, complete genomehypothetical protein5e-32139
NC_009485:8138314:8178555817855581800841530Bradyrhizobium sp. BTAi1 chromosome, complete genomeglutathione-regulated potassium-efflux system protein kefC1e-30135
NC_011146:603429:6122496122496140031755Geobacter bemidjiensis Bem, complete genomesodium/hydrogen exchanger6e-29129
NC_014935:31020:3325533255348771623Nitratifractor saLSUginis DSM 16511 chromosome, complete genomesodium/hydrogen exchanger3e-25117
NC_017265:3240379:3244107324410732457981692Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative transporter with NAD(P)-binding Rossmann-fold domain1e-22108
NC_009708:3411153:3414538341453834162291692Yersinia pseudotuberculosis IP 31758 chromosome, complete genomecation:proton antiport protein2e-22108
NC_017168:2281040:2309861230986123115521692Yersinia pestis A1122 chromosome, complete genomeputative cation:proton antiport protein2e-22107
NC_009667:1934818:1955369195536919572161848Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencepotassium efflux system protein2e-22107
NC_006155:1191307:1220077122007712217681692Yersinia pseudotuberculosis IP 32953, complete genomeCPA2 family K+/H+ antiporter, CAMP induced rosB subunit2e-22107
NC_008149:1122693:1152734115273411544251692Yersinia pestis Nepal516, complete genomepotassium antiporter2e-22107
NC_005810:872672:9013939013939030841692Yersinia pestis biovar Microtus str. 91001, complete genomeputative cation:proton antiport protein2e-22107
NC_008150:2878450:2882179288217928838701692Yersinia pestis Antiqua, complete genomeputative potassium antiporter2e-22107
NC_010634:1175404:1202620120262012043111692Yersinia pseudotuberculosis PB1/+, complete genomepotassium efflux system protein2e-22107
NC_004088:1196875:1223560122356012252511692Yersinia pestis KIM, complete genomepotassium efflux protein2e-22107
NC_017154:3444497:3447883344788334495741692Yersinia pestis D106004 chromosome, complete genomeputative potassium antiporter2e-22107
NC_014029:3501500:3504918350491835066091692Yersinia pestis Z176003 chromosome, complete genomeputative potassium antiporter2e-22107
NC_009381:3094939:3098667309866731003581692Yersinia pestis Pestoides F chromosome, complete genomeputative cation:proton antiport protein2e-22107
NC_010465:3465351:3469447346944734711381692Yersinia pseudotuberculosis YPIII, complete genomepotassium efflux system protein2e-22107
NC_003143:3446740:3450514345051434522051692Yersinia pestis CO92, complete genomeputative potassium antiporter2e-22107
NC_010159:1288000:1314919131491913166071689Yersinia pestis Angola, complete genometransporter, monovalent cation:proton antiporter-2 (CPA2) family5e-22106
NC_017160:3426486:3429872342987234315601689Yersinia pestis D182038 chromosome, complete genomepotassium antiporter5e-22106
NC_008800:3330944:3335753333575333374441692Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative cation:proton antiport protein2e-21104
NC_015224:1391088:1411435141143514131261692Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative cation:proton antiport protein2e-21104
NC_008554:4781500:4796449479644947984071959Syntrophobacter fumaroxidans MPOB, complete genomesodium/hydrogen exchanger5e-21103
NC_009659:1050532:1076591107659110783181728Janthinobacterium sp. Marseille chromosome, complete genomeglutathione-regulated potassium-efflux system protein kefB1e-20101
NC_008048:389645:3997853997854014821698Sphingopyxis alaskensis RB2256, complete genomesodium/hydrogen exchanger1e-1792
NC_011894:5056901:5057500505750050593231824Methylobacterium nodulans ORS 2060, complete genomepotassium efflux system protein3e-1790.9
NC_008781:654289:6703426703426720601719Polaromonas naphthalenivorans CJ2, complete genomesodium/hydrogen exchanger3e-1790.5
NC_015682:205900:2393212393212413422022Thermodesulfobacterium sp. OPB45 chromosome, complete genomesodium/hydrogen exchanger2e-1687.4
NC_010511:5424004:5427327542732754291501824Methylobacterium sp. 4-46 chromosome, complete genomepotassium efflux system protein8e-1685.9
NC_006351:1631760:1651782165178216535331752Burkholderia pseudomallei K96243 chromosome 2, complete sequenceefflux pump/antiporter8e-1685.9
NC_015259:673662:6994446994447006221179Polymorphum gilvum SL003B-26A1 chromosome, complete genomeSodium/hydrogen exchanger2e-1480.9
NC_008609:3921113:3924156392415639258111656Pelobacter propionicus DSM 2379, complete genomesodium/hydrogen exchanger4e-1377
NC_014323:3976351:3977123397712339788861764Herbaspirillum seropedicae SmR1 chromosome, complete genomeKef-type K+ transport system, membrane component protein2e-1171.6
NC_007963:1190847:1241345124134512430331689Chromohalobacter salexigens DSM 3043, complete genomesodium/hydrogen exchanger1e-1068.6
NC_015389:2030154:2030154203015420322262073Coriobacterium glomerans PW2 chromosome, complete genomesodium/hydrogen exchanger2e-1068.2
NC_007645:6955479:6964607696460769663221716Hahella chejuensis KCTC 2396, complete genomeKef-type K+ transport system, predicted NAD-binding component8e-1065.9
NC_007644:1847000:184865818486581849326669Moorella thermoacetica ATCC 39073, complete genomeTrkA5e-0963.2
NC_014355:844248:8442488442488459841737Candidatus Nitrospira defluvii, complete genomemonovalent cation:proton antiporter8e-0962.8
NC_018679:2412000:2413694241369424152651572Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeputative glutathione-regulated potassium-efflux system protein1e-0862.4
NC_019978:2293327:230466623046662305331666Halobacteroides halobius DSM 5150, complete genomeK+ transport system, NAD-binding component1e-0655.1
NC_007511:1300978:1306824130682413079841161Burkholderia sp. 383 chromosome 2, complete sequenceTrkA-like protein5e-0653.5
NC_012704:1747539:1751366175136617525081143Corynebacterium kroppenstedtii DSM 44385, complete genometransport protein of the voltage-gated ion channel superfamily6e-0653.1