Pre_GI: BLASTP Hits

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Query: NC_004547:1062410:1062410 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1062410, End: 1063174, Length: 765

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:1143500:115253411525341153298765Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF812e-103375
NC_015733:3736104:373949737394973740327831Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-31136
NC_008027:2331617:235545623554562356217762Pseudomonas entomophila L48, complete genomehypothetical protein2e-31135
NC_013959:1555799:157281115728111573578768Sideroxydans lithotrophicus ES-1 chromosome, complete genomeprotein of unknown function DUF812e-29129
NC_003919:5056650:508042750804275081206780Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein8e-29127
NC_015556:2265940:227547522754752276242768Pseudomonas fulva 12-X chromosome, complete genomeprotein of unknown function DUF811e-27123
NC_015379:4630367:463117146311714631935765Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein, putative membrane protein4e-27121
NC_015437:697051:697051697051697809759Selenomonas sputigena ATCC 35185 chromosome, complete genomeprotein of unknown function DUF819e-1890.5
NC_014210:2638773:263961626396162640383768Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF811e-1790.5
NC_017068:130226:132382132382133146765Selenomonas ruminantium subsp. lactilytica TAM6421, completemembrane protein3e-1789
NC_015276:1037862:104442710444271045206780Marinomonas mediterranea MMB-1 chromosome, complete genomeprotein of unknown function DUF811e-1687
NC_010572:5445081:546529154652915466085795Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-1686.7
NC_016779:312500:318945318945319715771Bacillus cereus F837/76 chromosome, complete genomehypothetical protein4e-1685.1
NC_010674:3674739:367944636794463680195750Clostridium botulinum B str. Eklund 17B, complete genometransporter6e-1684.3
NC_010723:3530000:353662735366273537376750Clostridium botulinum E3 str. Alaska E43, complete genometransporter1e-1583.2
NC_017200:345502:351091351091351861771Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein2e-1582.4
NC_013416:1526920:153955315395531540320768Aggregatibacter actinomycetemcomitans D11S-1, complete genomeinner membrane protein YfcA1e-1377
NC_016513:1859767:187470318747031875470768Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeinner membrane protein YfcA1e-1377
NC_015677:285896:302473302473303231759Ramlibacter tataouinensis TTB310 chromosome, complete genomemembrane protein1e-1376.6
NC_007164:622000:652500652500653294795Corynebacterium jeikeium K411, complete genomehypothetical protein1e-1170.5
NC_002505:2537655:254839525483952549180786Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-1169.7
NC_009457:2095366:210162721016272102412786Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-1169.7
NC_012578:2479150:248541124854112486196786Vibrio cholerae M66-2 chromosome I, complete sequenceputative Inner membrane protein2e-1169.7
NC_012582:2626786:263304726330472633832786Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative Inner membrane protein2e-1169.7
NC_012668:1036000:104548610454861046271786Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-1169.7
NC_016445:2012294:201855220185522019337786Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein2e-1169.7
NC_016944:2588435:259469325946932595478786Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-1169.7
NC_010644:231486:234531234531235283753Elusimicrobium minutum Pei191, complete genomehypothetical protein3e-1169.3
NC_019908:852230:869858869858870625768Brachyspira pilosicoli P43/6/78 chromosome, complete genometransporter membrane3e-1168.9
NC_014330:2409559:240955924095592410326768Brachyspira pilosicoli 95/1000 chromosome, complete genometransporter membrane3e-1168.9
NC_020209:945000:952807952807953370564Pseudomonas poae RE*1-1-14, complete genomehypothetical protein5e-1168.2
NC_014815:5603000:561002456100245610743720Micromonospora sp. L5 chromosome, complete genomehypothetical protein2e-1066.6
NC_014012:3356629:337150033715003372273774Shewanella violacea DSS12, complete genomehypothetical protein2e-1066.6
NC_012668:1623350:165034316503431651119777Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-1065.9
NC_012779:2619871:262328626232862624086801Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-1065.5
NC_014391:3596812:361355136135513614270720Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein1e-0963.5
NC_008577:3125675:314095731409573141730774Shewanella sp. ANA-3 chromosome 1, complete sequenceprotein of unknown function DUF812e-0962.8
NC_008321:2922000:294043429404342941207774Shewanella sp. MR-4, complete genomeprotein of unknown function DUF814e-0962
NC_015434:3581001:359625935962593597038780Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein1e-0860.5
NC_012125:1360593:138650113865011387310810Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-0860.1
NC_008322:2983951:300111730011173001890774Shewanella sp. MR-7, complete genomeprotein of unknown function DUF812e-0859.7
NC_009092:2902171:292448029244802925253774Shewanella loihica PV-4, complete genomeprotein of unknown function DUF815e-0858.2
NC_011663:3181579:320260832026083203381774Shewanella baltica OS223 chromosome, complete genomehypothetical protein3e-0755.8
NC_012988:4633930:463860746386074639398792Methylobacterium extorquens DM4, complete genomehypothetical protein1e-0653.9
NC_010172:4185904:419190041919004192691792Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF811e-0653.9
NC_011757:4293000:429544942954494296240792Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF812e-0653.1
NC_012808:4235567:424024642402464241037792Methylobacterium extorquens AM1, complete genomehypothetical protein3e-0652.4