Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:4434259:4455970 Pseudomonas fluorescens Pf-5, complete genome

Start: 4455970, End: 4456512, Length: 543

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:4065625:406562540656254066161537Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-40164
NC_005810:4306716:430671643067164307252537Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-40164
NC_008150:4373722:437372243737224374258537Yersinia pestis Antiqua, complete genomehypothetical protein3e-40164
NC_003143:398748:417807417807418343537Yersinia pestis CO92, complete genomehypothetical protein3e-40164
NC_004088:4202247:420224742022474202783537Yersinia pestis KIM, complete genomehypothetical protein3e-40164
NC_008149:318860:337015337015337551537Yersinia pestis Nepal516, complete genomehypothetical protein3e-40164
NC_009381:3680638:368063836806383681174537Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-40164
NC_014029:452248:471307471307471843537Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-40164
NC_017154:394401:413459413459413995537Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-40164
NC_017160:396600:415659415659416195537Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-40164
NC_017168:687471:687471687471688007537Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-40164
NC_004431:1211000:122089512208951221437543Escherichia coli CFT073, complete genomehypothetical protein3e-29127