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Query: NC_004129:4434259:4455970 Pseudomonas fluorescens Pf-5, complete genome

Start: 4455970, End: 4456512, Length: 543

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:4065625:406562540656254066161537Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-40164
NC_005810:4306716:430671643067164307252537Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-40164
NC_008150:4373722:437372243737224374258537Yersinia pestis Antiqua, complete genomehypothetical protein3e-40164
NC_003143:398748:417807417807418343537Yersinia pestis CO92, complete genomehypothetical protein3e-40164
NC_004088:4202247:420224742022474202783537Yersinia pestis KIM, complete genomehypothetical protein3e-40164
NC_008149:318860:337015337015337551537Yersinia pestis Nepal516, complete genomehypothetical protein3e-40164
NC_009381:3680638:368063836806383681174537Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-40164
NC_014029:452248:471307471307471843537Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-40164
NC_017154:394401:413459413459413995537Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-40164
NC_017160:396600:415659415659416195537Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-40164
NC_017168:687471:687471687471688007537Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-40164
NC_004431:1211000:122089512208951221437543Escherichia coli CFT073, complete genomehypothetical protein3e-29127