Pre_GI: BLASTP Hits

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Query: NC_004129:1014986:1033091 Pseudomonas fluorescens Pf-5, complete genome

Start: 1033091, End: 1034032, Length: 942

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007963:2777066:277822227782222779169948Chromohalobacter salexigens DSM 3043, complete genomeAuxin Efflux Carrier2e-92339
NC_012917:3378759:339316433931643394123960Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeAuxin Efflux Carrier3e-48192
NC_018868:3036205:306405430640543065019966Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein5e-42171
NC_015460:418826:438472438472439428957Gallibacterium anatis UMN179 chromosome, complete genomeputative transporter YfdV1e-41170
NC_003143:3191246:320863632086363209592957Yersinia pestis CO92, complete genomehypothetical protein3e-37155
NC_005810:3021913:303961730396173040573957Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-37155
NC_008150:2574794:259220925922092593165957Yersinia pestis Antiqua, complete genomehypothetical protein3e-37155
NC_008149:1440371:144037114403711441327957Yersinia pestis Nepal516, complete genomemembrane protein3e-37155
NC_010465:1427170:142902614290261429982957Yersinia pseudotuberculosis YPIII, complete genomeAuxin Efflux Carrier3e-37155
NC_004088:1510467:151046715104671511423957Yersinia pestis KIM, complete genomehypothetical protein3e-37155
NC_009381:2491427:250885525088552509811957Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-37155
NC_014029:3171627:317162731716273172583957Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-37155
NC_017154:2876545:289384828938482894804957Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-37155
NC_017160:3094768:309660230966023097558957Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-37155
NC_017168:2535732:255309825530982554054957Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-37155
NC_017265:2940539:295913329591332960089957Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative AEC family malate permease3e-37155
NC_010159:409500:427333427333428289957Yersinia pestis Angola, complete genometransporter, auxin efflux carrier family3e-37155
NC_009708:1403434:140343414034341404390957Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeauxin efflux carrier family protein9e-37154
NC_006155:3333303:335022533502253351181957Yersinia pseudotuberculosis IP 32953, complete genomepossible AEC family malate permease8e-37154
NC_010634:3250810:326768532676853268641957Yersinia pseudotuberculosis PB1/+, complete genomeauxin efflux carrier8e-37154
NC_015977:935798:961728961728962681954Roseburia hominis A2-183 chromosome, complete genomehypothetical protein1e-26120
NC_011894:6888562:691998369199836920912930Methylobacterium nodulans ORS 2060, complete genomeAuxin Efflux Carrier2e-24112
NC_016077:998741:105360010536001054541942Acidaminococcus intestini RyC-MR95 chromosome, complete genomemalonate transporter1e-1894.4
NC_014363:1344768:136534813653481366313966Olsenella uli DSM 7084 chromosome, complete genomeAuxin Efflux Carrier2e-1790.1
NC_016818:2836851:287455528745552875472918Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative permease1e-1480.9
NC_012918:356019:358878358878359795918Geobacter sp. M21 chromosome, complete genomehypothetical protein2e-1376.6
NC_009654:3980289:398716639871663988113948Marinomonas sp. MWYL1, complete genomeauxin efflux carrier1e-1067.8
NC_015563:3203012:322739932273993228352954Delftia sp. Cs1-4 chromosome, complete genomeauxin efflux carrier1e-0964.3
NC_015873:1411718:143476914347691435725957Megasphaera elsdenii DSM 20460, complete genomemalate permease8e-0961.6
NC_015224:279037:298431298431299390960Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein9e-0961.2
NC_010002:4326509:4344161434416143452641104Delftia acidovorans SPH-1, complete genomeAuxin Efflux Carrier1e-0860.8
NC_009785:387910:405683405683406630948Streptococcus gordonii str. Challis substr. CH1, complete genomemalate permease2e-0756.6
NC_015137:1207769:122491712249171225861945Burkholderia sp. CCGE1001 chromosome 2, complete sequenceauxin efflux carrier6e-0755.1
NC_009715:873280:875381875381876289909Campylobacter curvus 525.92 chromosome, complete genomeputative integral membrane protein9e-0754.7
NC_012778:1778654:178487717848771785833957Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-0654.3
NC_014328:2203437:221819022181902219128939Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative permease3e-0653.1
NC_014328:1263139:128015012801501281073924Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative permease5e-0652.4
NC_011661:1807101:182955918295591830467909Dictyoglomus turgidum DSM 6724, complete genomeAuxin Efflux Carrier9e-0651.2