Pre_GI: OUP Neighbours

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Query: NC_002505:168532 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

D: 38.3098

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Number of Neighbours: 37




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014225:1403007*Waddlia chondrophila WSU 86-1044 chromosome, complete genome75.4902 %Subject Query24.6231
NC_008783:145305Bartonella bacilliformis KC583, complete genome75.4626 %Subject Query26.0032
NC_005140:340000Vibrio vulnificus YJ016 chromosome II, complete sequence77.0466 %Subject Query26.4713
NC_004347:4211241*Shewanella oneidensis MR-1, complete genome76.5135 %Subject Query26.7814
NC_009052:3229775Shewanella baltica OS155, complete genome76.3511 %Subject Query27.5596
NC_005140:1820970Vibrio vulnificus YJ016 chromosome II, complete sequence80.4381 %Subject Query27.8788
NC_011753:3088952*Vibrio splendidus LGP32 chromosome 1, complete genome76.5993 %Subject Query27.9102
NC_005140:960261Vibrio vulnificus YJ016 chromosome II, complete sequence78.367 %Subject Query28.0411
NC_006370:166000Photobacterium profundum SS9 chromosome 1, complete sequence75.3156 %Subject Query28.1736
NC_008577:3485878Shewanella sp. ANA-3 chromosome 1, complete sequence75.9191 %Subject ←→ Query28.3804
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome77.7175 %Subject ←→ Query28.9383
NC_009997:4091371Shewanella baltica OS195, complete genome75.2849 %Subject ←→ Query29.1038
NC_004460:1618892Vibrio vulnificus CMCP6 chromosome II, complete sequence77.7053 %Subject ←→ Query29.7179
NC_008322:722612Shewanella sp. MR-7, complete genome75.6832 %Subject ←→ Query30.0553
NC_009654:4624459Marinomonas sp. MWYL1, complete genome76.3113 %Subject ←→ Query30.4991
NC_004460:973738Vibrio vulnificus CMCP6 chromosome II, complete sequence80.5576 %Subject ←→ Query30.5138
NC_008321:3232000Shewanella sp. MR-4, complete genome75.2175 %Subject ←→ Query30.7332
NC_008321:458811Shewanella sp. MR-4, complete genome75.6955 %Subject ←→ Query31.5836
NC_004459:1794540*Vibrio vulnificus CMCP6 chromosome I, complete sequence80.6097 %Subject ←→ Query31.6148
NC_005139:2731623*Vibrio vulnificus YJ016 chromosome I, complete sequence75.6097 %Subject ←→ Query31.989
NC_015276:855150Marinomonas mediterranea MMB-1 chromosome, complete genome75.3983 %Subject ←→ Query32.162
NC_009654:4716417Marinomonas sp. MWYL1, complete genome76.9914 %Subject ←→ Query32.6103
NC_002505:980595Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete78.652 %Subject ←→ Query33.004
NC_008321:1636148*Shewanella sp. MR-4, complete genome75.6863 %Subject ←→ Query33.2895
NC_004460:1313468Vibrio vulnificus CMCP6 chromosome II, complete sequence78.9859 %Subject ←→ Query33.3414
NC_015559:3645181Marinomonas posidonica IVIA-Po-181 chromosome, complete genome77.261 %Subject ←→ Query33.4326
NC_002505:2537655*Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete80.4626 %Subject ←→ Query33.5512
NC_008322:1708631*Shewanella sp. MR-7, complete genome76.4001 %Subject ←→ Query33.7062
NC_002935:1378566*Corynebacterium diphtheriae NCTC 13129, complete genome75.0888 %Subject ←→ Query34.6555
NC_008577:1690946*Shewanella sp. ANA-3 chromosome 1, complete sequence77.1293 %Subject ←→ Query34.9418
NC_010554:2646806Proteus mirabilis HI4320, complete genome80.3002 %Subject ←→ Query35.3988
NC_004459:1679335*Vibrio vulnificus CMCP6 chromosome I, complete sequence76.7341 %Subject ←→ Query35.7874
NC_008321:3964414Shewanella sp. MR-4, complete genome75.1869 %Subject ←→ Query36.1551
NC_010995:4525119Cellvibrio japonicus Ueda107, complete genome75.3554 %Subject ←→ Query36.7553
NC_002506:207097*Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete83.2169 %Subject ←→ Query37.898
NC_009092:1441813Shewanella loihica PV-4, complete genome78.3824 %Subject ←→ Query42.2476
NC_010611:240839Acinetobacter baumannii ACICU, complete genome76.6422 %Subject ←→ Query48.2217